Array 1 1906-690 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADMOQ010000035.1 Phocaeicola vulgatus strain BSD2780120874b_170522_B7 NODE_35_length_56745_cov_35.7431, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 1905 33 100.0 35 ................................. GAATATGCGAGATTTGACGAACCGGGCAACCGACG 1837 33 97.0 34 ................................G ACGTGAATCCCATGCAGGCAACAGGTTTCCCTAT 1770 33 100.0 32 ................................. CAATTGACGGTTGTAAATGATGATCTTACGAA 1705 33 100.0 32 ................................. ATGATGTCTAGGGATGTGGAAGATGTGATGAA 1640 33 100.0 33 ................................. TGAATCCTATTCGGAAGAGGATGAAAGAAATGT 1574 33 97.0 34 ................................C TTATTGTGCTGATATGTTCTGTCTATCGTATAGA 1507 33 97.0 34 ................................G AGTTTGCTTTTACAGGCGTTGATCTTGAAGATGA 1440 33 97.0 31 ................................A TCTTATCTCCAAGACCTTTGAGATAGGTATA 1376 33 97.0 31 ................................A ATTCATTAAAAAGATTGCTCCTGATGGGAAG 1312 33 97.0 33 ................................C CCAACACTTTTACGATAAGACGGACAAGACGAT 1246 33 97.0 31 ................................A ATTATGCCGGTGAATCCTTGGAGATTAAATT 1182 33 100.0 32 ................................. CAGCATGTTTGCAGGTGCTGTTTTCGGGAAGA 1117 33 100.0 31 ................................. CCTGTGCCAGACTTTCCAAACTTCTGCCTGT 1053 33 97.0 33 ................................C GGAACGTGATAGAGTTTACCGATATAAACTATA 987 33 97.0 33 ................................A CGCGGATTACGGGAATTAACTGCGGCAAGTGTC 921 33 100.0 34 ................................. TTATAATAGGTTTCATGAATGTTCGGCATTTTGG 854 33 97.0 31 ................................A TATTCTGAACACATTGCAAATGTACAAAAAG 790 33 97.0 33 ................................A ATGACGAGGTGAATACGTGTATAGACAACCATA 724 33 90.9 0 ....................A.........G.A | TA [701] ========== ====== ====== ====== ================================= =================================== ================== 19 33 97.8 33 GTCACACCCTGCGTGGGTGTGTGGATTGAAACT # Left flank : ATATTGACGATTATCCGGTATTTCTTATAAAATGATTTTTAATTATGTACATTCTTGTGACTTACGATGTGGATACTACAAGCAAAGAGGGGGCTCGCCGTTTACGATGTGTGGCCAAGGCTTGTCTGGATTATGGACAGAGGGTGCAGAACTCAGTCTTTGAGTGTGTAGTGACGGAAGCGCAATATTCTCTTCTAAAAGGGAGAGTTAGGGATATTATTGATATGTCTCTTGATAGTGTTCGTTTTTATATTCTTAGTAAAAATGAGAATAAGAGGGTGGAAGTAATAGGTGTTGAAACGGCGTATAAACTTGAGGAGGCTCTTATAATATAATGCGAATGTGGTGTGTTACAAAAAAAGTAGTATCTTCGCATGTGTTAATAATCAGTAGATTAAATTATTTGTAGGGTATTTCTTTGTTATGAAGTTGAATAATAATGATGATTCGCATAACAGTGGATTAAATTTGCTGATTTATAATATGTTATTAGATATAGA # Right flank : TTGTTCACTCGTTGGTCAAGTTTATGGAAGAATTGTAAGCATTCGGCCTCTTGTGTATTTCTCTTCAAGCTGTTATAAAATCAAAAGCCAAACGAAGTACGTTAGGCTTTTGACTTTGTTATGACTGGAAAAAACACGCACAATCCCGGATGCTTATCTTTTGTCTGTCTTCTTTTGTGGTTTCACCTAGGTGACAATACATTGGCATCTAAGTGGAGAGGCGTAGTCACCCAAGTGATACGCTTGCTTCACCTTGGTGAAACTATAAATTCAACTAAGCGTTCCAGAGTAAATATATTATATTTTTTACTATACTATTCCTTGTTGTTTATTTGTTATATTGTTGATTATTAATGTGTTATTGTCTGTTTGTGTCGATTGTTTTTTCTTATCTTTATAAAATATATTAAAACATAAACTAACATGGAAATTGGTATAATTGACCTTTGTAAACAAATAGAAGATCCTAGTATGAACCGCAAGAAAGTCCATAAAATGGA # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.55, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCCTGCGTGGGTGTGTGGATTGAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //