Array 1 963143-966621 **** Predicted by CRISPRDetect 2.4 *** >NZ_CADCWQ010000001.1 Virgibacillus doumboii strain Marseille-Q1616, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 963143 29 100.0 36 ............................. AAAGAAAGGCGACGGAACACAAATGGACTGTTGTAA 963208 29 100.0 36 ............................. ACACAAACCGAAGAATTAATTGAAATAATCAAATCC 963273 29 100.0 35 ............................. ATTAAATAATTACTTTATAATAGGGGCGTGTTATA 963337 28 96.6 36 ....................-........ AAAACAGTAGATATTATTAAAGAGTACATTGATAAT 963401 29 100.0 35 ............................. AGACCTTTCATGGAGCGAATTAAGTTGTCTTTTTC 963465 29 100.0 38 ............................. TTTATTAATATTGTAGGACGTACTGCGTGCCAGTTAAC 963532 29 100.0 36 ............................. ACGCAACCCGATATGCTTTTTCCGTTTCTGCTTTTT 963597 29 100.0 36 ............................. CTGATTTAAAAGCGATTGTGCGCTTTCTTTTAGACT 963662 29 100.0 35 ............................. AATAAAGTATCTAAAATAAATGGGAATTGTTACAA 963726 29 100.0 37 ............................. GGAGCAATAATTTGAGAGTTTGACAATACATTACTCA 963792 29 100.0 36 ............................. ACATCATCATTCCATCTCCTTTACTGTTCAAAACCA 963857 29 100.0 36 ............................. AAACTACCAAAGGGAATATTAAAACGTGGTGATCGT 963922 29 100.0 37 ............................. TATACTCGAAGAAATTCGCAACGATCAAGGCGAATTA 963988 29 100.0 38 ............................. CTAGTTTTTCGTATATGCTCATTTCCATCCTCCTTAAA 964055 29 100.0 39 ............................. TAACAAATACGTTGAACCGATTACTGAAATCGAATACCA 964123 29 100.0 36 ............................. ACGCATTGAACGCCTCTTTGAACAGTCGGTCTGTTC 964188 29 100.0 38 ............................. CTAGATGATTTTACATTAATAGTAGAAACATCTGTAAA 964255 29 100.0 35 ............................. ACGGATATGAGCGCTCAAGTTCCGACGGCGCAGAC 964319 29 100.0 35 ............................. TTGCTAGGTTAGGGGGCTGCTCCTCAACAACCCCA 964383 29 100.0 36 ............................. CTAGCAGACGTGGACAATTCTTTGCAAGGGCGACCA 964448 29 100.0 38 ............................. ATAGTTTTCGTACTCTCATTTGACTTTTCGCTTGGTTT 964515 29 100.0 36 ............................. TCTGCAACAATTCTTGCACGTCTGGGGTTTGTCCGG 964580 29 100.0 35 ............................. CAATAAATTCCGGCGGGTAAATCAAACATCGTTTC 964644 29 100.0 37 ............................. AAAGCAAAGTGAGATTTCATGGTGGAGGTACTTGAAC 964710 29 100.0 36 ............................. TTTTCCCGAATATGCCAGTACAATGATATTAGCAAC 964775 29 100.0 37 ............................. AAGTCCATTTTGTGTATATCGCTCAATGCGCCCTCTT 964841 29 100.0 37 ............................. AACCCACCAGTAAAAGCATATAATTTTTCGTTTACTT 964907 29 100.0 37 ............................. CTGGCAGATGTGGACAATTCTTTGGTAGGTCGCCCAG 964973 29 100.0 36 ............................. ACAATAATTTCAGCAGACAAACCGTTGTTATAATAC 965038 29 100.0 36 ............................. ACGCATTGAACGCCTCTTTGAACAGTCGGTCTGTTC 965103 29 100.0 37 ............................. TTGACTGTTGTATTGGTGCTTTAGCTTTGCTGATCGA 965169 29 100.0 35 ............................. TTGTAAAATACGGGGATTACCACGATTGCGATAAC 965233 29 100.0 37 ............................. GGAACATTCAACAAAGAGAAATACATGATTTAACCGA 965299 29 100.0 36 ............................. ACTAATCCGCAATGTCACATATTCGTCGTCCTCGAC 965364 29 100.0 36 ............................. ATGAAAAGAGCGATAAATGCTAGGTTGAAAGATTAT 965429 29 100.0 36 ............................. ATATTATCCATGGGGTGTGTGGGTAACGGCATATGC 965494 29 100.0 36 ............................. CTCCATGCTTTCGCTGTGATTCCCTCGAATGTACAT 965559 29 100.0 37 ............................. CCGGTAGTGAAATACGAGCAACTGAATGTGACTTTTC 965625 29 100.0 36 ............................. TTGGAAACCAAAACAAGCTACAACGAAAACATTCCG 965690 29 100.0 36 ............................. ACGCATTGAACGCCTCTTTGAACAGTCGGTCTGTTC 965755 29 100.0 35 ............................. ATTGTTGGATTAGGTGCTCTAGCGGTTGAATCAAC 965819 29 100.0 35 ............................. TATGAAATAGCTTCATGTATTGGTAGATTGTTTGA 965883 29 100.0 36 ............................. ATAATCGGTGATAATGTTGGCAGCATGGAGAACAGA 965948 29 100.0 35 ............................. GGCGACACATTAACCAAAATTGCAGAAATGTACGG 966012 29 100.0 36 ............................. TATTGAACGCTGACCCCTCGTCCTTTGGATGCATAG 966077 29 100.0 36 ............................. ACATGAATTCGCCTGCTTTACCTGCACCCTGAAGTG 966142 29 100.0 37 ............................. TCTCCTCACTCATTCGTGACCCCCTAACATTACGACA 966208 29 100.0 37 ............................. GTCACTGTTTTAAGAATTCTTAAAAACCCCGCTTTGT 966274 29 100.0 36 ............................. TTAGTCTCCAACATTCTAAAGGTGTTAGTTTTCTGA 966339 29 100.0 36 ............................. CAGATTAATCGTCCAAAGCGGTATGGATGAAAACGT 966404 29 96.6 36 ............................A CGCGCTTATTTGAGAATATGTCGTATACTACTTGCA 966469 29 86.2 31 T..T.........G...A........... CTATACCAAATTCTGAGAAGGTGTTAAAACG 966529 29 89.7 37 A................A.......G... TTTATAATTTTAACCCACAGAATCAAGTGAGATATTT 966595 27 86.2 0 ................--.A....C.... | ========== ====== ====== ====== ============================= ======================================= ================== 54 29 99.2 36 GTTATATCTGAACATAGTGGGATATAAAG # Left flank : TGATAAAGCATTTTATTGGTGATCAAAACTATAAACCTTTAAAAGCGTGGTGGTAATGATGTACGTTATCATAACATATGATGTTGGGGTCAAGCGTGTCGGGAAAGTGTGCAAAAAGTTAAAAGAGTATCTTACCTGGTCGCAAAATTCCGTGTTTGAAGGAGAAATTACGAAAACATTATTACTTCAATGTATGAACGAACTTGAATCAATAATCAATCCAAATGTAGATTCTATATATCTATATGAAGTACGAAATCCGAACCATATTAAAAAGACAGCATACGGTGTGGAAAAGTCATTTGACGACATGTTTTTATAAGCTGTACTTGCAGTAAACCTTCAATTTATAGAAATAATGTAAAAACATTGATATACTGGGATTGAGGATTTGTTTTCTCAGTATTTTGTATTTAAGACTAGTGGTTTACTGCAAAAGTGACTTAATCTTAGTTCCATGAATGTTGATTTCATGGGGTTTTTTAGGTGAATTTTGTAGG # Right flank : GGCGCTTGATTTGCTTTTGTGTTAACACTGTAAACTTTCACTTTGTTTCAGGTTGTGATTTTCAAATTACTTCATATGCATAAACTGCATAAAATGCGCTGCACGGCTTGATATGGAGAAGTGGGCATGCTAGCCTATTCGGCAAGCCAAGTCTTTAGACTACTGGCCCTAGGCTAGAAATGCATGCCCACAGAGGCTCCATGTCAAGCCACTCCGGTATAAATATACATTTAATGCGGGTTATATTCATTTAAACTTTGTGAAAAAACTTGCTTAATTTGAACAAAAACCACTGATTTTGGCTGGAATAATGTGTATCTTTACATTAACATGTTTGAATTGTTTGTATACAAATAATAATACCAATGTGTTAATAGTAGCCAGTAGGGTTCACGTTGTACGGCATTAAATTTTATAGAAACCATGGTTATAAATAAGCCCACACCCTTCACAAATCCATCGCCCACATCATATACTAAATAGGCAATACTTTAAATTTT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATATCTGAACATAGTGGGATATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [7-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //