Array 1 40395-41399 **** Predicted by CRISPRDetect 2.4 *** >NZ_VWPD01000021.1 Actinomyces marmotae strain zg-325 Scaffold20_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 40395 28 100.0 33 ............................ TGGCGATACTGCCAGGATGAGTATGACCTGGCA 40456 28 100.0 33 ............................ GGAATTCTTCTATGAAAACCCGGTCGCAACTGC 40517 28 100.0 33 ............................ TGACCGTGTCGGCAACAGAGCCCATGAGCCGGA 40578 28 100.0 33 ............................ GGTCACCAGTTTCATCGCGGCCAACATCGCGTC 40639 28 100.0 33 ............................ CTTCTGGCCGGTCTGACCGCCACTACTGGCGCC 40700 28 100.0 33 ............................ CCGCTGTGCATCAGCACTCCAAACACGCCGCCA 40761 28 100.0 33 ............................ CTTCCCGCCCTTAGGACAAAACGCCCGCACCAT 40822 28 100.0 33 ............................ GTCCTCCAGAACCTCGGAGAACTGCCGGTCCAA 40883 28 100.0 33 ............................ GATGCAGATGTTGATGTCGGGTACTCCTATGGC 40944 28 100.0 33 ............................ GGACATGGGACGCAAAGCCGCGATCAAGCGGGC 41005 28 100.0 34 ............................ GGGGATCGTTGAGAAGGCCGGTAGCCAGTACACG 41067 28 100.0 33 ............................ CGGCGGCAGGTCATGCGCCCGCGCCACAGGTCC 41128 28 100.0 33 ............................ CATGCCAACCCGATCCGCAACCTGTAAGGAGAA 41189 28 100.0 33 ............................ GTCCGCCGACCTCACCAGCGGGTGGGAGACGAA 41250 28 100.0 33 ............................ GACATGGAAGGGCCGGCTCCAGGGAGCGGGTGG 41311 28 100.0 33 ............................ CCCGGCCTCGGACCATCCCCAGGGGCGGGCGTG 41372 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 17 28 100.0 33 GTCCAGCCCGTGTAGGCGGGGGTTGAGG # Left flank : CCGGTGCTCGGCGCCGATGGGCGTGGCCGCGACCGGCTTCAGGTGCTGCGTGCCGTGCTCGTGCGTGGCGGGGAGCGAGCTTCTGTCTTGTCGGTGGCGACTCGTGGGGGCGTGGCCAGGATGGGGGCTGCTGAGCCTGGGTCCATGACCTCGTTGCCTCGTGTGATGCGCGCGCTGTGCTCCGGGGGCGAGCGGTGGACGACACTCGTGCCGACCGATGTGGATCGTGACCGCCTTGAGGAGGCCGTCATCGCCGCTGCGGCGCGGAGCGGGTGCCGGGTGCTCGAGGCCGTGCTGCACGACGACCCGGTCGGGGAGATCGGTGTGCCCGCGGACGAGCTCGGGACCAGCAGGCATGTGACAATGGTGGTCAAAGGGAGTCCGTCGACACCGCTCGTCCTGGGAGATGTCATGATGATGCCGGTGGGCGCCGCCGTCGCAGTGAATCCACGACGGCCCTCCGGATGACCAGGGACGCGGAATTCCGCGGATTCCCAAGT # Right flank : AGCGGCTGGCCTGCCCGGGGCGTGTCGCCCAATGGGGGCTGGCTGCCGCCCTCGCTTCGAGAGTACCCGGGCCTGGCCCTAAGTTAACCGGGTTGGGAGCGGAGGAGAGGCGTGGGGCACTTCGGGCTCGCTTCTCACCCGGCGAGGATCGCCGCCAAGCACTCAAGCCAGGTGGCGAGCGCGTTCCACACGCGAGCCACGATTCACCCTCGACCAGGCCGCCCGCGCCCCGCCGCCCCGCCGCCCCGCCGCCCCGCCGCCCCGCCGGCTCGGCGCCCCGC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCAGCCCGTGTAGGCGGGGGTTGAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.40,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [38.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 1 24472-22130 **** Predicted by CRISPRDetect 2.4 *** >NZ_VWPD01000025.1 Actinomyces marmotae strain zg-325 Scaffold24_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================================== ================== 24471 36 100.0 33 .................................... TGCCAGATCGCGTAGTCCCATCCGGCGGCGGTG 24402 36 100.0 34 .................................... TGAGCACGAACCAACGTAAGACGGGAAATCGGTG 24332 36 100.0 36 .................................... GGTCCACTATCAGCCCACCATCAGTGGTGGGCTGAG 24260 36 100.0 34 .................................... GCCGACTCCGCCGGCGACCAGCAGCACCACCGCA 24190 36 100.0 35 .................................... TCCAGAACGTTGTGCGAGTTGATGCGAAAACGGTT 24119 36 100.0 36 .................................... GATGATCTTCTTACCCACATCGGAAAGCATCCCAAG 24047 36 100.0 33 .................................... CTCGCCGACACTGAGCGCCGCTTCCGGCTGCTT 23978 36 100.0 36 .................................... GGGACGCAGAAGGGTCTCGGCGTCCGATTTCCTCAC 23906 36 100.0 37 .................................... GTCTCGGGGCCCCTGGCGCCCCGCTACACCACCGGGG 23833 36 100.0 34 .................................... GCATCGCCGGAACCATATGGATAACGACCCGAGT 23763 36 100.0 35 .................................... CCTGACAAGGATCTCCTTATCGTTTGGGATTCCAA 23692 36 100.0 35 .................................... GGGAGTCCATGGCCGCCGCCATCCACCGGCTCCGC 23621 36 100.0 34 .................................... GCCAGGTACACGACCACCACGCCCCACACCCCGC 23551 36 100.0 36 .................................... GCGCGGGCGATGGGGACGACGAGGGCGGGTTCCAGG 23479 36 100.0 34 .................................... CACCCGCATAAGAGCCCCCGCAGACAGGAGACCA 23409 36 100.0 37 .................................... TCGCCGTCGATACGTCTGGTCGAGTTGAACGCCGGGG 23336 36 100.0 33 .................................... GGCAAACACTCTGTTTGTAGCAGATGTAGCAGA 23267 36 100.0 35 .................................... GAGTCGGGCGTGCGGGTCCAGGTGGAGGCGTAACC 23196 36 100.0 37 .................................... TGGTCACCGATCATCGGCGAGACGAAGGAGACATCGA 23123 36 100.0 34 .................................... GTCGTACCGAGCTCCTGGAGCAGGATGGTCAGGC 23053 36 100.0 38 .................................... CGCATCATCGACCAGTCGTGGTAGTAGAACCACCCCGC 22979 36 100.0 37 .................................... TGGTCGTGGATGAGGGTGATGGTGTCCATGAGCTCGG 22906 36 100.0 34 .................................... GTGTAGGTGCCCTCAGTCTCGTACTTGTACAGGC 22836 36 100.0 35 .................................... CCGTCAGAGTCCGGAGGCGAGAGCTGGGGCGAATC 22765 36 100.0 36 .................................... AGGCGGTATGACGCTCGCGAGATCGTCCAGCCTCCT 22693 36 100.0 62 .................................... ACCCTCGCCGAGTCGTGGGCCTGCACCCTCGCCGAGTCGTGGGCCTGCACCCTCGCTGAGTC 22595 36 100.0 36 .................................... TCGTTGATCGGCGTCTGATCCGTCACGGACACCTTG 22523 36 100.0 36 .................................... GGCCTGATCGAACTCAGCCTGGTTCGTCGCGACGAT 22451 36 97.2 35 .................G.................. CTGGTGGCATTCACGGTAGTGACGACCCTCGTCGG 22380 36 100.0 36 .................................... AGGCGGATCGTGTGAGGTGAGCGCCCGGCTGCTTGG 22308 36 97.2 35 ......................G............. GCGGTCACCCTCGCGTTGCTGTAGGTGTACACTAC 22237 36 97.2 36 ..............C..................... GGGCGGTTGGGGGCACTACATCTGCTCCCAACCGCC 22165 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== ============================================================== ================== 33 36 99.7 36 GTTGCAGTTCCTTCGGGAACTGCGCTTCATTGAGGC # Left flank : TACAAGGGCGTAAGGGTGCGTTGATGCGCGATGATGTGAGGCGAGTGCTCGTCGCCTATGACGTGCCCTCCGACAAGCGGCGCGGCCGAGTGGCGAAGATTCTCCTCAAGTACGGCGACCGGATCCAGTACTCAGTGTTCGTGGTGGACTCCGCGCCAGCGAAGCTCATGCGGCTGCGAGAGGAGCTGAGCGCGGCCGTTGACCCGGATGAGGACTCGATCCTGCTGTGCGACGTCGGGCCGTTGGCCTCGGTCGATGCGAAGCGGTTCACATACGTGGGCCTGACGAGGACCATCACGCCTGAGGGGCCTCTCATCGCCTGACGCGAGCGCTCCGGCGGCACGGGAGACCCGGGGGAGCGCTCGCGTGCGAGGAACGTTGATATCCCAAGGGAGGAGGGCTACGCTACCCTCCAAGCGAGGGTTCGAACCGACTTGACGTCGGCAGCGCTCGCGAAGACCCGTCAGAACCCTTGAGTGCCAGCCGATTCTAGCGGGGCT # Right flank : TCTCCCATTAGGGGAGGGTGGGTGCGTCACCCGTATTGAGGTTGGGAATGGGCGGGGTTTTGGCCCGCTCGGCTGGAGTTCTTAGGGTGGTCTGGAACGTGTTGTCGACTTCCTGCTTGACGTTCAGGTCGTTTCCCTCGAATGGCGTCTTGATGTCGATTCCGATGCCCTGGTGGACCTTTTCTTCCCGGGCGCTCAGCCGCGGCGTCATAAAAGGTTCCGAGCGCATGGTTGCTGGCCACTATCAGGTCTTGTCTGGGTTCAGGCACCACCGGTGAAACCCACGTTGGGTAGCCGCAGGAGTCGGTCGGCTCAGGGGCGTGCCGACTGACGACGTCCAGTGCCGCATGCGGATAACCGACCCAACGGTCAGGCCGGACGCGCCCCCACTCCAGCGGGAAACCTCAATGAGTATGTGAGTGCAAACACGATCCTACTAAGAGGGCGCCGCTGTTGTTGGTGTTATCTAGTAGTGAGTGCGTTACGATTCGCTTGCCCTT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGTTCCTTCGGGAACTGCGCTTCATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.40,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //