Array 1 13602-13438 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRFE01000052.1 Desulfopila aestuarii DSM 18488, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 13601 32 100.0 34 ................................ AGCGTGTCTATTTTGGCCTGATCTGCTGTGGTAG 13535 32 100.0 34 ................................ GCGGGAGTGTCATTGCCAGCCCTGACGGGTCGTA 13469 32 96.9 0 ...............................A | ========== ====== ====== ====== ================================ ================================== ================== 3 32 99.0 34 GTCGCCCTCCATGCGGGGGCGTGGATTGAAAC # Left flank : TGAAGCGGCATGGGCGGTGGAAACAGGGGCTATTGAGGTGGTGGCCGCAGCTGATGCCTTCTTGGGCTCATCGCTTTCGCCTTGGGCCGCCTGCGCCAGCTTGTCGTGCAAATAACTTTCCTGAGCACACTTGCGGTTATTTCTGTTCCATTCGGCGCATTTCCTGGTATGCCATTTTCTCATGCACTCGTGATCGCCACAGGTTTTCTGTCGATCCCCGATCCGAGGGTCAGGCGTGAACCATTTTCGACAGATTCGACATGGACGCTTTTTACTTTTTCGGCGTGGCATCGTTTCCTCCCGGCGTTGGATATGAAACGATACTAAAAAGAGAAATATAAAATAGGGAGTTAGAAAAAGGTGGGTCCAAAAATCGGTGGCATATCAGATTGCGATACCAGCTTGGTGGGTTCGTTTTCCGTCGGTGGATGGGTTCATTTTAGATCGGTGGTGACAGATTGAAACTGGTGACAGCAGAGATTGAGACGGTAGTGATGGAG # Right flank : GTATCAAACCAGCATATGGAACTTTTTGTATAACTCCAAGCAAAAAGTATTTTCAAAGTTAAAAGGTGGAAATGTGCGCAGAATGATCTATGTGGGTATGTTCTGAACCGCTTTATCCAGGTAGTCGGCCCACCATTGCATTAATTCCCTTCTCTGTTCAATGTATTCGCTTCGATGGTAGGCGGCCCGAACCTTGTTGCGTTCTTCGTGGGCGAGGGCTTTCTCAATGATATCCGAGTCAAACCCAGATTCATTGGCAATGGTGCTGAAGGTGGCTCGGAAGCCGTGGATGGTTGCCCTGGAGTGGTAGCCGAGTCGATACAATGCATAGAGCATGGTGTTTTCAGAAAGTTGGGGGCTGCCCTGTCTGATACCCGGGAAGATGAGTCCGGTTTCGCCGAAGAGTTCCTTAGCCTGCTTGAGGATTGCGATAGCCTGTTGGGAGAGGGGGATGGTTTGCGGAGTGTTCATTTTCATTCTGGCAGCAGGTATTTTCCACA # Questionable array : NO Score: 8.31 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCTCCATGCGGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-11.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 18060-17897 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRFE01000052.1 Desulfopila aestuarii DSM 18488, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 18059 32 100.0 34 ................................ GATTACCAGCAAGTCAAACGGCTCGATTTTCCTT 17993 32 100.0 33 ................................ AAGCCTTGCCCCTGGCCCTGTCGTCAGGTATCT 17928 32 96.9 0 ...............................T | ========== ====== ====== ====== ================================ ================================== ================== 3 32 99.0 34 GTCGCCCTCCATGCGGGGGCGTGGATTGAAAC # Left flank : GCCATCTGGAAATAATAGTAGGAGGGAAATAAATGTTAGTACTGGTAAGCTATGATGTGAAGACTAGCGAACCGGGGGGAAGCAGAAGATTACGGAGGGTTGCCAAGGCATGCAAAGACTACGGTCAGAGAGTGCAGTTTTCTGTGTTTGAGTGCTTGGTGGACCCTGCACAATGGACGCGGTTTCGTCAGCGTTTAATAGAGGAGATAGATATCGAGAAAGATAGTTTGCGATTCTATTTCCTTGGAGCAAGTTGGCACAATAAATTTGAACATATAGGCGCGAAGAAATCCTTTGATCAGGAAGGTCCACTGATCATATAAAAAATGTTTCCGCGAACCTCAGTCAGGCAGAGAATGCTGGGAGGTTCGCAACCGTAGAACTAACCCGGCTGGGGCTATGGATTACATCTTTTGCTATGAGATGCCAGATGGGTGAAATATTGGGTTCGCGGAAGTTGTAAATTTTATTGATTTGTATCGGTCTATTACAAATTGACC # Right flank : GTCACCACCGATAAAAAACAGACCCAGTTGAAGAGTTCAAGAGAACCCACCCACAAGTTGCTTATTTGCGATTGCACTCGGCATTTTCACCGATTATCGGACCCACTGCCGGTAGCATTATCTACCCATAAAACATACGAAGTATGCGAGGACAGTCGTCGGCACCTGGCGGGGAAACCTGTAGCCCGTAGGGCGGAAGGCTTCCCCGCCAGGTGCCGACGGTTGGTGTAGAAGGCAATGGGAGACAGGGGGGATTGTTGGGGTGGTCGTCAGTTCATACTGCCCGAGAAGGACTTTGCAGGATGTATCCTCTTGCTTTTAATCCCTTGTGGTGCGGTTATTCAACTGTTGTGATTGATGGAGACGCCAGGAAGGACCTTCGATGCTTAAAATGATGGCATGGTGCACCATCCGATCAACGATGGCGGTGGTGATGACGGGATCTCCCAGGTAATCGCCCAACTCCTTGAAGTCGATATTTGAGGTGATCATCGTCGATT # Questionable array : NO Score: 8.31 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCTCCATGCGGGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.40,-11.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //