Array 1 84947-86195 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR699929.1 Faecalibacterium prausnitzii strain P9241, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 84947 28 96.4 33 ............T............... CAAAGTTCAAACACACCATTATCTTCAAGGAGG 85008 28 96.4 33 ..............T............. CTGGGAAGAAGCCGGATATATGCAAAGTATCAT 85069 28 96.4 34 ............T............... CGACCCCACATCCCCGGCAAGCTTTATCGGTGGC 85131 28 100.0 33 ............................ CTACACGGCGTGGCAGAATTTCCTTGCCAACCA 85192 28 100.0 33 ............................ TAACCTGACCTTGTACCCGGGCCGGGAGCGTGA 85253 28 100.0 33 ............................ TGAGGCCTTCGACGTTCGGAACTATGCGACGGC 85314 28 96.4 33 ........T................... CGGCACAGGCACGGAGCTGTATAACCGGGCCAA 85375 28 100.0 33 ............................ TACTCCAATGCGGGAATGTGAATACTGCATTGC 85436 28 92.9 33 ........T..T................ CTTCGGGCTGCCATCCAGTTCGATGTAGATGTA 85497 28 96.4 33 ..............T............. CAACTTCTACGGCTTGCAGCAGCTGGCCTTGAA 85558 28 96.4 33 ............T............... CAGCGGATACAGAACGCCGAACTGGAACAGCAA 85619 28 100.0 33 ............................ CTTGTAATGCAGGCCGTCATCGTCGATATCCGC 85680 28 96.4 33 ............T............... AAGGTTCTTGTAGAAATGGCTTTCGTCCACGAA 85741 28 92.9 33 ..............T....A........ TTTCACGGATTTGATGACCCACCGATAGCTGCC 85802 28 100.0 33 ............................ CAACACAACCCGTTGCATGCCGCTGTACAGCGT 85863 28 100.0 33 ............................ CGACCTGGTGGCCCTGACCGAGGCTGTGCGGAA 85924 28 96.4 33 .......................A.... CGAGCCACAGTTCTTTGGTGCAATCCGTGTAAT 85985 28 96.4 33 ..............T............. TGAATCGGAACTGCCGCCGCAAAACAGAAAAGG 86046 28 96.4 33 ..............T............. CTATCTGCCCCAGTATCAGCGCACCGGCCCCAC 86107 28 96.4 33 ..............T............. TACCTCGGGAATGCTGGATATCATGCCGGAATG 86168 28 85.7 0 ............T..........TC.A. | ========== ====== ====== ====== ============================ ================================== ================== 21 28 96.8 33 CTTTTCCCCGCCCACGCGGGGGTGATCC # Left flank : TGTACCTGCTCCTGCTCAGTGAGGAACGGCCGGACCTGACCGCCCTGTGTGCGCAGTTCGGCACCGGTGCGCCCCCGGAGACCCGGCCCTATGACCCGCTGCTGGAACGGGTGACAGCGGGCAGCTGCTGGCAGTTCCGCCTGACTGCCAACCCCACCCGCAGCAAAAAAGACTCTGCCGACCATACGGCCCGGGGCACCCTGAAACCCTGCTATCTCGAGGTGGAGCAGGAGGAATGGCTGTGGGCGCAGGCCGCAAAGCACGGCTTTGCCGTCTCGGAGGGGTCCTTCGCAGTGACCCGGAAGCAGACTTATCACTTCAAGAAAAACGGCACCCGGTCTGTTACCCTGCTGGCTGTGACCTACGAGGGCATTCTGCAGGTGACGGACCCGGAGGCCTTCAAGGCCCTGCTGTGCGAGGGCGTTGGCCGGGGCAAGGCCTATGGCCTTGGCCTGATGACCATTATCCACAGGGGAGGAGACCATGGCTGAGATGCCGGG # Right flank : CATTGACAACCCTGCGCAAAAAGCAGATAATAGGTTTATCTTGAATGCAAATGCAGAGCGAGGGAAAGTATATGTTGTATTTTGAAAACGATTACTGCGAGGGTGCGCATCCGGCAATCTTACAGAAGCTGGTGGAGACCAACTTTGAAAAGGTCTCCGGCTACGGCACCGATCCCTATTGCGCCAGTGCGCGGGAGAAGATCCGCGCGGCGTGCGGCGCACCGGATGCCGATGTCTGGTTTATTTCGGGCGGAACCCAGAGCAACGCCATCGTCATTGCATCGATGCTGCGCCGCTGGGAGGGTGTGCTGGCCGCATCCACCGGCCATGTGGCTGCCCACGAGGCCGGCGCTGTCGAGTTCACGGGCCACAAGGTCATCGGTCTGCCGCACACCAACGGCAAGCTGGATGCCGGGACGGTTGAGGACTGGTGCAGGACCTTCTATGCCGATGGCAATGTGGACCACCTCGTGTTCCCGGGCATGGTGTACATCTCCCAC # Questionable array : NO Score: 5.58 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.48, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCCCCGCCCACGCGGGGGTGATCC # Alternate repeat : CTTTTCCCCGCCCATGCGGGGGTGATCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCACACGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,1.01 Confidence: MEDIUM] # Array family : I-C [Matched known repeat from this family], //