Array 1 972049-973866 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019979.1 Streptococcus agalactiae strain Sag158 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 972049 36 100.0 30 .................................... CCGTTCAATCTGTTCTTGCTTTTGGTCATC 972115 36 100.0 30 .................................... AAGGGTGTTAGATGATAATACCTTTTTTAA 972181 36 100.0 30 .................................... ACACCGTTGCGGTTGTTGTCGGTCACTCAA 972247 36 100.0 30 .................................... TCTATTAACAATAGTTTTATCCAATTGTTT 972313 36 100.0 30 .................................... TGAAAACAAGCGCAAAGCTGTCAGAAAACA 972379 36 100.0 30 .................................... AGTTATCAATGCTATATGGTTTCTCATCTT 972445 36 100.0 30 .................................... GTTTAATTTTGAATAATATCATGTTTACTC 972511 36 100.0 30 .................................... TATGTCATTGTGATTGTGGGAATACTTGTG 972577 36 100.0 30 .................................... GGCGAACTTGTAACGTTTGACGGTAATTTT 972643 36 100.0 30 .................................... TAATGTCTTTTCCTAGAATGTACATTTCTA 972709 36 100.0 30 .................................... GGCGAACTTGTAACGTTTGACGGTAATTTT 972775 36 100.0 30 .................................... TATTTCATCATAGAAAATCCTGCTAGTGGT 972841 36 100.0 30 .................................... GCGATGATGGTAAGTCATCATGGACAGCGT 972907 36 100.0 30 .................................... TTTTACACACGATGTCAGATATAATGTCAA 972973 36 100.0 30 .................................... AGTACTGCACTAGGAATTGTAGAGATCAAA 973039 36 100.0 30 .................................... CGTACCATCTATCAATTTACCGCAAGCTGT 973105 36 100.0 30 .................................... CGTACCATCTATCAATTTACCGCAAGCTGT 973171 36 100.0 30 .................................... CCGATTATTTCCTACATAATACGCACGTTT 973237 36 100.0 30 .................................... AACTGTGTGATACTTTTCGTTTTTTTCTTT 973303 36 100.0 30 .................................... TTTTATAAGTGATAGAGTGTGCAACACCGT 973369 36 100.0 30 .................................... TTAAAAGATTTAAACTATCAAGCGTCAATT 973435 36 100.0 30 .................................... TTCTAAATGCTGGTGACTGCTTTGCATAAA 973501 36 100.0 31 .................................... TTGCTGCTAGACCCAAACAGTTTATTTTTAG 973568 36 100.0 30 .................................... TCCTTTTTTAGATAATGTGCGATCACGGAC 973634 36 100.0 29 .................................... TTTTACCAATGCTTCCATATCGCTTATAT 973699 36 100.0 30 .................................... TACTTGACGAATTGAAGATGACGGAATTTA 973765 36 100.0 30 .................................... TGGTTATACATTTACTAATCCATCAGCATT 973831 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 28 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTAAGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //