Array 1 293971-290257 **** Predicted by CRISPRDetect 2.4 *** >NZ_PIRG01000002.1 Campylobacter concisus strain P7UCO-S2 NODE_2_length_302576_cov_140.763, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 293970 30 100.0 35 .............................. AGTGCGACAAAAGTAACAACATAGCTATCGTCCCA 293905 30 100.0 36 .............................. TACAATAGGCGCTAGCGGTAGAGGTGTATTTACGGG 293839 30 100.0 36 .............................. AATTTAGAGTAATTGCCATTTAAAGCACCCCTAAAA 293773 30 100.0 37 .............................. GAAGTCTCCAAGATGGGTCAAGATGATACTCAGCATA 293706 30 100.0 35 .............................. CATTTTAGGAAAGGTTAGAAAAATGACACTTGGTG 293641 30 100.0 37 .............................. TTTTTTGGAAAATGGGGGCTAAGTTGGCTATTTCCTA 293574 30 100.0 35 .............................. CGGTGGCGTCCGAAACAGCGGCCATTACCGCATTA 293509 30 100.0 37 .............................. TCTCTGCCTGCTACCATATCAGCAATAGCCCAGTCGC 293442 30 100.0 35 .............................. TATGTTGCCCCTGCTGGCACAACCGCACAGACATA 293377 30 100.0 34 .............................. CTGGTAAAAGTCAAGCAGGTCATAAGGCTACATT 293313 30 100.0 34 .............................. AATACTTTCAAGGTTTCTCTTGCTCTTAGTGGGT 293249 30 100.0 36 .............................. AATTTATATGGTTGTGTATTCGTCCTTGACGAGTGC 293183 30 100.0 34 .............................. CTTCATCTTGATAAATAAAGTAGTATTCGCCTTG 293119 30 100.0 36 .............................. CTTATCGTTTGTCAATAGTTTTGATATGGGATTGAT 293053 30 100.0 37 .............................. GAATAAATAAAATCTACATCTATCATCTTGATAAATC 292986 30 100.0 35 .............................. TTAGAGATGAAGTAACTGGGAAAACAAGAGAAATC 292921 30 100.0 35 .............................. CGGGGAGTTGCAACCAAAGTGGCACGCTAACTCTA 292856 30 100.0 36 .............................. TTGCTCCAGGGCAATGGCGTGGCGATCCAGTTGGCA 292790 30 100.0 34 .............................. ATATCACACAAGCCGAAATAATTCAAGCAAAAGA 292726 30 100.0 35 .............................. CCGAATACGTGCTAATGCCGATGATAATCGCCATA 292661 30 100.0 35 .............................. TCTGCTGTGTCGCACTAAATGCCACATCTGATAGT 292596 30 100.0 36 .............................. TCGATCGCAAATGAGCTAAACACATTAACGCGGTTT 292530 30 100.0 34 .............................. GAAATAGGTAACAGCACGCAAAGCATAGTAATAG 292466 30 100.0 36 .............................. TCTTGCCTATCGTATCGCCTGCACTCTCTGCTGTGA 292400 30 100.0 35 .............................. ACAGGCTCTGCTATCCAAGCAGGAGGGATATGCCC 292335 30 100.0 36 .............................. TTGAAATTTTAATAAATCTTTAAACTTATTTTGATA 292269 30 100.0 36 .............................. CTCCCTCACCCCTGTAATTTCGTTTTTGCGCCGTTA 292203 30 100.0 35 .............................. AGTGGCGCAATGGTTGGGCTAAATGAAGACTTTGC 292138 30 100.0 38 .............................. GGCGAAAGGGGGCTTTTATGACCCAGCTGGCTCGTTTG 292070 30 100.0 39 .............................. CCACATTTTTCTACCTCACTGACGGGGTTATATTTTGGC 292001 30 100.0 35 .............................. GGAGTAGCTCAACAAGATGCGATAAGAAATATCAC 291936 30 100.0 38 .............................. GGGCGTGGCGTATATAGTTTTCACACTCAGCGATTTCG 291868 30 100.0 35 .............................. ATTGCCACTTCAACAAATACACAAAAGTGATCTTT 291803 30 100.0 37 .............................. ATATAACCACCAATAGAACCGTCAGTAGAACCATCAA 291736 30 100.0 34 .............................. CATTAGCCGATAGCGTTTCAAGCTTCATCAGGCA 291672 30 100.0 36 .............................. TCAAACATAAACCCAAAGGCTATCTGTCTTGATATA 291606 30 100.0 36 .............................. TGTGTAGTTTCAGCCATAATAAAAAGCTCCTTCTAA 291540 30 100.0 37 .............................. AGCATTGGGGCTGATACGCCATATCAAGAAACCCTAA 291473 30 100.0 36 .............................. CTAGGTAATGCTAAAGACAATCCTGAGCCAAGTCAA 291407 30 100.0 37 .............................. TAAACCTTGTAAGTGGTGGTAACGGAGACGCTAAAGA 291340 30 100.0 38 .............................. GCTATCTACCTGTGCCTCTTGATGGCTCTTGCAGTGGC 291272 30 100.0 36 .............................. TGATTGTTTTGTTTGAAGTCATAAAACACCTCCTCA 291206 30 96.7 37 ..................A........... TTTCATCTCTTTTATATAGTTTGCTTCGTGGTGGTTC 291139 30 100.0 36 .............................. TCCTTTCTCGTTTGCAGAGCTTTCCAAAAGCTTGGC 291073 30 100.0 36 .............................. AAATACATTCTAAAAGGTGGTCTTGTAAGAAGTTCA 291007 30 100.0 37 .............................. AATATAAAAAGCTATCAGTTGCAACCTCTAGTGAAAT 290940 30 100.0 35 .............................. AGGATTTGATATGTTAAAAAGTATCCTAGTTCTTT 290875 30 96.7 36 ...........A.................. ATGCCATTGCTTCTGCACCACATTGCATAGGACGTC 290809 30 100.0 38 .............................. TCAAGATTATGCGTTACATTGTTTGAGTTCCAATTTTT 290741 30 96.7 34 .....................A........ TGCTGAAAAGTTGGGCTTTGTTTGGGCTGATATT 290677 30 100.0 34 .............................. ACAACGAAGAATACGCCATAAGCAACAAGAACAG 290613 30 100.0 34 .............................. CCTCGCTCATCTCTTGCTCGATAACTTGTATTGT 290549 30 100.0 37 .............................. TCGAGATTAGCAGCTTCACAAAAAGCCACTTTTAGGC 290482 30 100.0 35 .............................. GGATATTAGAGAAGGTGCGATATTTAGGGGCTTTA 290417 30 100.0 37 .............................. ATAAATCTCTAGCAGAGAAAAAGGCGTTAGATGCAAA 290350 30 96.7 34 C............................. CATACGTTCTCACACGGCACGCCGTCGCCATCTC 290286 30 90.0 0 ..................A........G.T | ========== ====== ====== ====== ============================== ======================================= ================== 57 30 99.6 36 ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Left flank : GAGCTAGATCCTCGCATCGGCTTTTTGCACGAGCCAAACTACCGCGCACTAAGCCTACATCTCGATCTTGCGGAGATTTTTAAGCCGATCTTGGGCGACACGCTGATTTTTAACATGCTAAATAAAAAAGAGATCACTGCAAAGGACTTCCAAACGGACGCTGGCAGGATAAAATTTAGCAATGACGCTATGCAAAAGATCGAGCTAAAGATGATCTCGCGCCTTTGCGAGACGCTCACGGTGGGCGGTAGGGAGCTAACGTGGAGGCAGGTGATCCGCCGCGAAGCAAATAAGCTTAAAAAGTGCATCTGCGAGGATGCGCCTTATGAGGGCTTTAGGTGGGAGTGAAATCGCATTTTAATAAAGTGTTTTTTAAGATTTTAGAATGCTTGAAATTTAGGGCTTGGCGTATTTACACATGGCTAAATTTTAGTCAAATTTAAGGCGAAAAATATAGACTTCTTGCACTAGAACGCCTATAAAATAGGCTTTTTGGTGCT # Right flank : AATTTTAAAAAGACAACTTTACACATTAGAGTAAAAATAGTTGCTACATTATTATTTTTACAAAAATTACTTACTATGGTCTTTGTTTAAAATAACCACAAAATAAAGAATTTATTTTTGATCCGTACAAAGAACAATTAGCAGGCATGCACCATAATGAAGATAGTGCAATGATATTTAGTGCCTTAGAACATGAGTATCAAAAAGGGCTAAAAGAAACTCCTAATGACACGGATACCCCAGAAATGGCTTCATCTAAATCAAATTTAGATACTCCAGACTGTCAAAATGCTTTTATAAGGAAGTTAGAAAAAGATACGTTTTTCATGGTTGACGACAACCGCATTCACTCTTTTAATAGTCGTTTTTTTGGGGCAGTTCCATACAAATTTTTAGTTGGTAAAGTTAGATGGCAGCTATTTTGACACAATTTAGAAAAACGCCTTGACCAAAGATTAAAATAAAGCAAATTATCGGATCAATGAAATTTTTTATCAATT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.70,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //