Array 1 37-856 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAGZ01000032.1 Austwickia chelonae NBRC 105200, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 37 28 100.0 33 ............................ CTCCTCCGCAAAAGCGACCCCGAGGTGACCAGC 98 28 100.0 33 ............................ CCGCCATCAGCGCGCCACCGGCCAGCAGCGCAA 159 28 100.0 33 ............................ TGAGCCGTTCGCATCATATGCTGAGATGCCGAG 220 28 100.0 33 ............................ TCGCGCGGCGACGTCCCACGGGTCCTGCCCAGG 281 28 100.0 32 ............................ TCCTCACGCAGACCCCGCGCGTACCACAGTGC 341 28 100.0 33 ............................ CTGGTTGAAGGCCAACCCGGCCTGCCCGATCCG 402 28 100.0 33 ............................ CGAAGACTACCCGCCTCAGCTGGTGGACGGTCG 463 28 100.0 33 ............................ GACCATGAAGCCGGTCAAGCTCGCCGGTATCCT 524 28 100.0 33 ............................ CAATCCGGCGTACTCGCCGTCAGTGGAGATCAG 585 28 100.0 33 ............................ CACCATCCGTGTCCCGTCGGTCATGACCGCCTC 646 28 100.0 33 ............................ CCAGCTCATCGACGCGGGCGTGCCCGTGTGGGA 707 28 100.0 33 ............................ GGTCAAGTTGCTGCCGTTCGAGGGTGTCATTTG 768 28 100.0 33 ............................ CGGGACTTCCCATCGTCATCGTCGAGGCCGGCG 829 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 14 28 100.0 33 ATGCGCCCCGCACCTGCGGGGATGAGCC # Left flank : GCCCCCACTAGCCCAGGAGCCTCGAGATGCACGCCGA # Right flank : CACTGGCACGCTGACGATCTCGAACCTCGTGGTATGCGCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGCGCCCCGCACCTGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [16.7-25.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA // Array 1 129284-130290 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAGZ01000017.1 Austwickia chelonae NBRC 105200, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 129284 28 100.0 33 ............................ ATCGGGCCCCGGTGGAGTCCGACCGTGGCTCGA 129345 28 100.0 33 ............................ TCCAGGGCAGCAGTCGCGGCGGCCGCGTCATCG 129406 28 100.0 33 ............................ CCCTGGTACGCCCTGCTCATCCCGAATCCCCGA 129467 28 100.0 33 ............................ GTCTTCGGCGACGACTTCAGGCGGTACGGCGCC 129528 28 100.0 33 ............................ GGGCGACCCGGGCAGCGGCGGCGGCGGGTCTAC 129589 28 100.0 33 ............................ CCTGAAGCGCGCCTCCTGGATTGAGTGGTCGGC 129650 28 100.0 33 ............................ TTGGCCCCGTCATCCAAAGCGATGCTCGACCTG 129711 28 100.0 33 ............................ CCCGACGACGCTCCCTAACGGCGGTCACGGGTT 129772 28 100.0 33 ............................ AGATCAAGATAATTCGCGCTCGCTTCGCTTGTC 129833 28 100.0 33 ............................ CCCCCAAGCCGGTGCCGGTCACCTGACCGCGAG 129894 28 100.0 32 ............................ ACCGAGATCGACGCGGTCCTCGAGGCGCAGGC 129954 28 100.0 33 ............................ TGCCATCGCGACGATGGCACTGACCACGGCCAC 130015 28 100.0 33 ............................ GGTCATCCCGATCGATAAAATCGCCTAGGAGCC 130076 28 100.0 33 ............................ CCTCTGCTTACAACGACCCGAACGACCTTCGGG 130137 28 100.0 33 ............................ GAACGCCAACTCAGGGTGGGCGCAGGATCCGGT 130198 28 100.0 33 ............................ GTCGAATCCGAGTTCGCAGCTCGGACCCAGGTC 130259 28 92.9 0 .......................T.T.. | ACG,C [130272,130287] ========== ====== ====== ====== ============================ ================================= ================== 17 28 99.6 33 GTCCTCCCCGCATACGCGGGGGTCGAGG # Left flank : ATCGCCTCCGAGCCTGGCCCGGACGGCACCGATCCCTCTGCCGTGGTCGCTTCGAGGGTGTCCTTGATCCGCTGCGCCGTCGTGTACGTGTGGTCGACCACGGCTCGCCGGTCGACCACCACCACGTACCGCATCGGCACCTTCCGGACTGTGCCCGGCTCCCGCGTCACCCGTTCGAGATCTACCGCCAATGCCCACAGCCACGCCACCATCAGCGACGTCTTGCCGTACCCGGTGGGCACCACCACCTGCTCTAACGGCTCCCCAGCTACCAACTCGGCAGCCGCAGCCTCCTGCCACACATAGGGAACGTGCCCTGTCACCGCCTTGAAGAACACTGCGAACGAGGGCAAACCGCCAGGCACATCATCCGACCTTGTTGTCACGACCCCGACCGTAATCGCGCCCACCGACAACACAATGCGCGCCCGAGACAACGCCCCCTGGTAAGCTCATGCTGAAACACTTCACCGTCGCTGTATCACTGCAGGTCGGGAAGA # Right flank : GTGATGCACCAGCATCGACCACGAGAACCCGCTGCGGGGAAGGCATTACAGCATCTCGCTCTTCGGGTGCGACCGCGCTCCAGGGGACCTGACGGTCTGCAATTTCCTGGGACAGGGCCGCTCGGGCACACCGGCGATCCTGTCCCAGGAGCGAAGCCGCCACCGACCACACTCCCGACCTGGTGGCTTCCGATGAACCGTCCCAGCCGGTGCACGTCACCTGCCGTTGCCGGCGTCCCGCAGCTGAACAAGCAGCCGAGGCCAGTTCGTCGCTCATCGCCAGCATCGTCACCGTGACCGCAGCGCCCATCAGCGCCTGGGCTGCCCGAAGCACCATCGCAACAAAGAAAACCAACGAACTAGAGAGGAAGCGATCTGTGACAGCCCGCCGTTCACCAACAGCAGACAAGCCGCGCCAGGGGCCGTGAATTCCTCGTTCTGCCCTTGTCCTTGCCCGCAGGTAGGGCGGAGGATGCAAAGGAAGGAGCTGAACGTCATTC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCATACGCGGGGGTCGAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [45.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 1 36-918 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAGZ01000021.1 Austwickia chelonae NBRC 105200, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 36 28 100.0 33 ............................ GAGGTGGCGTGCCATGACATGGATGCGTCCTGT 97 28 100.0 33 ............................ GATGGAGCTCAACGCCCGGCGATTCGCGGAGGC 158 28 100.0 33 ............................ GGCCCAGCGCACCGGGTCCCCTACGAACAAGCT 219 28 100.0 33 ............................ GACACCCGACCGACCCTGTGCGTCGCTCAGAGC 280 28 100.0 33 ............................ TGAATGGGCCCCGTTCGCAGCGGGACCCATTCG 341 28 100.0 33 ............................ GGGCAGCCGGAGCTTGCGTCCGGTGTCGTCGGC 402 28 100.0 33 ............................ GACGTTGGGGCTGGAGAACAAGACCAAGCTGGC 463 28 100.0 33 ............................ GTGCCACCCGTGCCACGACATGACGCCAAGCGA 524 28 100.0 33 ............................ GTCGAACCCGAACCCGTCAGCGTTTGACTGCTC 585 28 100.0 34 ............................ AGTCCGGGGTGAGCGTCCATGACGCGGTCCCGGG 647 28 100.0 33 ............................ CCAGCTCCGAGACGCCGGCGTGCCCGTCTACGA 708 28 100.0 33 ............................ CCGCTGCTTCAGCTCGTCGACGTTCGCGCCCGA 769 28 100.0 33 ............................ GCATGTCGACGATATGTGCCCGGGACGTGTCGG 830 28 100.0 33 ............................ GACGGTGACTGCGGAACCGAAGACCGTCACGGC 891 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 15 28 100.0 33 ATGCGCCCCGCACCTGCGGGGATGAGCC # Left flank : CCCCCGATGTTCTTGTTGGCCAGGCAGAGGATCGCA # Right flank : CAACCCATAACCTTCTGCTCTGTGGACTCGCGGAATATTCGCAGCCGGTCACTCCTTCTACGTGACCAGCACATCTGGCCCTTTCCCGTGTAGCGTCAATCGCGCCTAGACGGTATGCCCTCTCGCCATCGGTGCTGTGTGAGCGAACGTGCACGCGCACGTGGATCTCAGGAGCAGTCTCATGGCGAAGAAGGGGAAGCCGCCGATCGGCTCCGCGCAGAGCGAAGCTGCGAGGCATCGCCAAGTACGAGCATTGACGCATTCCTGCTGGATACAGCCAGTTGACACGGCGAGATCAGCTGAGACCGACCATCCGCGCGTTGATCCACATCGCAGCGGTTCGCGCGCCGTCCTGATCCTCGGCAAGCGACCTCACGAAGTAGTCGACCTCCGCCGCCGACGTCCACACGAGGCTTTGACCATTCAGCTCCAGGAACAGAACCGTCGTGTGCCAGGCCAACCGCTTTTGCCGTCGGTGTACGCCTGAGCGCGCTGGATGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGCGCCCCGCACCTGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [21.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 36-979 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAGZ01000031.1 Austwickia chelonae NBRC 105200, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 36 28 100.0 33 ............................ GTATGTGACCAACGTCACTACAAGCGCATCAGG 97 28 100.0 33 ............................ GACGTGGACGATGTCCGCAACAGCATTCTCGGC 158 28 100.0 33 ............................ CTCGATTCCGCCGACGTTGATGCTGCCTGGGCC 219 28 100.0 33 ............................ CTCGAGCTTGTACATGGTCGGCTCCGGTGATAG 280 28 100.0 33 ............................ CGCCAACAGGACGACGGGGCCTGACCGCCCAAA 341 28 100.0 33 ............................ GAGGCCGCCCGCCTTCCGCATGGGCTCGAGGAC 402 28 100.0 33 ............................ GGTCCGCGGGTGGGATCGTATGGCGCTCACCGT 463 28 100.0 33 ............................ GTCACACTGTCTTTCGAGGATCGCCGGTTGGAC 524 28 100.0 33 ............................ GAACGGCATGGACCTCACCGAGCGCAAGGCAGA 585 28 100.0 33 ............................ GGCTCCGGCAGAAGACACCACTCGGGCTATGCC 646 28 100.0 33 ............................ CCGAGCAGGCATGGACGGGATAGCCACGCCCTC 707 28 100.0 33 ............................ GGTTCGACATCTTGGCGCCGCTCGGTCGGGTGC 768 28 100.0 33 ............................ GTTCTACTCGACGCTGCTGAAGGTCAAGGGCTG 829 28 100.0 33 ............................ CGGGCGTGCGTTTCGTCACAAGATCAGCGCGCA 890 28 100.0 34 ............................ GACAACCGTTCAGCTCGGCCTCGTCGACCTGATC 952 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 16 28 100.0 33 ATGCGCCCCGCACCTGCGGGGATGAGCC # Left flank : CCGGCGTCGACCCGCTCGGCCATGGCAGCCATGCGA # Right flank : CTCCCCGCGAAAACCGGGCCGGTGACGGGCGGGATGCGCCCCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGCGCCCCGCACCTGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [13.3-15.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0 Confidence: HIGH] # Array family : NA //