Array 1 15985-15323 **** Predicted by CRISPRDetect 2.4 *** >NZ_FTPU01000029.1 Epilithonimonas bovis DSM 19482, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 15984 30 100.0 34 .............................. TCCCAACGGGATTGACATAATGGTATTCTGCCTG 15920 30 100.0 37 .............................. AGGTAATACCCACACAATCCGCCAGCTAAAGCCCCCG 15853 30 100.0 36 .............................. AAGGAGCACCTCAAAAACTAACAGTTCAGAATTTTA 15787 30 100.0 35 .............................. ACATCTCATCGATCTCCTGAGCAATTCTCAGATTT 15722 30 96.7 37 ..........C................... TTTGTACATAATCTGTAAACTTTTTACGAAGATGGCG 15655 30 96.7 35 ..........C................... TGATGGATATCAGCAACGTAACTCAAGCCAGAAAA 15590 30 96.7 36 ..........C................... GTGGTATTAGGTGTAAATGAAATATTATTGGCGAAA 15524 30 96.7 36 ..........C................... GAAGGAATTTTTCAGTTTATCACCTCCGGTATTATG 15458 30 96.7 9 ..........C................... GAGGATGAA Deletion [15420] 15419 30 73.3 37 AGCC.GGAA..................... TATGGTAACGTCATCATTACAATTATTGCAATATCAT 15352 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 11 30 96.1 33 CTTTTAATCGTACAATACTTGAATTGAAAT # Left flank : AGTACAAACCTTTTAAAACCTGGTGGTAGATGTATGTGATTTTGGTATACGACATCGGGGAAAAACGGGTCGGGAAAATGCTTAAACTGTGTAGGCAATACCTGAACTGGATTCAGAATTCTGTTTTTGAAGGGGCTATCACCGAAGTAAAATTAAAAGAACTGCAGTTTAAGGCCAGAGAAATTATGGACATTGAAACCGACAGCTTAATTGTTTTCAAAAGCCGGAACGAAAAATGGCTGGAAAAAGAAGTAGTAGGCAATGAAAAAAATGATTTAGACAATTTTTTGTAGTTGTCGAATCGTATCTTGATACGGGAACGGAGTTCTTTGACTTATCGAAAAAATAAACAAACCTTTATAGAAGCAGCCCGGAGAAGGTTGTCGAAAGTCCGGTAAAAACCGTTTATCGGAGGTCGACAATTTTTGCATCCTTTTTTTTATTATTTTTACAGCACAATACACCTTAAAAAGGCGTTTTTTTAGTCGTCGAAAGCACGG # Right flank : CGTCGGCCGTCATAAAAAAACAAAACCCCGAATATTATTCGGGGTTTTCTATTGATAGAATTATTGATTAATTCTTGATGAATTTAGTTTGAGATTTCTCTCCGTTAGATTCGACAGTTAAGATGTAAACGCCTTTTGTTAATTTAGAAACATTCACTTTTCCGTCTGTTATTCCTTGGTTTACCAATTGACCACCAACCGAATAGATCTCGAACTGAGCTTTTGAAGATACATTAGAAATATTAATGATATCTTTTGCTGGGTTAGGATACACATTTACCGAGTTTTTCTTAACATCAGAAACGGCTAGCTGACCAACGTTCAGAGTATAATCTTCTACCTGTCCATAATCGGATGTACCACAAGGAGTAGCGTTAGGTCCTGATGTAGAATCGTGAAGACGTACTCTCATTCTTGTTTGTCCTATTTTTGCAGTAGCAGGTATTGCAATACTTCCTGTCCATGGAGATTTCTTTGCAGTTGTTACCAATACTCCCTCA # Questionable array : NO Score: 5.64 # Score Detail : 1:0, 2:0, 3:3, 4:0.80, 5:0, 6:0.25, 7:-0.20, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATCGTACAATACTTGAATTGAAAT # Alternate repeat : CTTTTAATCGCACAATACTTGAATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //