Array 1 301921-301290 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134366.1 Wolinella succinogenes strain NCTC11488 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 301920 36 100.0 30 .................................... TCTTTGTCGTCTGCTCTGAGCATACTGATG 301854 36 100.0 30 .................................... CATCAGCTTCTATTTCCTTGCCCCTGAAAT 301788 36 100.0 31 .................................... TATACTTCCTCCCTCAGGCATGATTGCTTGG 301721 36 100.0 30 .................................... GTGTTAGCGTACTTCTTGTACCATTCTTTT 301655 36 100.0 30 .................................... TATTTCGACTCAGTTGCAGGCTATGTAGCT 301589 36 100.0 30 .................................... TTGTGAGGGTATATGTACCATCCTCAAGCT 301523 36 100.0 30 .................................... TGTTATGGTGCTAGCCGTGTCGATGTATTC 301457 36 100.0 30 .................................... CCTTGTTGCAATGAAAACAAGATCAACCTT 301391 36 100.0 30 .................................... GCTCAATTAGATTGGTAACTTCTTTGGCGA 301325 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 10 36 100.0 30 ATTATAGCGAGGAATGGCTGAGTAGGCGGCTATAAC # Left flank : GATATGAGACGCTTTTGTCGGCGACACAGATTATTGCACGGTCTTTGGTGAGTGCAGGAGAACAGAAGGAGAGCAGGCGGCTGATTTTGCCATGGATGGGTGAAGATGATGTACAAGGTGAAGTTTATGAGGCTGATGGTGATGTTTGACCTGCCGACGGGGACAAAAAAGGAGCGCAAAGCCTACACACTCTTTCGAAAGTTTCTAATCAAGGAGGGCTTTGAGATGATGCAGTTTTCGGTCTATGTGAGGATATGCCGTGGGGCAGATATGGCGCTGGCTTATGAGGATCGCATCCGCCGAAACATCCCACCAAAAGGCCATGTGCGTAGCCTTGTGTTGACAAATAGTCAATATGAACGGATGCATATCCTCCTTGGAGGGCCAAAATCCCAAGAAAAAATCGGGGCAAAACAGCTTGTATTGTTCTGAATTTGAGCAGTTTTTTGTTGAGAGAAAGAGTCAAAAAGCCCTTATTATAGGGCTTTTTGAGGAGAACT # Right flank : GGGTTTATCGTCAAATTTTATCGAATGCGATCAATCTCCTCTTCCAAAGAGGCGATCTCTTTGGCGAGGCGCTCCAGCGTGGCAAATCGCTTTGAGGAATCATGCTCAAAACTTGCGGGTAGGGCGAGCTCTAGGAGATTCTCAGGAGTGATGATGCTTGCTGCGCTTGATTCGTAGAGTCCAGAGACGAGCTTTTGCCCCTCCTTGGAGAAGAGATAGAGGTAGAGTGCGATCGCTTTCTCTTTTTGAGGGAGGCGAATCACGATGATTCCCGCGTTGGCGATGGCGAGCTTGTCGCGGTAGCCCTCACCCAAGAGGGTCACTTTGGGCGAGCTTCCCCGAAGAGGCAGGAGGATATCATAGGGTTTGAGTGCATAACGGAGGATTTTTTCTCTATCGCCGCTGCTTCGCAAGGTACCCCGATGGTCGGTGAAGCAGTAGGGGGCGAAGTCTTGGATTCCGATATCAAGGTATTCAAGTGGCACATCCTTGCTGCCGCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATAGCGAGGAATGGCTGAGTAGGCGGCTATAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 448516-446946 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134366.1 Wolinella succinogenes strain NCTC11488 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 448515 37 100.0 34 ..................................... TCGAATTGAGCACCCGAAATTTCACTCGGTCAAA 448444 37 100.0 35 ..................................... AAGAAGGAAACAACCCTGTTGGGAGCAGTTCCCAA 448372 37 100.0 36 ..................................... GGGGAAAGATGGCAAAATCAAGCATCCATATTGAGG 448299 37 100.0 36 ..................................... AAACTGATATTTGTTTTGACTACAAAGAGATAAAAA 448226 37 100.0 35 ..................................... CCTGCGGTAGTGGTTCGATACAATGTTTCAAGCGG 448154 37 100.0 36 ..................................... GCTCATCAGCGGGTAGATCTCTAAAATGCCCTTTTG 448081 37 100.0 38 ..................................... CCTCACATTGTAGTTCGATAGATTCGCTCTTGCGGAGT 448006 37 100.0 35 ..................................... TACAGCCCGTGCCTCGTAGGCTCTATGAGTATCAG 447934 37 100.0 35 ..................................... GGTGCTAGCGCAGACTGAAAAGCTTCGGTGAGCTC 447862 37 100.0 35 ..................................... AAACTCTTCTGCGTCGATGCTCAGATTGATGTTGT 447790 37 100.0 36 ..................................... CTACCACAACAAAAACAGTTAAGGGGCAAGAAAGAA 447717 37 100.0 36 ..................................... GAAACTAATATGAGTATGAGGAACGCCACTCTTATG 447644 37 100.0 35 ..................................... CGTGGGCGGGGTGAAGAAGGAAAACAATAAATCTA 447572 37 100.0 37 ..................................... TATCAAGACTTGGGTTTAATGCAGATATTTACACAGA 447498 37 100.0 34 ..................................... AATACAGGGTGGCACTCATGCTACTCTGCGAAAC 447427 37 100.0 39 ..................................... TTGAAGAGTCGCTTATATACTAAAAAAGTTTGGGTTGAT 447351 37 100.0 38 ..................................... TGAAAGTAGAACCCGCCTCATTTGTAGAATTTGAAGAG 447276 37 100.0 37 ..................................... TCTTGCGTGCTCATGAAATCGTCACCGTGATTGTCGA 447202 37 100.0 36 ..................................... TTTCAGGCGCGGCGAGTATTCCGTTTTCTAGGTTTA 447129 37 100.0 36 ..................................... GAAGCAACTATTACAGGGCTTAATTGAGCTTACCGA 447056 37 100.0 37 ..................................... ATAGCGTATTGATAGATGTGGTTTGCCCTGTATGCGG 446982 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 22 37 100.0 36 GTTTCACAGGCTAAGCGGATTTGCTATAAAGTGTTGC # Left flank : ATTTCTGAAGTTGTGTGGGTCGGTCAAGTAGACTTCACCAAGATCGTTCACCCAAGTCACCTCCCACCAATCCCTGCCTGTGGTGAAGGCTCCTGTGTTGTAATCAACCTCTTGAGCATTGGAGCTTTTAGCGCCATTTGGGATAGAGGTCCAGTCGAGCTGCTTGGTGTAGGAGGCGATGTCACTATATTTGTGGATGATTTTGACACTGAGAAGCTTGTGTCCGCTTTGATTGACGATTTCTACGGAAGCTTTTTGATGCGTTGCCATGGAATTTCTCCTTTTTGTAGAGAGGCTTTTACCTCCATTGGTCGTAACACTATCTGAAGAACTTGGTGGGAATTCATCATATCTAAAAAATATAATTTTTGAAATATTTTAACCGCTCGCCTAAGAATCGACCGCTGGTTGAGATTCAAAGAATGCTTTGTTAAAGCTGGATGGGATTATTATAGAGTGTTGCGGAATCGCTTTTTGACAGTCTGTCGGGAGATTTCAAA # Right flank : CCCCCTCTGAAGATGTCCATTTTTTGGGTATTTGCAGAGGATGAGAATCGTAAAATTTTCTAAAATTGATACCTTGTGCCAAAACAAGGTTTTTTTTAGAAAAATTTGTTAGAATGTTCCCGCAACACTTTATAGCAAATCCGTTCGATGCCTTGAAATCATCAAAAAGATATAATAGACCCGCCCACTGTATTGTACATGGCGGGACTTTTTAAAACCTGTCATTGCAGTAGTTCAAGAACTCACACTGCGTGCATTTACTTCCGTCGGCACTGGAGTGAGGTAGATTGCCTAACTCTATCATTTCTATTATCTTCTTTACGAAATTATTTATCTCCGCCTTGTCTCCATCTGATATTTTTATTGGTATGGTTTTGCTATTTTTTTCAAATAGCACAAACCCCATCTCAAGCTTTTTTCTATAGATTGCCTCCGCAAGAACACCATAAGCTACAATTTGTGCCTTTTGTGCCTTTGTTATCTTCTCGCCGTGTAACTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCACAGGCTAAGCGGATTTGCTATAAAGTGTTGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.60,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //