Array 1 38946-37045 **** Predicted by CRISPRDetect 2.4 *** >NZ_UZWE01000015.1 Paracoccus haematequi isolate aCIP1116241, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 38945 32 100.0 35 ................................ TGGCGCGTGGATATGACGGTCGTCGCCTACACGAT 38878 32 100.0 35 ................................ GCCCCGCTTGACCGCATGATGCAGGATGCCTTTGC 38811 32 100.0 34 ................................ GTTAACAGTCGATAGCGAAACACCTGCCTCGGCA 38745 32 100.0 35 ................................ AGCGGCTTGGCACCAAATAGCACGGGTGGCCGAGT 38678 32 100.0 34 ................................ CTCAACCGTCTGGCCGCCGATGGTGACACGGGTG 38612 32 100.0 35 ................................ GCCGAAGATCACGGCATTGCCGCGCAACTCCACAG 38545 32 100.0 36 ................................ TCCTTTGAAATCGGGCATACCTACAAGCACGAAGGC 38477 32 100.0 34 ................................ AGCAACTGCCAGACGATTTGTCGCGATCCCGCCA 38411 32 100.0 35 ................................ TGCACGATTGAGCTGAAGGTGCGGACAGCAAAGCG 38344 32 100.0 35 ................................ CGTCCACGCCACCAGCAAATGCGTGAAGCCTAGCA 38277 32 100.0 35 ................................ ACGGACATACTCGACCGAGTTGGACGCGGTTTCGC 38210 32 100.0 34 ................................ TCGAAATACAAGCCCATCCAGCTTTGGAAGGCGG 38144 32 100.0 36 ................................ AGCGCCAGCGTGACAGCCGCAAGCAGGAACGCCGCC 38076 32 100.0 35 ................................ CGCGACATCCACGGGCGGCGAGTGCGCCACCTGTT 38009 32 100.0 34 ................................ CGCCAAAACCGGCGCGGACCTGGAAGGACTGCTT 37943 32 100.0 34 ................................ TGTTCTCGTTCTAATCCGCGAACGGCGCGGCGGC 37877 32 100.0 34 ................................ CAGGCAGTCGCGCCAGCAAATGGAAGAAGAAGCT 37811 32 100.0 34 ................................ TTCCACGGCGGCGGGGCGAACGGCAAATCGGTCC 37745 32 100.0 35 ................................ AACTGGAACCGCCCGACTGAAGAAACGCAAGGGCT 37678 32 100.0 35 ................................ CTGACCGAGGACGTGATCGGGGCTGACGGAAAGCC 37611 32 100.0 38 ................................ GGCTGTCGGGGCCATCCGCGCGACCTCTGAAATCGACA 37541 32 100.0 34 ................................ CTCCCATCCGTTATAGGCCCAATAGGTGCTGTTG 37475 32 100.0 35 ................................ CAGCCGTTGGTCAGGTGCCATCGCCGGATCTCGGC 37408 32 100.0 34 ................................ CGCGCCCGCACGACGCCGTTCCCGCCCGGAAGAA 37342 32 100.0 33 ................................ TCCGGGTCTTTGACGAAGGGGCAACCGCAGCCC 37277 32 100.0 34 ................................ GCCCTGGCACTGTCGGACCAGATCAGCCGGTTCA 37211 32 100.0 37 ................................ GCCGGGCTTGCGGGTCGGAATGCCGCGATGGCCGCGC 37142 32 100.0 34 ................................ GGCGTGAAAACGGGCACGAGCGTGCCGGATGCGC 37076 32 96.9 0 ..........................T..... | ========== ====== ====== ====== ================================ ====================================== ================== 29 32 99.9 35 GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC # Left flank : CGGCTCAATCTTCGCCCATTGGGCATCCGTCAGAACATTGCGATCCATCCTGACTATGAATCACATCAGCCTCCGAGTGTGAATCCCCACAGACCCTAGTTTCTTGTCCCTGCGAACATGAAGCGTGCCGACTTTTACGTTGAGGTTCGCATCGGGGCGGCTTTTTGAAATCGTTGTATTTTCTTTCCCTGTCCGCCATATCGGCAGACTTGGGACGAGCGCAACTGACCGTTTCGCATTCGCATGGAAGATTGCGGCGTAACAACAGTGCGGTATAGGAGGCC # Right flank : TCCATCGAATCCGAGACATAGATCCGCGCCAAGGCTTCGGCCGTTCGCGAGGTAGGGTCTCGACCAAGATCCATCTGCGGGTCAATGCGGCACGGCTGCCCATGAGAACCGAAATCATGGCTGGGCAGACATCGGACTACCTCGGCTTCGATCTGCTCATGGCCGACACCCTGCCCGAGCCTGGCGTTCTGCTCGCAGATCGCGGCTACGCTTCTGACAACATCCGCAAGACCATGGCGGTGCGCGACGTGGTGCCGGTCATCCCCATGCGCAAAACCCGGAAGCTCCGGGTCGCCGTCGACCGCAGGCTTTATCGGCTGCGCAATCTCGCCGAGCGGTGCTTCTACAAGCTCAAGAAGGCCCGGCGCGCGGCTGCCTGCTACGACAAGACAGCCGAAAGCTTCCTGGGCTTCATCGACATCACGTGACCCGCCTCTGGCTCTGTCATTTGGCAACACGACTCGTCGACTGTTATCAAATTCGCCGGCTGTTCGCGGTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCCTTCGCGGGGGCGTGGATCGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-7.20,-7.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //