Array 1 19691-16156 **** Predicted by CRISPRDetect 2.4 *** >NZ_AKZN01000027.1 Alicyclobacillus hesperidum URH17-3-68 URH17368ctg27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 19690 36 83.3 30 ..T..G.GCAT......................... CGGGGGACCAGACCATATCTGGTTGCCGGT C [19686] 19623 36 97.2 30 ........C........................... TCAGGTCTGAGTATGGTTCAGACTATCATG 19557 36 100.0 30 .................................... CAGCGCAAACAGCGCAATTGCGACGATGAT 19491 36 100.0 30 .................................... GACAGCTTTCTCAACCAAAACCCCTCCTGT 19425 36 100.0 30 .................................... TTCCTGTGCTGTCATACATCCTCTCCCTTT 19359 36 100.0 30 .................................... GACTTTTTCGACACGCTCGGCATAGAGCGA 19293 36 100.0 30 .................................... CGTGCCTGCGCACTTGTGTCCTGGCACGAG 19227 36 100.0 30 .................................... ATGCGGAGCAAGCGGTACACGGAATGCTGA 19161 36 100.0 30 .................................... AACTCATACGCGTACTGCTCCGATGCAGTC 19095 36 100.0 30 .................................... AAACTCATACGCGTACTGCTCAGCTGCAGT 19029 36 100.0 30 .................................... ACGCCCCCCCAACGAAAAAAGCCCCCGTTG 18963 36 100.0 30 .................................... TGTTATGAACAACGCCCAAACATCCCTTTC 18897 36 100.0 30 .................................... CAGAATGGTTCAATAAGGTTGAGGACATCC 18831 36 100.0 30 .................................... AGCCAGCGCCGACATAGTGACACCACGCCT 18765 36 100.0 30 .................................... CGCAAGTAGCACCAGACATTGTCGATGTAT 18699 36 100.0 30 .................................... ACTGTGCCAAGGCATCCCATATCCAACGCC 18633 36 100.0 30 .................................... AATCGGTCACTTGATACGAAGTCCTACCGG 18567 36 100.0 30 .................................... TTCATGGGCATACTCGAATGATGCCGCTCT 18501 36 100.0 30 .................................... ATAAGTGAAATGAATGATGCTATTACGGCA 18435 36 100.0 30 .................................... AAGCAGAGCCAACATACGCTTCATATTTTA 18369 36 100.0 30 .................................... ATAAGTGAAATGAATGATGCTATTACGGCA 18303 36 100.0 30 .................................... GCGAGGCTTCCACGGAACACTCAACTGATT 18237 36 100.0 30 .................................... TCCCAGCCGTTGCCACCGGCACCGAATGGT 18171 36 100.0 30 .................................... AGACATCCGCCGCGATCACAGCGGCGTTGA 18105 36 100.0 30 .................................... GTCATGAGTTACGCGAAAGATTGCCGCCAA 18039 36 100.0 30 .................................... GGTTCGCTTCGCCGCAAGCGCCCTTGACAG 17973 36 100.0 30 .................................... TCGATTTCGAACGGACGCACAGGCGGTGCC 17907 36 100.0 30 .................................... TCAAGGAATCGAATCGGAGTACACGGCGCA 17841 36 100.0 30 .................................... GTATCCTACGAGGACTCGGCGTTGATTGCT 17775 36 100.0 30 .................................... AGCAAACGTGAGTTATCCGATGCGCACGTT 17709 36 100.0 30 .................................... GCAAAGCGTTCTGGTTTGACACACTCGTTT 17643 36 100.0 30 .................................... GCCCTTCATGGACTTGTCGAACTATACCAG 17577 36 100.0 30 .................................... GCGATGAGATTCGCTTTGACGTCAGAGAGG 17511 36 100.0 30 .................................... CGAATGTCACGTCATGAAAGGGTGTAAATA 17445 36 100.0 30 .................................... CCAAAGGCATGTGCACGCTTGCGACTTGCC 17379 36 100.0 30 .................................... CACCAGCTCGTACAGCGTCTGCTCCACCCA 17313 36 100.0 30 .................................... CTCTCTGAGCTGCATGAACACATTGCGAAC 17247 36 100.0 30 .................................... TAGAAGTGTCGGCGGTGAATGAACGTTCCA 17181 36 100.0 30 .................................... AAGAATTGGAAAGGGTCGCTGGTATCATCA 17115 36 100.0 30 .................................... CGAGGCGACCGTCATGAGCCACGTTTCGTA 17049 36 100.0 30 .................................... TTAATGCGGGTATCATCTCGCAGAAGACAG 16983 36 100.0 30 .................................... ACACGTAACCGGATATCTCGCGGATGAGAT 16917 36 100.0 30 .................................... GGCTTCGATAAGTTGTTGTTCGCTTCCGTA 16851 36 100.0 30 .................................... TAGAAGTGTCGGCGGTGAATGAACGTTCTA 16785 36 100.0 30 .................................... GCAGATTGCCGAACAGGCCATCGAGGAAGC 16719 36 100.0 30 .................................... GATGCGGCTGATTCAGACGGGGCAAGACCC 16653 36 100.0 30 .................................... ATTCTGAATCTGATGTTCGATGGTTGTATC 16587 36 100.0 30 .................................... TCCAGAACCTCACGGATGATCCGCCAGATG 16521 36 100.0 30 .................................... TTGATTCTGAGGAAGACACGGAACCAACAG 16455 36 100.0 30 .................................... CGATTGGTCGTTGTTGGGTGCTTGTGAGAA 16389 36 100.0 30 .................................... TTCTGAAGTCTAAGATGCAGAATGAGCACG 16323 36 100.0 30 .................................... GTAAAGAATTTTAAGCACAAGCTGACTCAT 16257 36 100.0 30 .................................... ATCGGTTTGTGCCGCGTCGTAGTCCACGGT 16191 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 54 36 99.6 30 GTCATAGTTCCCTCACAAGCCTCGATGTGGTATGAT # Left flank : GAGTGTATCAAATGCTGTCTTGGCCGCCGAACCGACTGGAAGTTTACCGTGCCCTGCGAGAAACGCCGTAGTTACGAGTCCCATCATGTCTCCCCCAAAAACAGAGTATCCTCCACACGAATCTATGTCGGACATACGGGGAATAGGACAATCCTCTGGGCTGGTGCGTTATATGCAGGACGACACTGCTCTTGCATGTTGTTCATGTTCAATCGAGAGCTAGATCTTTTAGGGGTTGTTCATGATTGACCAGTTCGCCCTTCGGATGCTGTTCAAGCGCGTTCCGTGCAAGACCCTCAACGGGGTCGCATGCCTTGACCACGCGAAAGCTGTCCCCATCTAGATGTACAGGCAATGTATCTCCGGGGCGAATGTTGAATTGGTCACGCGGTTCTTCCGGTAATGAAAAACGCACGCTGGTATGTGCGAAAATCCATGAATGGTAGGTTAACGGCGCGGGGATCGCTCGCAAATTCGAAGTCTCACGCATGCAAACACAA # Right flank : ACGTGATCGCTCAATCCCTTGTAGTATCAAGGGTTGGGCGATTACGTATTTTTGAAAAAGCAAATCGCCAAGCCGTTTCAAAGCGGCGGTGTCACGTTTTTTAAAAAAGCACCAACTGCTCACTTTGCATTCTCCGTTCATTAGGTGCATAGTTACCAACAAGAATTTTCATCCTCATGAACTGCTTTTCTGTGACAAGTAACGTTCGAATCGATCCTTTATCTGGTAAGTTTGCTTGAAGCCTCCTTTCATGCTTTTCCGCCATCTCATAACTGCCGCAGATCCGACAGTAACAAGAATACTGCATCATATAATACCCATCATTCAATAAAAACTGACGAAACTGAGTTGCAGCCTTTCTTTCCGCCTTTGTAGTCACTGGCAGATCAAAGAGCACCATCAAGCGCATAATCCTACTCATAGACCCCCATCTGAACCTCCGTAAGCCTAGGCAACTGTAAGGCACTTGGATCTTCGGTTGAAATCGCATTTGAAAAGCT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATAGTTCCCTCACAAGCCTCGATGTGGTATGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: R [matched GTCATAGTTCCCTCACAAGCCTCGATGTGGTATGAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.60,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.05,4.5 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //