Array 1 1062057-1063412 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP038865.1 Vagococcus sp. CF-49 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1062057 36 100.0 30 .................................... TCTTCTGTTGTGTCATACACGTAAACTTTT 1062123 36 100.0 30 .................................... TAATACTAAGATTATGTCGATTGCACAAGT 1062189 36 100.0 30 .................................... CATATTTACCTATAATTTTGTGCTTTTCTT 1062255 36 100.0 30 .................................... TTAAGCGTTCGTTTGAACTCATAACCAACT 1062321 36 100.0 30 .................................... AATATGAGCATTTACTTAATAACAAATGAC 1062387 36 100.0 30 .................................... AAAGCGCTATGTGGACGCTAGGCGCTACAT 1062453 36 100.0 30 .................................... TACCAGTTGCAGCATCACGAACGTACAAAT 1062519 36 100.0 30 .................................... GAAGTCAATGTTGATTATCTGCATAAATTG 1062585 36 100.0 30 .................................... TGATTTGAACCTTGCTAAACCTTACTAAAA 1062651 36 100.0 30 .................................... CATTTGCTTTTACAATCATTTTCTCGCCGA 1062717 36 100.0 30 .................................... GAAAGTGGCTATCAAACTCACATAGAAATT 1062783 36 100.0 30 .................................... CAGTTTCGAAAGCACCGCCACCAATATTAG 1062849 36 100.0 30 .................................... AATCTTCAAAGATACGATCAATCGTTTCTT 1062915 36 100.0 30 .................................... TACTTTCACGCCAACCGAAATAATTCAATG 1062981 36 100.0 30 .................................... GTCGGTTTCGTATCTTTTTGGATAACTCCT 1063047 36 100.0 30 .................................... GCTTTTCTATGTTCTTCCCAATATTTAGAA 1063113 36 100.0 30 .................................... ACTCGTCAAACGCTTGTGACTTGTTTGCTT 1063179 36 100.0 30 .................................... TAGAATTATTTTTTGAACAGCCGGTCATTA 1063245 36 100.0 30 .................................... AAGTCATGATTGGTTTAGCAGCAGTTGCTC 1063311 36 100.0 30 .................................... AGCTTTCAAGACCGCCGTACAGAGCGCAAT 1063377 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 21 36 100.0 30 GTTTTACGATTACTTGAATCTTTAGAGTACTAAAAC # Left flank : CTCTGTATGAGCTAATTCAATTACTTGATATTTCCCACCTGAAATACGTCGTTTATCAAAACCTTCCTCCAATAAACGATCATCTTTTTGACTAAGTTTCACTCCTACATCATACCTAAGCAACGCTGGTTCTATTTGGATGGGATCATCTAATGCTATGCCAATTAATACAGACGTTTCATCAAGATAATGCTTCCTTATCAACGTCTGTTTTACGTCTTCCATTAAGTAATGATTTTCTGTTCCATAGTGTCCTATTCGACGTTTATAGTAACTATCAAAATCTTCTAATTCTATATAGCTCATGTTGTCATCTCCCTTATTATTTGGTTGATGCCGGCTCAACACATTCAGAATAATCTATACTAAAATGAAATACAATAGAAAAAACATCCAATTACCATACGATATGTATAATGACAGGATGTTTTAAATAAATTAAGAATTGATTTACCAAAAGCCACTTACTTCTCTCTTAGTGGTTGTTTTGTAACTGAATT # Right flank : CCTCAAATCCGTCGAAATGCGATTGTAGTATTAATTTAATTCTATAATGTTCGCCTTAAATTATCAATTAAATATTTAATTTCTGGTTCAGATAAGCTAGTTGTATAAAGATAATCATTATTTACGATACCTAACAACTTGTTTAACACTATTAGACTGACTAAATATTGACTATTAATATTCGGAATATCGAAACTCCCAATATAACCAAGCCATTTATTACCTGTCTCAAAAAAATCTTCATATTCAATATATTTAGAAGGATAATTGAACTTCAATCTTTCATACAAAAATTCTAAATCATTTACTTCAAACTTCACGTCATTTAAAATAGTTATATTAGAATTTTCATCCAAAGATAAATATTCTACATCAGAATGTATCATCATAAAATAAAAATTAGGAAATTCATCTGACAATGAACTCATCAATCTGTATAGTTCTAAATATTGCTTTTTAGATAAGAAATTCGGACTATCTTTAACAACTAATAAGATTCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTACGATTACTTGAATCTTTAGAGTACTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-0.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //