Array 1 1574-47 **** Predicted by CRISPRDetect 2.4 *** >NZ_UEXF01000043.1 Thiotrophic endosymbiont of Bathymodiolus puteoserpentis (Logatchev) isolate BPUTEOSOX, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1573 28 100.0 32 ............................ TATTAAAAATGGCATATATGTCAAACCTCCGA 1513 28 100.0 32 ............................ TTTTGCAGTCGACAACTTTTTTAAAGATAGCG 1453 28 100.0 32 ............................ GTCGTTCCTTGCATTTTTATTTTGTTATTTTC 1393 28 100.0 32 ............................ TAATAAAAAAAACCCCCAAAACCCCAAAACCC 1333 28 100.0 32 ............................ GCTAGCTCATAAAAATATTTGGAAAGGTGAGT 1273 28 100.0 32 ............................ TGTCTGGAGCATTAAATCCATAATCAGACTTA 1213 28 100.0 32 ............................ ATTGACTGTTAAAAATTGCGCGTCTAACTGTG 1153 28 100.0 32 ............................ TTTCATTTCAGGGCAGTCGACACCGTGTAGAC 1093 28 100.0 32 ............................ TATCAGAGCAGGAATATTTTATCAAAGACCAA 1033 28 100.0 32 ............................ TCTACAGCGATATACGACACAGGAAAAACTCG 973 28 100.0 32 ............................ TCGGCAACAATGATACTGTCGCCCTTTTCGCA 913 28 100.0 32 ............................ TAGAGACCAAGACTGGCATAAGAACGGCTTAG 853 28 100.0 32 ............................ TGTATATTGAATTGCCCTAATTTTTTCTGTTA 793 28 100.0 32 ............................ AAAGCCACTTCTTCTTGTTCGTGACTAAGAAA 733 28 100.0 32 ............................ TTTTAAAACTGGCACACCGTCAATGTCTGAAT 673 28 100.0 32 ............................ ATATAAATCATTCATTATTTCACAACTGGTTT 613 28 100.0 32 ............................ AAATAAGGTATTTATTATGCTTCCTACTTTTT 553 28 100.0 32 ............................ AGTGGTTGATGATGTCTCTGTGGGTTAGTTGT 493 28 100.0 31 ............................ CACACAGTTGTATCAAGTGGGCAACTGTGTG 434 28 100.0 32 ............................ TGCTGATGAAGACATACCTTATTAAATTATGG 374 28 100.0 32 ............................ ATTTAACAGAGGCACCAACAGTAACCATTTCG 314 28 100.0 32 ............................ ATTTATTATTTAAAAGACTGAATGTTCTCAAT 254 28 100.0 32 ............................ ATATAAATCATTCATTATTTCACAACTGGTTT 194 28 100.0 32 ............................ TTTTATTTGTTTAGTATTACATTTGCGTTTTT 134 28 100.0 32 ............................ AGCAAATATATCACAAAACACTTTATCTGTTA 74 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 26 28 100.0 32 ATTCACCGCCACACAGGTGGCTTAGAAA # Left flank : ATATTATGATGGTAAATGCTGGAATGTTGGCAGAACAATGGGTTGGTCAGGCGTTAGTTACTAGTCAGGATTACTATAAATCGCCTGAATTACATTATTGGATACGAGAAAAAAAATCAAGTTCAGCAGAGATTGATTATGTTATTGCGTGCTCTAAGTATATTGTGCCAATTGAGGTAAAAGCAGGCAAAACAGGTAGCCTTAAATCATTGCATTTATTTATGCAAGAAAAAAAACCCCAATTCGCTATTCGTTTAAACACTCAGCCACCTAACATTTTAAATAAACCTAATATCATATCACTGCCTCTTTATTTAGCCGAACAAATTTGGTGTCTATGTCTAGATGAAGTAGTTGTATAATTTTTTAACCATTAGTTGGTTTCTCTTTAAAAATTATTTATAAATCAATAAGTTATAATAATGATAAAAAGCATTGGTATTTTGATGGTTTTTGTTTTAAGTTATTGTTGCAGTTTATTTTTTTGCGTTTAAAATACT # Right flank : ATCATGGTCTTGTTTTGATACAAAGGTTCGTTCATTCACCGCCACAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCACCGCCACACAGGTGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACCGCCACACAGGCGGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.60,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1308-94 **** Predicted by CRISPRDetect 2.4 *** >NZ_UEXF01000067.1 Thiotrophic endosymbiont of Bathymodiolus puteoserpentis (Logatchev) isolate BPUTEOSOX, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1307 36 100.0 26 .................................... AGAATTATAATTCGTTGAGCACGCGA 1245 36 100.0 30 .................................... ACAAAAACCAACGCACAAGAGCGCTTCTGC 1179 36 100.0 29 .................................... AGAGATACTGAGCTTGGGGATATATTGTC 1114 36 100.0 29 .................................... TGCTGTAATTGCAGTGCCTACAGTGATTG 1049 36 100.0 30 .................................... TTAGTTTTTGGTGAAACAACTGTATTGTAA 983 36 100.0 29 .................................... TTGTGAGGTTTTGGTAATTGACGACATCA 918 36 100.0 30 .................................... TGAAAACGAAGGGGCAAAGATATGAATAAA 852 36 100.0 30 .................................... GGTAAGCTGATGGTATAAGCCATGTTTTCT 786 36 100.0 30 .................................... GAAGATGTTCAGGGTCATAGGTAAGAGTAA 720 36 100.0 29 .................................... TCAACAGGAACTCTAATAACAGCAGACAA 655 36 100.0 30 .................................... TGAATAGTAATCATAATATAACTCCTTATT 589 36 100.0 29 .................................... TAGGCTTGAAACACGCCATAACTTAATAA 524 36 100.0 30 .................................... TAGTAATCATAATATAACTCCTTAACGATA 458 36 100.0 29 .................................... ACTAGAACCGGAATAAGGACTATGTAACA 393 36 100.0 30 .................................... AAGGAGAACGCGATCAGGAAAGTCATAACC 327 36 100.0 30 .................................... TAACAGTAGTATGAACAGAACCAGTAATAG 261 36 100.0 31 .................................... AGAGAATGGCAACTGCAGGAAGCAAAAAAGA 194 36 100.0 29 .................................... GATTCCTGTCACTCCACACAGTTGTATCA 129 36 94.4 0 .................................CC. | ========== ====== ====== ====== ==================================== =============================== ================== 19 36 99.7 30 GTTGTGATTTGCATTTAGGCGATAGTCAGTTACAAT # Left flank : AGTGAGATACACACTAAACGATTAAAAGATTTAGGTATTACAATATCTATGGATGGTAAAGGTAGGGCTACAGATAATATCTGTATTGAGCGTTTCTGGAGGAGCGCAAAATGCGAAAGAATTTATTTAAATGAATATCAATCCATTAGTGATTTAATCACTGATATGGATGATTATATTGAGTTTTACAATCATCAAAGATTCCATGAAACATTGAAATATAAAAAACCAATGGATGTGTATCAAGAAAGTATAAAATTGAATCAGGAAAAGAAGAAGGTCTCTTAAGATGTTCTATATAAGAAATTTTAAAAAGTTGTCAGGGGTTTTGGGGTAATGTAATAGTCAGTTACAATACAGGGTTCCAGTTTGTCTCGTCGAAAAC # Right flank : TAATCCAAAAATAGAAATCAAAAAAACACACAAACCCCAACTGGTATAATGATTTCAACCAAAAAACCGCTTCACCCATTGGGTGAAAACACAA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCATTTAGGCGATAGTCAGTTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 44200-42589 **** Predicted by CRISPRDetect 2.4 *** >NZ_UEXF01000069.1 Thiotrophic endosymbiont of Bathymodiolus puteoserpentis (Logatchev) isolate BPUTEOSOX, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 44199 36 100.0 30 .................................... CCTTTTAACACCCCCCTCCCCCTATTATTA 44133 36 100.0 30 .................................... GTGCTTAAGTGCTCGTCTGATATTAGCGTA 44067 36 100.0 30 .................................... AGAGCAGCAATATTTTATCAAAGACCAAGA 44001 36 100.0 30 .................................... TTAATCATTAGGACGCACAAAGACCACTTA 43935 36 100.0 29 .................................... AGAGATACTGAGCTTGGGGATATATTGTC 43870 36 97.2 29 .C.................................. CGTTTACATCGCGTCTTACAGGCATGTTT 43805 36 100.0 30 .................................... CAACCATTGAGAAAGCAGTATGCTCTTATG 43739 36 100.0 30 .................................... CCCGTAGTTAGAATGTGTCGAAGATACCAT 43673 36 100.0 31 .................................... CAACAGTGTTTGCTTGTGTGCGTATATTGTC 43606 36 100.0 30 .................................... GTTGGTGTTCGGTGAGATAACTGTTTTATA 43540 36 100.0 30 .................................... CAGAACCATAAACATCAGCAAGAGCTTTAT 43474 36 100.0 30 .................................... CTTGTTCGACGGCAGAGTGTACCCAATTCA 43408 36 100.0 29 .................................... ATGAAATAATGGGGTATCTGGCAAAAATA 43343 36 100.0 30 .................................... CATTCGTAAAAGGAAAGTTAAGAAAGACTA 43277 36 100.0 30 .................................... TGAACAAAGGGCTAAAAGAGATATACGACA 43211 36 100.0 30 .................................... CCGAGTCAAATCGCCATATTCACCACAGTG 43145 36 100.0 30 .................................... AGCATAATCATGGTTGCCAATGGTGTGTGA 43079 36 97.2 29 ................................T... AAACCTCCTGCCGCTAGACTTCAAATTAA 43014 36 100.0 27 .................................... TGCAAAAATCAAAAATAGTCAAAAACA 42951 36 100.0 31 .................................... AAGATGCCTTTTATCATTTATCGATTGACAA 42884 36 100.0 30 .................................... TGTGCCAGTATCGAGTATAAGCACTTGAAG 42818 36 100.0 30 .................................... GCAAACGGAAACGACAACCACTGGCTATCA 42752 36 100.0 29 .................................... TAACACCAATTCCTAGCTTACTCGCGATT 42687 36 100.0 27 .................................... GATAATAGAATTATTCAATTTTATATA 42624 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 25 36 99.8 30 GTTGTGATTTGCATTTAGGCGATAGTCAGTTACAAT # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : CACCTTGTCTAAAATGCTTTAATATCAGACTTTTATCATTTTTTCTAGTCAAAAAAATGATAATTGTTCTGGTGCTTTTTCGATAGGTCGGCGTTTTTTTCCGTAAAAAACCTCAATCCGTCCAAATTGTTTATCAGTTATTTTGATAATACGCACTTCGCCGTCTGATGGTAAGTGGACTTTAACTCGATTAATGTGTACTTGAGCATTTTCTTCGCTACTAGAATGGCGCATATATACTGAATATTGCATCATGGTGAAGCCATTTTCAAGTAAGAATTTACGAAAATAGCGATAGTCCCTTTTCATTTCAATGCCATCTGTCGGTAAATCAAACAAAACTATTGTCCACATAGTTTGCAAACCTCCAAACATTATTTTTTTGGATAGACCAGTCGTTTACTTTCTTTGGCAAAATTGCGTTTTAAATCTGCCATTAAATAATGCACAGATATCATTAGTGGCATTTGCTTATTTTTGAATTTAACATTTTCGCTAAT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCATTTAGGCGATAGTCAGTTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA //