Array 1 14931-14411 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLJM01000119.1 Escherichia albertii strain HIPH16576 entry119, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 14930 29 100.0 32 ............................. GAATCGCCCACCTGCCATTACTCCATACACGG 14869 29 100.0 32 ............................. CGATGAGGATAGAAATAATTTTGTACCAGCAG 14808 29 100.0 32 ............................. GAGTGACCACGGTGGCAAAAATATCAGGAACT 14747 29 100.0 32 ............................. TTTAATGTTCGGGATTTCGTAAACCCGGCATG 14686 29 100.0 33 ............................. TCGGCGGTGTTCCCCCCTCCCAAACCATTAAGC 14624 29 96.6 32 ............C................ GCAATACTGGCCTGACCACCGTTCACCATTGG 14563 29 93.1 32 ...........AC................ CCCGACAGGGCATAGAAGGGGCGAAAGAAAAT 14502 29 96.6 32 ............C................ GGAGAAAAATCACGGCACAGAAGAAGAGTTAC 14441 29 79.3 0 ............C..A........TCTG. | A,C [14413,14422] ========== ====== ====== ====== ============================= ================================= ================== 9 29 96.2 32 GTGTTCCCCGCGTCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCAGGTGAAATTGAACCGCCACAACCCGCGCCGGATATGTTACCCCCTGCAATTCCTGAACCTGAAACATTAGGCGATAGCGGTCACCGGGGGCGCGGTGGATGAGTATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTTCGCGCAGGTGTATATGTCGGAGATACGTCAAAACGTATTCGGGAGATGATCTGGCAGCAAATCACTCAACTGGCTGGTTGTGGAAATGTGGTAATGGCCTGGGCGACCAATACCGAGTCGGGGTTTGAATTTCAGACCTGGGGTGAAAATAGACGTATTCCGGTAGATTTGGATGGGTTACGGTTGGTTTCGTTTCTTCCTGTTGAGAATCAATGAGTTACCCGTTATTTAAAAATAAGGAAATGTTTGAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGATATGTATGCTTAGT # Right flank : CTTCTATTTTCAAACTCATCAAGACGCCTTCGCCAGTTCCTTCACCAGTGGCAGCATTATCCGCATAATGTCACGGCAGCGACGTTCTATTCTTCCTGGAAGCGCCTTATCAATATGTTGTTGATTATCCAGCCTTACATCATGCCAGCTATTTCCCTTCGGGAACGCTGCTGTTTTTGCGCGTTGTTGATAGCCGTCTTTATTTCCAAGACTCCAGTTTGTTGCTTCAACGGAAAGTACAGCAATACCCGCTTTGTCGAAAACTTCTGCATCATTACAACATCCCGTGCCTTTCGGATAATTTTTATTCAGACCTGGATTTGTGGCGGCGGCAATTCCATGGCTGCGTGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCCGGGGTGTTTACGCCGCTATTGAAATACAGCTTATCGCCTACAATCAGGTTATCGAGATTAATAACCAGTAGAGTATTTTTCTTTTCGGCTTCACTCATTCGCTTGA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTCAGCGGGGATAAACCG # Alternate repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 9082-8871 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLJM01000023.1 Escherichia albertii strain HIPH16576 entry23, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 9081 29 100.0 32 ............................. TTTGAATCTATTCTTGAAGGCGGAAACATTAA 9020 29 100.0 32 ............................. CTGAAACTGGCTGACCTTGCGCCTGTCATCCT 8959 29 100.0 31 ............................. GACTCGCAATCGCCAGAAGACGCGATCAGTT 8899 28 89.7 0 ......C..................-..A | A [8897] ========== ====== ====== ====== ============================= ================================ ================== 4 29 97.4 32 GGGTTCTCCGCGTCAGCGGGGATAAACCG # Left flank : CTGGATGAGCTATTAGCAACGCTGACCGATGATAAACCACGAGTCATTGCACTGCAGCCAATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAACTGGCGTTTGTCGATGCAAACACATAAATATTTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAAACTTCCACTCATTTATATTCTTTGTCGCCTCTGAAACTCCTCCATTTTGCCTATCCGGGACTAATCATTGCCATTCTCTACAAATTCTGTGGCGTTAATTCTTTGTTGGAATGAAAATTATTGCGGTAGAGTTTGGTAGATTTTAGTTTGTATAGAATCACTTTAAATATTTAACTTTTCACTCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTTTTTGTGTGATCCTGTAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGTTTATGTTTAGA # Right flank : TTTAGGTATGTTCAGGCCGGGCAGTTTCCCGCCCGGTTTTCATCATTTAGGCATTCGACCAGCTCTGGATTGAATCTGCATTCCCTAACTCACCATGCATCACTTCATACGATTTTTTCAGAATCACATCGGTGTGTTTGGTTAGGTCTTTGAAAATGCCTTTATTCATTGCGTCGTAGCGTTTGGCATTGCTCTCAACAGGCATAAAGACATCTTTCACGCGAACCATTTTGTCGACAGCCGTTGCGTAATCTGGATATAACCCCAGCCCTACCGCCGTATTGATCGCCGCTCCCAGGCTTGCACAGCCGTTAATGGCATTACGTCGTGCAGGAAGGTTGAATACATCGGCAAAAATCTGCATAAACAGATCGCTGTTCGAACCGCCGCCAGTAATGATTACATGCTTCGCAAAGTGATTCATTTCATTACACATATTGTCGTAATTATTCTTCAGCGTCAGCGCCACGCTTTCCAGAATCGAACGATAAATCCAAGCG # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGTTCTCCGCGTCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTCAGCGGGGATAAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.40,-10.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //