Array 1 1537755-1538541 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP032364.1 Lachnoanaerobaculum umeaense strain DSM 23576 = CCUG 58757 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================================== ================== 1537755 30 100.0 38 .............................. AATCCAAACCACCTATTAAGGATCACAGCAATAACAGG 1537823 30 100.0 38 .............................. AAGCTTGTCCAACCATTGAAGTCTATATTCATATTGGC 1537891 30 100.0 36 .............................. ATATAGCTAAAATATTTTGAATAATACTAGCTATAA 1537957 30 100.0 38 .............................. TCAGCTACCGGAAACAACTTCCTTGCTTCTTCTTGATT 1538025 30 100.0 37 .............................. TATTCCAGAACCTGCGAGTAGCTCGTCCCAAGTGATC 1538092 30 96.7 42 ..G........................... TATATGATATTGTCGGAGTTATTATCACGGACATAATAACTC 1538164 30 96.7 47 ..G........................... AGATTTACTTTAGCCATTTCCTTATCGGTCTTTTGAAGCCCCTTTCC 1538241 30 100.0 40 .............................. AGAGCTAGTAACAAATATCTGCATTATCGGCACTTTTATT 1538311 30 100.0 35 .............................. AGTCACTATGTTGCTGAGGCTTTCATTCATCCCTA 1538376 30 96.7 40 ........A..................... AAAAATCATCTTTTCCCTTAACTGCTGGAAATTTCTCTTC 1538446 30 100.0 36 .............................. ATAAGTATCATGGTGAATACATTTGACGGTGTAATC 1538512 30 80.0 0 .......................CACTCC. | ========== ====== ====== ====== ============================== =============================================== ================== 12 30 97.5 39 GTAAGTACCTTACCTATAAGGAATGGAAAC # Left flank : ATATTTGCTATATTCCTCCTTTACAAACTCATACAAGCTCCTATAATACGGCTTTCTAAACTCAGCACTGAGTACTTCCTTCCACTCTCCGGTCAATTCACTCATATAGAATACCCCGATCATCTGATTTTATTGAAAGATTTAGCTAAAATATATGTCCTCTTTTATAAAAAATAGGTCATATACAGAAGTATATAACCTATTCTATCATAGCTAATTGTCCTATACAAGGTTTTAAAACAATCGAAGTTATAAATCGATGACGTCTTTTTTATCATATTTTTTTGACATGTAAATAAGGTGATGATTCTATATCTTCTATAGTAATATCTCATTTATAAATCAAAAAGTCTGTCGCTGATTGTATACAATCCTAACACCCCGGAAAGCCCCATTTTAAGCCATTCTTAAAAATAGATTGACAGACTTTTTCGCCTGTAATACAATGATTTTAGGTCAAAACAAGAGTTTTCACCTATCACAATGGCTTAAATGCAGGT # Right flank : CACCTATCAAGGAAAACTCCCACCTATCTAGGCTGGGATAACAAAATTACTACAAGGAGCAAGAGATGTTCGTCATTGTCACCTATGATGTGAATGCTAAACGAGATCCTAAGGTGATGAAAACTCTCAGAAAATACCTTACACATGAACAGCGTTCAGTATTTGAGGGGCTTATCACACCAGGACGACTAAAGCATCTAAAAGAAGAACTTAAAAGAATTGTGGATGTTTCTGAGGACTGTATTAATATTTATTCTTTGGAAACTCTTAGATATTCCAAAAAAGAAAGCATTGGAAAACAGGTGTACCATGGGAACATACTATAAGATATCTTATGAAAAAGCTTACAATGGCAGATATTTTTATCCCAGAACAGATTGAAGAAGCCCTATCTCATCTGTCTACCAAAAAAGATACTTGTGGAATAGATGGACTCTATCTTTCTGAATTAAGAGATGATTGGAATATTAATGGAGCTAGATACCTTTCTCTACTGCGTG # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAGTACCTTACCTATAAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.20,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 1543201-1543930 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP032364.1 Lachnoanaerobaculum umeaense strain DSM 23576 = CCUG 58757 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================================================= ================== 1543201 30 100.0 47 .............................. TTAATAGACCGCCTTCTATTTCTGTCTTGACTGTGACATACTTTTCT 1543278 30 100.0 55 .............................. TTATCAGCACGTTCGTTTAATTCAACACCGGTGTGAGCTTGAACTTTTATGAAAT 1543363 30 100.0 35 .............................. TGGTAGCGTTACACACCTGTCCAACTGTTACGGCG Deletion [1543428] 1543428 30 100.0 37 .............................. AATATTTTTACACAGACTGTTCATATAATCTTGGGTG Deletion [1543495] 1543495 30 100.0 49 .............................. GATTTCTCAATAATTATTATGAAATTATGAATTTTCCGTAAGAAATAAG 1543574 30 100.0 37 .............................. ATAATCTTCACTTTTCTTAGTCTTAGGCATAATTACC Deletion [1543641] 1543641 30 100.0 52 .............................. ATTTTGGAATAAGTTGCGTCTGAGCATAAACTTTTATATATATCCTGAACAA 1543723 30 100.0 47 .............................. AAAACCTATGCACTTTAGTTCATAATATCACCCGAAGCTTGCTGCTG 1543800 30 100.0 71 .............................. ATTACTGATTTTTCATATTGAAGTTCAGCGAGATTACAGATAATTTTTACTGTATTTTCATCCATAGAAAT 1543901 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================================================= ================== 10 30 100.0 48 GTAAGTACCTTACCTATAAGGAATGGAAAC # Left flank : TATCAAAGCTTATATAACATAATTAATAATAAATATCAGCTATCCGAGTGTCACATACAGGAGTGCCTGTCTATTCTTCTATCAATAAACTTCAAAACCAAAAGTCTGTCGACCTCATTTTTTGACCGTATGCATTTATATGTGTGTGCCATACTTTTGTATGATACTTGTATGAGTTTTGTATGTGTGCTATTATTTTATTCTTTTTTGTTTCTAATATAAAATATTTTTATTCTGTTTTTAGTAGTATATTTATATTATTATCAGATAACAGCGATATTATTTTGCTTTATCACTCTATTTTTGCTACAATATATACACTTTTTTATAAGTAATTATGAATAGAAAAGTATGTCACTGATTGTATACAATTCCAACATCCCCAAAAGCACCATTTTAAGCCATTCTCAAAAATAGATTGACAGACTTTTTGTACTGTAATACAATGATTTTGGGTGAAAATGAAAGTTTTTACTTATCACAATGGCTTAAATGCAGTT # Right flank : CGATATACAACTCAACAATCTGGTCGATTGTGAAAAGGGGATGTGAAAAAACTCTATTGAGTTTTTTCGCATCTCCCTTTTTGCAATTATTGTGTATAAATGACTGAAATCATACGCAAAAAAAGCGCACTCCCCCTACCCCATAGAAATTCTTTTTTGAATCTATGCGGAAGTTCTGTTTCTTGTCTTTTTTTTCTGATATTTATATAAATTATGGCCTATCGCCACGAGTAAAACTTCCAGTTTGACTGAATGAATACCTCTTCTGACAATTCTCTTGTACCAACGGTCGCTTTTCATAATTCCGAAAGTACCTTCTGCTTGTATCGAACGGTTCATTCGTAATAACGCACCGTGGATACTTTCCAGGTTTTCGATTACTTCCCGGTGCATGGAAGTTAGTTCCTGATTGATCCTAACGGTTCGATTCTTATCTGTCTTCTTACATTTCTTTGCATATGGACATCCGCTACAGTCTTCACATTCATACAGTTCTTCCT # Questionable array : NO Score: 2.82 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.43, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAGTACCTTACCTATAAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.20,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 3 1545803-1547779 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP032364.1 Lachnoanaerobaculum umeaense strain DSM 23576 = CCUG 58757 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================================= ================== 1545803 30 100.0 38 .............................. AATAATTATTCTTCTTTAGCTGTAGATGTAAAGAGATT 1545871 30 100.0 39 .............................. TTGATGGTCTAACACTCATAACTAACACCTCTTATTATT 1545940 30 100.0 40 .............................. TAAAAGGCTTAGGGTATTCATTTTTGGAGCTTTCAAAGCT 1546010 30 100.0 46 .............................. CTTCTGCCTTAGCGGCATTGGCCGTGATTACGCTCACGATATAATA 1546086 30 100.0 40 .............................. CAGGCTTATAAAGGAAAAGTCGATTAGTAACTTCCCAAAT 1546156 30 100.0 38 .............................. ACAAGGAATTCTGCCTTTTCTAAATCATTCTTTTCCTT 1546224 30 100.0 57 .............................. GATATTATTGAAGTGATTACTGATAAAATTGGCTCCGGAGTATTGAAACCTGCTAAT 1546311 30 100.0 41 .............................. TTGTTTGTTAACAAAATTATCATCATTATCATCATCATTAT 1546382 30 100.0 38 .............................. ATTCTCTCATTGTTGTTCTTGAATGCATTGCCTATTAC 1546450 30 100.0 41 .............................. TATACATTGTCCCATTACTTCCAACTAATTCAAACTTAAAC 1546521 30 100.0 47 .............................. AAAACCAAGTCTCCTTTCCTACTACATAATCGGATGCAAAATACTGA 1546598 30 100.0 38 .............................. CATAGCCGTATACAGAAATAGGTGAGTAGTTGCCGAAT 1546666 30 100.0 41 .............................. AAAGGGTAACGTTGTACACCTAAGTAACCTTTTACTTTCAT 1546737 30 100.0 40 .............................. TCTTTGTACTTACTTATAAACTCAAATATGAATTTAAAGT 1546807 30 100.0 37 .............................. AGTTGAAAAAGAAAAGATTTACTAGCCTTCCTGACCT 1546874 30 100.0 37 .............................. AGTCGTCTTCGGATCCGATGATTCCCTTTTTGAAACT 1546941 30 100.0 42 .............................. GCCATCGGTATCGATGATAAGATTGTGACTCCAATAGTCACT 1547013 30 100.0 36 .............................. AAGATGATTTTGATATATCTGATGATAAATCTGATG 1547079 30 100.0 48 .............................. TTTGTTACCCATTTTGATGCATCACTATATAATTCTTTGTTTTTTTTC 1547157 30 100.0 48 .............................. ACTATTACATATTCGTTTCTTTTTCATTTTTTTATCTCCTTTAAAAGA 1547235 30 100.0 36 .............................. TTATCAATCATTCCATCTTTATCCAAAGCTATCTTA 1547301 30 100.0 36 .............................. ACGCCCTTTTTATTTCTTTTCATATATCTCTCCTTT 1547367 30 100.0 51 .............................. TTTTATGCCTGTAAGATATGTTGAGAATATTGATGCCGCCATTACAATCCA 1547448 30 100.0 44 .............................. GAAAATACTTATATACTTTTTGTCGTATCGATTCTATGTCTTCT 1547522 30 100.0 46 .............................. AGTTAGGACAAGCTACTGATACAGAGTAGAATTCTCTGTCGTCACT 1547598 30 100.0 43 .............................. TAATTATAATAGCTATTATGTTGCTTGGGACTTCATTAATCCC 1547671 30 100.0 49 .............................. ATTTATAGAGGCTAGTTTCAGATAAGCAAGATCATTCTTAAAAGGCAAA 1547750 30 76.7 0 ...........T............ACCTTT | ========== ====== ====== ====== ============================== ========================================================= ================== 28 30 99.2 42 GTAAGTACCTTACCTATAAGGAATGGAAAC # Left flank : TGTTTTCAATCTTATCTTTAAGTATTTTATTGATGAAATATCCAAAGGTTCTGTATGATGGAGTCCGGTTATCCATGAGATACATGAACCTGATATTAACTTTGCAGTTGTCTTCCAGTTTTCTCAGAGAGCAGTAACCGCTAGTCATAAATCCGAAAAGTACTGTTTTTAACATGTTGACCGGATTATATCTGCGTCGTCCGGTTATGTACTCCGGAATATCCGTCAGATACTTGTTTAAATCGATTCCTCCTATCAATCTGTCAAATGTTAAAACAGGATCCAGCAGATCCAAACAATCTGAAAAAAACAGTGGTAAATATCCTTGTTTTGAATTACAATAAGTGTTGGGTAAATTTTTCATTGCAAGTTAATTTTACCACAAAAATAGGACCTTTCGCATGAGCGGATGGTCCTATTTCTTTTAGGGACTTATTTCACAGCCCCTATAAGGAATGGAAACCTTAATTTCTAAAACACTTGTTGCCATATTTGCTCCT # Right flank : TCCCTTTATACTTTGATATCTTCTTTGGGATTTTCCCTACCTTTTAGGCATAAAAAAGACAGTAGCATTATTTCAAATGCTACTGCCTTTTTACTTTATCTATATTCTATTTTCTTTTCTTATACTCTCTACCTCTTCATTTATTCCTCTGATGTCTATTTCAAAGTCTTTATCTGACTTCTTATCTATACCCTGTCTTTTAGAATCATTTACATTAGAGTCAGAATGATACTTTTCTCCATCATCTGGCAAATGGACTGAAAAGGGTATACCTTTTTGTATAATTATTTGTTTTAGACACATTTTAAGAACTGTTGTTAAATCAATACCCAACTGATTGCAAATATTTTCAGCATCAATTTTTAAATCATGATCAATTCTAAACTGTATCAAAGTATTTTTATTCAAAACGCCTCTCTTTCTATTTACTAAACTCCTTCAAATCTAAAATACAGTTTTATATGTTTTTTAGATTCTTCAAGCATACTCTATAAGCTGAA # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAGTACCTTACCTATAAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.20,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 4 1558094-1559135 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP032364.1 Lachnoanaerobaculum umeaense strain DSM 23576 = CCUG 58757 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================================== ================== 1558094 30 100.0 41 .............................. ATCTCAGACTACTGTCTCCCCACGCATCTCTTCCTTCTGGG 1558165 30 100.0 42 .............................. AAAGCTTCATTGCTACAATACATAACCCTATAAGGACTAATA 1558237 30 100.0 43 .............................. AATTAACAACTTCCGAAACATCAGACTCCTCTGGGTCAAAAGA 1558310 30 100.0 38 .............................. CTAGCCTTCCTGTCCTGAAGCGTCTGCCTTAGAGGAGT 1558378 30 100.0 38 .............................. TTTTCTGTCAAAGATATCCAACCGACTCTGCGCTTACT 1558446 30 100.0 41 .............................. TGTCGCTCCGACTCCTTGGATTTACTATTTGCTCATATAGA 1558517 30 100.0 47 .............................. AATACGTTGGTTTTTACTACAGTTCCGTCAGGATTGCGTTTTTCAAC 1558594 30 100.0 40 .............................. AAAACTCATCGGACGAAATATCCGATTTTGTATCTCCAAC 1558664 30 96.7 41 .......T...................... TTAATCTTTCCAGATGTCACTCTGACCTTTGCCACATCTTG 1558735 30 100.0 47 .............................. GCTTCAACCATTTTAATTACTTCTGAGAATGGTTTATCCTGCATATT 1558812 30 93.3 44 .......G........C............. AATCTTAAAACAAACGTATAAAACATTTTTAGCAATCCTAAAAC 1558886 30 96.7 45 ....T......................... TTCATTGTCCTGTCTGTTATATAGCAGCAGGTTAGAACCCAAATA 1558961 30 96.7 39 ........................T..... TTTTTGATTAAAGTTGTTAACTTCAATCCTTTTCCTATA 1559030 30 100.0 45 .............................. GGGTCTGGATCATTGCCTGGTTTAGTGGGCTTTGTTTGATCTGTA A [1559051] 1559106 30 76.7 0 T.A.............C.....C.AA...A | ========== ====== ====== ====== ============================== =============================================== ================== 15 30 97.3 42 GTGAGTACCTTACCTATAAGGAATGGAAAC # Left flank : AAATATTTCTATGCAAGTGATAGTATAGTAGATTTCTAAGTGATTTTTGCTTTTATATTAGACTAACTAAGTATTTATTATGTAAATAAAAAGTCTGTCGACCTCTAATTTTACTTTTAAATGTGTAATTACATTTACATACTATAGTATGTGTTTGTAATTACATAATATATTCTTTTTTGCTTGATTTTTTATAGTATTCTGATATATAAATTCTCTAGAGTCTTACTTGGTATAAATTTGCTGTTTTAAATGGATTTTTTCATAAATAGTACTATATTTTTTGCTTTAATATGCTATTTTTATATCAATACTTACAATCATTATTTTTATATAGCAAAACAAAAAAGTCTGTCACCGATTGTATACAATACTAACACCTCAGGAATCCCCATTTTAAGCCATTCTTAAAAATAGATTGACAGACTTTTTCACCTGTAATACAATGATTTTAGGTCAAAACAAGTGTTTTCACCTAACACAATGGCTTAAATGCAGTT # Right flank : AGGAGCTGTCGGGAAATACTGAATTTTAATCCCTACAGAACAAAATAGAAATATCCTGACAAGTACAAGGCATTTTGGCTTTGTGACTTTGTCAGGATATTTTGTTTTTCTATTATGCTGTCTATTTTTGGGCATAAAACCCCCTTGGCTGAAATTTTGCTTTTGCATTTTTTACTATGCGGTTTTCTCCTGTGGTTTTCCTTCAAATTTCTTTAGTTTTGCGTAGAGAAAACGATGATATTTGTTTATATTTCTTCCTATCGCAAAAAGCATAAATTCTTTATATACCTTATCTGAAGAACGATAGTTAAAGCGTCGGAAATCTTCATTCTCTTTAATATCTCCAAAATGACCTTCCGTTTGAATAGACCGTGTCTGTCGTTTCAGAATACCTTTTTCACTCTGTATGTTAGCATGTGATTTCTCTCGAAGCTCTTCCCATACTTCATTGATCTTCATCACTTTGTTCTTATCAACATCTTTATCAGGATTATATTTGT # Questionable array : NO Score: 3.12 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGAGTACCTTACCTATAAGGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.20,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 5 2272033-2271630 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP032364.1 Lachnoanaerobaculum umeaense strain DSM 23576 = CCUG 58757 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 2272032 36 100.0 38 .................................... TCAAATTCAAACTTAATGGTTTCTGTTCTGAAATTATC 2271958 36 100.0 38 .................................... GAATGCTGTATTGCCGTTAAACATAAAAATTCTCCTTC 2271884 36 100.0 38 .................................... TCTTTCACTTGTTCGCAACACAAGCTCTATGTCAATTC 2271810 36 97.2 38 ..............................A..... TCAAACCAATAATCACTATGAGAAAAATGGGTATTAAG 2271736 36 100.0 35 .................................... TAGCCGCAACCGCCTCCCCGTTGGAAAGGGCTTCC 2271665 36 75.0 0 .......G..AC..................TATTTA | ========== ====== ====== ====== ==================================== ====================================== ================== 6 36 95.4 38 GTTTACAAAAGATAACCCCGATAAGGGGACGGAAAC # Left flank : AATATTTCATTAGCATATTGTGATAACTGTGGGTATCAATGGAACAATAGGGGGTCTGATAGACCGGATACTTGTCCTAGATGTGGCAAAAAGGAAATGACAATGATAGATAGAATGTGTGGATATATAGCCTTTACAAAAATTCATGGCAAGTCCAGGCTAAATGATGCTAAGATGGCAGAGATACGAGATCGTATATCAATGTAGAACTTTTTGATTAGATAAAGTAATAAATACTTGGATAAAGCATAGTCATATGATAAACTAGTGTAGTCTTAGAGTGAGTCTGAGATGATTTAATAAATATTTTTTGTTATATATACTTTAGCGTGTATTTATATTCAGATTTTTGTGATTTTGAGACGGTCCTTATAAATAAAGGCTTTACAGCACTTGATGTAACAAATATTACACAAAATCTACTGAAAATCGATTGTTAGATTTTAGGCACGCTAAAGCCACTTTAAAGCCTTGTGTTATAAGGGTTTAGAGGGGGTAGG # Right flank : AGAATATTGTTATTGAAAAATATTTATATTCATCATAAAATAAAGCCAAGTGAATAGAACTTATTTTATTTCTATTTTTATTCTCAAATTTTATTTTTAAAACAATTTCTATTAAATCAAATCAGTAATATTATAGGGAGGTCGTGTGAAGGGCAACATGGAAAAAGATATTACACAAAAGACACTTGAAAAGTATAATGATGTATTCGCAGATATTATAAATGTGTTACTGTTTAACGGTGAGAAAATAGTAACTGAAGACAGCTTGATAGATGCACTGCCGGGAAGTACTTTAAAGATGGATGGCAGGATAAGGACACAGTATAGGGATATTGCAAAATATTGGCATAACAGTAAGATAAAATTATCAATGTTCGGATTGGAGAATCAGACAAAACCGGAAAAGAGAATGCCGCTTAGGGTCTTTGGATATGACGGAACAGAGTATGTTAGGCAGGCCAAAAAAGAGAATAACAAAGAAGTACTTTATCCTGTGATTA # Questionable array : NO Score: 3.03 # Score Detail : 1:0, 2:0, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTACAAAAGATAACCCCGATAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.30,-7.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //