Array 1 93394-92152 **** Predicted by CRISPRDetect 2.4 *** >NZ_LUCT01000050.1 Parageobacillus thermoglucosidasius strain GT23 scaffold12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 93393 30 100.0 38 .............................. GAGAAAGTCACGCCGGATGAAAGCAACCGGAGCTTGTA 93325 30 100.0 37 .............................. CATCAATCAAAAGACTGTCATGATGGACTGTAGTCCC 93258 30 100.0 38 .............................. ACATTCGCACGCTTGACTTAACGAAAAAGACAGCAACA 93190 30 100.0 39 .............................. TCGGCAACCCACCCTTCGGTGAAAGCGTAAGCACCGAGC 93121 30 100.0 36 .............................. ATTCATAGAAGAATAAATATTCCGACAAGGGAGGTT 93055 30 100.0 38 .............................. ATCGCTTTCCCACAAAAAGCACATGCGCCTTTTTGTCC 92987 30 100.0 38 .............................. TGAATAAAATTCGTTGTCGTGAATTTTTCGTCACACGT 92919 30 100.0 35 .............................. ATGTGTCGAGCGATTTCTTGATCATTTGTGATAAA 92854 30 100.0 39 .............................. AACCCTGATAACTGGCTGGTCGTGAAGAGTTTGCCGGAC 92785 30 100.0 36 .............................. ACTTTTGAATACGAATATCCTTGCACCCTTCGTTTG 92719 30 100.0 37 .............................. TAAAAATCAAAAACCAATCCTTTTCAGCAGCAATGAG 92652 30 100.0 38 .............................. TGTTGCCATGATAAACGAATCACAGAAGCACGGTCTTT 92584 30 100.0 39 .............................. AGCAAAGAAACGGTCGATATCTTCTTGTGTGGCCATTCG 92515 30 100.0 35 .............................. CTAGTCCGAGATATCCATAATGTAATGACAATCGC 92450 30 100.0 39 .............................. CAGTACAAAGTATACACGGACATTGAACAGGTGACAGCG 92381 30 100.0 36 .............................. ATTTCCGCTCTAATTCGTTTCTTACCTCTCCGGTGC 92315 30 96.7 38 ..................G........... GAAGTAATCTTGAAAACAGCAGCACAGGCTGCCTGGGA 92247 29 90.0 36 ....................A....-...G TATTTCCGGCGTGGAGATGGGATGATATGGGATTCG 92182 30 90.0 0 ....................A....A..G. | A [92170] ========== ====== ====== ====== ============================== ======================================= ================== 19 30 98.8 37 GTTTTTATCTTACCTATAAGGAATTGAAAC # Left flank : TATGTCTTTATAAAAATATGTTAAAAAATCGTTAAAAGGTTACATAATGATGTGATGTAAAAATCATGAGTATTGTAAACACTTCACATATGAATGGTGACAGCAGGAACGGTAAAACAATAAAACAGATAGCAATAAATGAGCCAGAATAATGACTAACGATAACATGCCTAGAAACAGCTTATTGCCAGCACTCAGCCGCTTTTTATGAGGATATAGAGGGAACACAGGAGGTGTCTGCAGCCGGTCTTTTCTTTTCTAATGAATACTCAGTGGTTAAAAATTTTGAATCAACAATAGATGTTTGAATTCATTATAGCAACATATATTTTTGTCGTCGATCCTTAATAGCGCACAAACTCCAGGGGATCGACGACATGTTTATTTTCCTATTTTCTCCTACAGACATCAGCATTTTTTTATATTGACGCAATTTTCAAAACGGCGTATACTATACATATCCATTATCCACCATCCTTGATATATTAGCATTTATTGGG # Right flank : ACTGACAATCTATATCCAAAAGAGCTAACACTGATAATGATCCCCCTTTAAGTGGACAGTGTAAAAAGCCCATTTTTAATCAATGGGTGTTCCACTGTACTTGGAGGGAATTTTCGCATGAAAAGGATAAATATTTCACCGTTATACAGAGGAATTCCAACAAAGAGTGATTTACATGTATGCAGAGGGAGAAAATTGCTATTAAAAATTAGATGGTGAAATGGTAAATTTAATGGATTATAAAAAAGCGCTAGAACGTATTTTAATGGGAAAGCAAAGAAAAATCGATGTCGGAAGAATTGACGAAGAATATAGCATCACTGTAGTGGGGATTGGTTTGGATGGCAAAGTGGCTGAAGTAAATAATGTTTCCAAATACAAAAAATGGTTTAATTTTATTAGATTGGGTGCTCTTTCCTATGTACTTAGTTTCTTGCAAGTTTTATTAAAATACCGCCCTGTCAACATTCAATTAAATGTTGATGGGGAGAAGCTAGTTT # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCTTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.30,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 19492-20987 **** Predicted by CRISPRDetect 2.4 *** >NZ_LUCT01000033.1 Parageobacillus thermoglucosidasius strain GT23 scaffold9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 19492 30 100.0 36 .............................. AAAATCAAATTGCAGAAGCTGTGTTAAATCTAAACA 19558 30 100.0 37 .............................. ATTGAATCGAGGGAAGCCATTGAGACTTCCCCGTCAA 19625 30 100.0 35 .............................. TCCCCTTCACGGCGTATAGTTTGCGCAACATCCCG 19690 30 100.0 36 .............................. CGTAAGTATATCGCAGAGTATCGGCGCCTAACAGCA 19756 30 100.0 36 .............................. TTTACCCGCACGCTAACGTAATCCTCGGAAACGCCC 19822 30 100.0 38 .............................. GCGCACACGCAACGCACGGGGTGATCGGGAATGAAGTT 19890 30 100.0 37 .............................. TTCGTTCCAAGTCTTTTTTCCGTAAACGAACCGTGAC 19957 30 100.0 36 .............................. CGGACTATGTGAAGAAGGTAGTTTTTCAAGGACATC 20023 30 100.0 38 .............................. GAAAAATGGTTGGCCGCTTTCAAAGAATAAAAAAACAG 20091 30 100.0 36 .............................. TTGCCCCGTTTGCGGCTGGGAAGAATGGGGACTCAA 20157 30 100.0 35 .............................. TTTTGTTTTCTCCTTCACCTACCCACTTCACACGC 20222 30 100.0 36 .............................. TTTAAGTCTGCAAATTCAGATAAACCAACAGGCTCT 20288 30 100.0 36 .............................. ATGGTTAATTTTAATTTCATATTTATACCTCCAAAT 20354 30 100.0 37 .............................. TTTGAGTAAGTCACTCATTGTAATTACGCCAACATTT 20421 30 100.0 39 .............................. CCTATTGACGGAACATATACAGTTACTACTTTGAAAGGG 20490 30 100.0 37 .............................. CGTCAATAAAAAAGGAGTAAACGGACCGGCATCCGTC 20557 30 100.0 35 .............................. CTGAATTCTTGAGCGACGACATCTTCAAGCACTGT 20622 30 100.0 36 .............................. AAAACAGAAGGTACCACTACATTACTTGCACCATTT 20688 30 100.0 36 .............................. TCGGTGTGTCAGATGTGGGGCGTATAGGGGGATTGA 20754 30 100.0 37 .............................. TCATTGAATCCGCTATACAACATGAATTCCGGTTTTT 20821 30 96.7 36 .......................C...... TAAACTCAGTAATGTCTGGCTGCCAATCTGCAAGCA 20887 29 90.0 41 .....C...............-...A.... CTAAGAGATCGTTCTCTTCTCTTATCTCTTAGGTTTTTATC 20957 30 76.7 0 ......GC...G.T...G.AA......... | C [20968] ========== ====== ====== ====== ============================== ========================================= ================== 23 30 98.4 37 GTTTGTATCTTACCTATAAGGAATTGAAAC # Left flank : AGTAAAAACGGCCTGCCGAGCTTGACAGTGGTTCCGTGGGAATCAAGCTGCCCGTCAATTGCTTCGAATGGAACGCGCAAAAATTGATATCCCGCTTCATCGGCAATTTTATAATCAAATGAACCATGATCATAATCCCAATTTCCGCCAATGGTATAACCAAGCGGCTTTAACAATTGCTCCAATTGAAATAAAGGAAACGTTTTCCCTTCCAACTGTGATGGAATTTCGATCATCGCAAACAACCTCCTTTTTCACCTATGTTTCCCTATTCGCGCTCTTTATATGATTGTTATGGAATATTGCCTGCTACAAAATGCCCCCACACTGTCAATGTCGTCGACCTGGAATAGCGCAGAAAACCCAAGGGATCGACGACATTTCCTTTTGCTGCTTTTCCCAACTTCCATCAGCACCGCCGCATATTGACGAAATTTTCAAAACCAACTATACTAAACATAGCTGCTTTCGAAAAAGCTGATATACCAACGCTTTTTGGG # Right flank : CACTTACTCCGGCTGCCTTCCGATACGCAATTCAGTTTGTATCTTATTATGAGGAGCAAAACAGGTGTGCAGCTGCATTGTTGCTACCTTTGCTGCCACGGTTTATATTGCAAAACTTAAAACCTCGGTGAATCTTGTTTTTTATTGAGCAAGCCATTCTTATTGCATATTACCGTGGGTGTCAGCGAAAATTTGCTACGATAAGCGCGAAACACAGATGCCTGAGACAAAAACACAGCAAAATTACTTTTTTACAAATAAGATAAAAATCCCTTCCCGCAGCGGAAGGGATTTTTTGATAAGCAACCGGTGGCAAGTAATGTCTTCGCATGCAAAAAACGGAGTGCATGATGCACTCCGAAAATCCGTTCTGTTATTTCAAGCGTTTTTCCAGTTCCGCTTTTTTCTCTTCGTATCCTGGTTTGCCAAGGAGGGCAAACATATTGACTTTATACGCTTCTACGCCTGGTTGGTCAAATGGATTTACCCCTAATAAGTAA # Questionable array : NO Score: 9.18 # Score Detail : 1:0, 2:3, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCTTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //