Array 1 940252-941542 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP066041.1 Streptococcus oralis strain FDAARGOS_1075 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
    940252	    36	 100.0	    30	....................................	TCAAACGATTTAATTCCTTGTTAGGCAACG 	
    940318	    36	 100.0	    30	....................................	AAGCTGATGCCGTCGCATTACCAAGCGCTA 	
    940384	    36	 100.0	    30	....................................	TTGTCGCAATCCCAGACCATTATGTCGCCC 	
    940450	    36	 100.0	    30	....................................	CTGCGATTATCCAAGCTCTTCGAAATGCTA 	
    940516	    36	 100.0	    30	....................................	AGTAAGTATATTCACCAAAGCACACGATAC 	
    940582	    36	 100.0	    30	....................................	GAAATTTCTCCGTTACCTTGTAGCAAAGTA 	
    940648	    36	 100.0	    30	....................................	AGTAGGATCTACGACATGGCTACCGTAATC 	
    940714	    36	 100.0	    30	....................................	AGTTTAGAGACTCCCTAATGCCCGGTGATT 	
    940780	    36	 100.0	    30	....................................	TGTATTGGTGAGCGTACTTAATGAACGATT 	
    940846	    36	 100.0	    30	....................................	TCAAAAGTTGCGAGGGGAGGCCGCATGGGT 	
    940912	    36	 100.0	    30	....................................	AGAGACCCACGAGGTGGAGTTGTGAGCGTT 	
    940978	    36	 100.0	    30	....................................	GAGGAATACGAGCAATCCCAAAATGGTTAC 	
    941044	    36	 100.0	    30	....................................	TAATGTCCTCAATGTAAGGCCACAGTCTGT 	
    941110	    36	 100.0	    30	....................................	TAACCATGAGTCTGAAAGACTATAATGCGA 	
    941176	    36	 100.0	    31	....................................	CAAAGACAAATACGATATACAAGAGCAGAAA	
    941243	    36	 100.0	    30	....................................	AGAGATAAAATAGTATTGAGAGGGTTTAGG 	
    941309	    36	 100.0	    30	....................................	TTGTATCTCCGAAAAGTTCATCTTTAGGCT 	
    941375	    36	 100.0	    30	....................................	TACTCTAGTCGATTTTGGGAGAGGTCTAAA 	
    941441	    36	 100.0	    30	....................................	ATTATCCCAATGGACTAGCTCATTTACTAG 	
    941507	    36	  97.2	     0	...................................A	|                              	
==========	======	======	======	====================================	===============================	==================
        20	    36	  99.9	    30	GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	                               	       

# Left flank :   ATCAGCTTAATGACAAGCCAGAAGTCAAATCCATGATTGAAAAACTGGTAGCTACGATTACAGAATTGTTAGCATTTGAGTGCTTAGAAAATGAACTAGACCTAGAGTACGATGAAATCACCATTCTAGAGTTGATCGATGCCCTAGGAGTCAAAGTTGAAACTCTGAGTGATACACCTTTCGAAAAGATGCTAGAAATTGTCCAAGTTTTTAAATATCTTTCCAAAAAGAAACTCCTTGTCTTCATCAATGCGACCGCCTATCTATCAAAGGATGAGTTAGTAAATCTGATAGAGTATATCCAACTCAATCAACTAAAGGTTTTATTTATCGAACCTCGAAAAGTCTATGATTTTCCTCAATATGTGCTGGATCAAGACTATTTCTTGAACCCTGAAAATATGGTATAATAAGGGTAACAATTGGAACCTGACGAGCTGAAGTCTGGCTGGGACGAATGGCGCGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAG
# Right flank :  AAAGCTACTCATTCTTTGAGTAGCTTTTTAACTATTCCCCCTACACATAACTCATTCCTTTGTAGAAAAGGAAAACGGCTAATGCGACAAAAAGTACGGTTGCTCCAATTCGCTGGCTGGTACTATACATCCGTCTTTCTCCTCTAACTGGAAAAATGACTGCTAGAAAGGAACCGCCTACTGCACCTCCGATATGCCCAGCTAGGCTGATTCCTGGAATCAGAACACTTCCAATGATATTGATCACGAAAAGTGTCAGATAGGATTGCCCCAACTGCTGAATATAGGGGTTGCGAGTTGCGTAACGCAGGACGATAATCGCAGCAAATAGTCCATAGAGGGAGGTGGAGGCCCCTGCTGCTACAACTTTCGGTGTGAAAGCAAAAACAAAGAGATTCCCCATCATTCCAGATAAGAGATAGAGAAAGAAGAACTGCTTAGAACCGAAAATCTCCTCCACCTGTCGTCCAAGAAAGTAGAGCGAAATCATATTGACAATA

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.70,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [56.7-65.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//