Array 1 6914-7168 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AFJQ01000160.1 Leptospira interrogans serovar Copenhageni str. Fiocruz LV199 contig_160, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                        	Insertion/Deletion
==========	======	======	======	====================================	=======================================	==================
      6914	    36	 100.0	    37	....................................	AAAGGATCCTTTGATCAAAAGAATTCGTCCTTGATTT  	
      6987	    36	 100.0	    39	....................................	GGACATAGGACCAAACTTCCCATAATGTATCGTTATGGG	
      7062	    36	 100.0	    34	....................................	AAGGGGAAAACATTCGTCACCCCGTGAAAAACTT     	
      7132	    36	  88.9	     0	.....................A........T..A.T	|                                      	G [7159]
==========	======	======	======	====================================	=======================================	==================
         4	    36	  97.2	    37	CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC	                                       	       

# Left flank :   AAATTGGCAAAAGTCACCGAAGAAGAAGACAATATATTTTATCTGACTCTTTGCACCAAGTGTGCTTCGGGCGCCCATACCCAAGAAAAAAAATCCGCGTGGCCAGAAGCTCCAAAAACATTAAAAATTCTATAATTCAAGTATCTCTTCAGGGCATAGACATAATTCTACTTAAAAAGCAAAACTAAATCTTTGAATCTATATTTAATTCCAAGACATATCCAATCTTTACTCGGATTCAGAAATAGACCCTATCTAATGATTGGCCAACGCTCGTTTTTCTTTCTTGTGAAAATTCCAGCTAAATTTATAATCAGTGACGAGCTTAAACATACTTGAATCTTAATATTTGAAACAAAATGATCCTTGGAAACAAAATATGCACTTCTGAAAAAACCGAACATGAAAAATAACGATAAAAAACGATATACTTGTTCTCCTCCTTTGAAAACACTCATATCCACAATTTATGCTTATAAAAGCCATTTAAATAAAATGCT
# Right flank :  TGAAGAGAAGATTTGTTTTGGCCCAAATTGTTTCGCACCAAACGTGCAAACAGATAAAATGTAGGAACTACTACTTTTTCGAAAAACAGTAGTTTGTTCAAAGAAATGTGGGAACTCCCACTTTAAAAAAAGTGAATTCTGGAGATCTCCTCGGGTAAGAATCGAAAATACCTAATTACAGTAGTAAACATAAATTTGTACTGACAATCATATTCCTCAGCACTTTGCCACTGTAATTGAAAGAACTGGTTACACAAATTCGATCTACCTCTGATGCCGTTTAGGCGATCCTTTCAGAAATTTCCAAATACTATAGAGAAGGTATATCATATTATAAACATGGCATGTTTTTTAGGGTATTTAAAATTATATTTTATTTTAATTTTAGAATATTCTAAAAATATTTTGTCTTTAAAAAATAAAATGGAATCCGAAAAATGAATTTCTCCGAGTATATTGTATGTCCATTCCGAACGTCATTGAGTTAAACTTTCCGGTCC

# Questionable array : NO	 Score: 2.72
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTGAATATAACTTTGATGCCGTTAGGCGTTGAGCAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-7.80,-4.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [73.3-63.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [1.05,0   Confidence: HIGH] 

# Array family : NA
//