Array 1 241242-242907 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI911471.1 Salinispora fenicalii strain CNT-569 B116DRAFT_scaffold_0.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 241242 37 100.0 39 ..................................... CAGAACCCTGAGATCGCATTAAAAGCGGCCCGGAAGGGC 241318 37 100.0 37 ..................................... GTGTACGACCCGTTCGGCAGCGAACCGGGCGTGACGT 241392 37 100.0 38 ..................................... CACAAAATCCATAAGACCTAACCTCATCCTTGAAATGG 241467 37 100.0 38 ..................................... CGGGGCTGAGTGCTGCACTAAGCCGACGCCCGCAGCAG 241542 37 100.0 38 ..................................... CTCGGCCAGATCGGCGGCATGCCGGTCTACGTCACCGA 241617 37 97.3 36 ....................G................ CCTGGTTTGCTTACTCCGCAGATCGACGCCGATGGC 241690 37 100.0 38 ..................................... TCCTCAATCCCCACCCCACCAACCGCCACAAGCTGAGT 241765 37 100.0 39 ..................................... AGGCTCCCATCGCTATCCGAAAGCGAGGAATCGATGAAG 241841 37 97.3 37 ...............G..................... GTCGCGTTGCCGTCGATCGTCTCGTACATTCGGTCGC 241915 37 97.3 37 .....................T............... GCCTCCGTCGGCTGTGTGCGGGGGCGCCGTACACCCG 241989 37 100.0 37 ..................................... CCTCGTTCCACGTGGGGGCGAAACACAACTCATCGAC 242063 37 100.0 37 ..................................... GTCGGCGGTGCGCGCGGCCCGCCACTCCGCCGTGGAG 242137 37 100.0 39 ..................................... CTCGACTACTCCACGGCACAGTTCGGCGCCGCGCGCACC 242213 37 100.0 34 ..................................... CGTACAGCTGTGTCGTAGGTCTTCGCGCACACCA 242284 37 100.0 39 ..................................... CTCGACTACTCCACGGCACAGTTCGGCGCCGCGCGCACC 242360 37 100.0 34 ..................................... CGTACAGCTGTGTCGTAGGTCTTCGCGCACACCA 242431 37 100.0 37 ..................................... GCTCGGTGTGCGGATCAGGCTGGCTTTCGGCGCGACC 242505 37 100.0 36 ..................................... CTCCGCCTTGACGAGTTGCCAGACGGTCCGTGGCCC 242578 37 94.6 38 ....................T..........G..... GGGCCGGGGTTGGACGTTGTACTCGGGGCGGTCGATCC 242653 37 100.0 34 ..................................... TTGCGCATGAGCAGCGGGCCGGTCTGGACGAGAT 242724 37 97.3 35 .....A............................... TTACTCAACGTGCAGTTGGACGAGGAAAGTCTGGA 242796 37 97.3 38 ........T............................ CCCGTGGCTGAGTCGACGGCCGAGGCGGGGATCAGCAG 242871 37 94.6 0 ..............T.................A.... | ========== ====== ====== ====== ===================================== ======================================= ================== 23 37 98.9 37 GCTGCGCCCGGCCTCCGCGCCGGGCGAGGATCGCAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGGCCGGAGGGTGGC # Right flank : CATGGTGCCTCCTCGGCGGTGTAGCGGGCAGCGAGGAGCTGCGCCCTCGGCGCCGGCGACTGACTACCTCCGACCAGTCCGCCGGAACTTCGGCGCCGTCTTGAGGTGGCCCGATAACGCGGAGGTGCTGATGTTTCCCGAGATACCGGGGAACCTCAGATACCCGATCGTGCCGCAGGGTGGGGCGGGTTGCGGGATATTGCGTACAGGTCCGGCGCTGTTGGGCCGTCGTGCATCATTCTGGGCGGTCGTCGTCGATCAGCCGGACCTGATCGTGTCATGGCATCAGATGGACGCGGATTCGTCTGGCCACCACCGCCGCATCTGCCAGGACGGCCAGGCGGGGCTCGGCGGATTCAAACAGGTGTGGATGACGCAGCAGTGCCAGTGGCGACAGACGCCGGTCTTTGAGTATCGCCTCGATCATCGATCGGTCGCCGCCACAGACCAGGGACCTGACTGCATCGTGCGGGTCGGCGACAACACCGGGTGCATAGGGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGCGCCCGGCCTCCGCGCCGGGCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCTGCGCCCGGCCTCCGCGCCGGGCGAGGATCGCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-16.20,-17.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [3.3-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 533-5 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI911472.1 Salinispora fenicalii strain CNT-569 B116DRAFT_scaffold_1.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 532 30 96.7 31 .............................T TCACATCGCCGGAGAAACCCCGGCCAGATCC 471 30 96.7 31 .............................A ATCGGGCCTCGGGTTTGGGCTCCGCGAGCAC 410 30 96.7 31 .............................C GGCGCGTCGGCCGCTTCACCGACGGGCTCAT 349 30 96.7 31 .............................T GGTGAGGATCAGTACGGCGGTAAGGGCGGTA 288 30 100.0 31 .............................. TCACCAGAGACCGCACATTTGACGACGGCAC 227 30 100.0 31 .............................. TGCACCTGGCCAGGCCGCGTAAGGAGATCCC 166 30 96.7 41 .............................A AAGTCTCTGTCGCTATTGGCAACCCCGACACCGCTGCCCAC 95 30 96.7 31 .............................C TGTACACGGGCGGTTCGGATACGACCTGGGC 34 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================= ================== 9 30 97.8 32 GTCCTCCCCACGCACGTGGGGGTGCTCCGG # Left flank : AAAGGAGCAAGAAGACCCGGCATGGCCAACTGACCAGCGGTGTCGTGCCTCAACGAGCCATCGCCTACAACATCCTCATACGAACCAGCACTCCGCAGCGCATCGAACGCGCTCCCGTCCTTCTTCTGAAACCCTGGGGTTGCCTTGCCGACATCGTGTAATCCCGCCCAAAACATGATCAACGATTTAGCGTGACTGTCGTCGGTGGCCAGCTCCTCCGTGATGACCCTCCGTTGGTTCGGGGCCAGATAGCGATCCCACAACGCACCAGCAACGGCCGCGGTATCAATCAAATGCCAGAGCAACGGATACGGTCTCAGGAGATGGCTAGACTTGCCCCAAATCCCAGCATCGACCCCGTCATGGTCGACCCCCAATCCGACCCCCTCCATTCGTACCCGCTCGGCAAGGGCATCAGCATGCAACCACAGCCATACGACACCACAACTCGATCGACGCAAAACCGCTTCCACGGCTGATAAACGCGCAGGTCACAAAGT # Right flank : GTCTG # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.59, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCACGCACGTGGGGGTGCTCCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCACGCACGTGGGGGTGCTCCGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [3.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 9970-11644 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI911472.1 Salinispora fenicalii strain CNT-569 B116DRAFT_scaffold_1.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 9970 30 96.7 31 .............................G CACACACCTGGCATGTGGTGTGGCAATTTGA 10031 30 96.7 31 .............................G CCGAGGGCACGATGGTTGACTTGGAAGACGG 10092 30 100.0 31 .............................. TGCCTCGCCAGAGGTTTCGGCCGCTCTCGCC 10153 30 100.0 31 .............................. CGATCGGATCATCGTCGCAGGACACAGGTCA 10214 30 100.0 31 .............................. TGTGGTCCTACGCCCTGGTGGTCTTGCTGGC 10275 30 96.7 31 .............................A AGTCGCCCATGGCTGGTTGCCGGATGTCATC 10336 30 96.7 31 .............................G TAGAGAACCCCCGAGTTAATAGCTCCGCGTG 10397 30 96.7 31 .............................A CGGCGATCAGCTCCTGGGCGTCGGCGAGGGC 10458 30 93.3 31 ............................AC CAACCCAACACGGCCGGACGGACCCGCTGAG 10519 30 96.7 31 .............................A CGGCGATCAGCTCCTGGGCGTCGGCGAGGGC 10580 30 93.3 31 ............................AC CAACCCAACACGGCCGGACGGACCCGCTGAG 10641 30 100.0 31 .............................. CATCGACCACGGACAACATGCCGTTGAGCGG 10702 30 96.7 31 .............................C GACCCTGCGGTACGGGGTGGCGGTGACCGCC 10763 30 100.0 31 .............................. ACCCGGTGAGGGCTTGGTGCTGGGTGGTGGC 10824 30 96.7 31 .............................A TTGCGTGTTCGAACGTCACGATCAGTCGTCA 10885 30 100.0 31 .............................. GACCTCTTCCATGCCCAAGGGACAGTCGCAC 10946 30 100.0 31 .............................. GACTGATCTGGATGGCCTTGATGGGCCGACT 11007 30 100.0 31 .............................. ACGCCGACGAGTTCGCTTTCAACACCCTGCA 11068 30 100.0 31 .............................. CCGACCGCACCCAGGAGGCCGCCCGGGTCGT 11129 30 96.7 31 .............................A CGCTGGTATCCCACTCTGCGGCCAGTTCCCG 11190 30 93.3 31 ............................AC AACGCGCCGCCGCCGCAACGCCCCGACGTAC 11251 30 96.7 31 .............................C CACGGGCCAGCAACTCCTAGCGGTCCTCGCG 11312 30 93.3 31 ............................CA AGTGGATGCGCCGGGTCGAACGTGTGCTCAG 11373 30 96.7 31 .............................A TGCTGATGGGAGTGTCTGACGAACGCGCCTA 11434 30 96.7 30 .............................G CGATCGAGACCTTCCGGACCGGCCGCCCGG 11494 30 96.7 31 .............................G TCTCGATAGAGCGCCGGTCCTCCGCCGATAG 11555 30 96.7 30 .............................C CCGACACGGTGACCAGCGGTATGTCCGCAT 11615 30 93.3 0 .........G...................C | ========== ====== ====== ====== ============================== =============================== ================== 28 30 97.2 31 GTCCTCCCCACGCACGTGGGGGTGCTCCGT # Left flank : TACCGACATCCAACATCTACTCGACCCCGACAGCACGCTTAAACAGCGGCAACCTGCCGCCGAAATCACCTCACTCTGGGATCCAGAGATGGGAGCCATGCCGTCCGGAGTTAACTACAGCTCAGACCCTTGGGACTAGCATGGCTTCCCTTATCGTCCTGGCAACCACCGCCGTACCCGATCACTTAAGAGGCGCACTCAGCCGCTGGATGATCGAAGTAACACCCGGCATGTTCGTCGGAACGCTCTCAGCCAAGGTCCGCGACGAGCTATGGAACGCAGCAAGCAGCGTCGTCGGCGACGGCGCCGCCGTCCTTATCCACCCAGACGACAACGAGCAAGGCTTCTCTCTACGGACCGCAGGAGCACGCAGACGCCGCCCGGTCGACTTCGACGGCCTCACCCTAGTAGCCATGAGCCCCAATGAACACCACGACGACGCTTCCACCCCAGCAGAAACCGTCTGGCCGGAAGGCTGGTAAAACCGCAGGTCAGTAAGT # Right flank : CAACATTCAGATTCGGCGAAGCCGAACTCCTTTATCCACGTGGCGTCCGGGGTAGCGCTGCTACGGCCGGAGAAGAACAGGTGTTCGCGGCGATGCTCGATGGCTGGCAACCCAGCAGACGGCGCGGAACCTGTCGTCGGCCATGATCACGGCGCGGTTGAGGGTGATCTGGGCGTTCGCCGAGCACGTCAGCAGCGACAGCGACCAGTCCGAGGCGGTCAAGGTCGTCACCCGCTATCACAAGACGCTGATCTGGGAGCAGACCAGGCACATGCTGCGGCTTCGCAGCGCACTGCGGGAGTACTTCCCAGCCGCGTTGGCCGCGTTCGCTGACCTGACCGCGTCGGAGGCGCTGGAGTTGCTGGCCAGGGCACCTTAGCCGGCTTCGGCCGCCCGGCTGCCCTTGACGAGGATTCTCGCTGCGGTTAAGCGGGCACGGCGCCACCACGCCGCGGTCAAGGCCGAGGCGATCCGAGACGCGCTACGGGCCGACCACCTGG # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.44, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCACGCACGTGGGGGTGCTCCGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCACGCACGTGGGGGTGCTCCGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 8-648 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI911473.1 Salinispora fenicalii strain CNT-569 B116DRAFT_scaffold_20.21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 8 30 100.0 31 .............................. AGGTAAACGACGCCTACGGGCATGACGCGGG 69 30 100.0 31 .............................. TGTCTGGTCCGGCCAGCTCGGCGAGCAGGTC 130 30 96.7 31 .............................G ACGACCCGCGGCTACGCGGCTGCTTCGTCGC 191 30 100.0 31 .............................. ATATCGGGGGCGGTACGTACCACAATCTTGT 252 30 96.7 31 ...T.......................... ATATCGGGGGCGGTACGTACCACAATCTTGT 313 30 93.3 32 ...T........................A. CGTGGTAGTCGCGAATCCGAAGGGCGGTGCGG 375 30 93.3 31 ............................CA AATAGAGAACTGCTGTCGGACCTCGCCGTCA 436 30 93.3 31 A.........T................... TCAGGGCTACGCTGCGGGCGCTGCCGTGCGC 497 30 93.3 31 ............................AG CTGGACCGGCGTAACCGGTTGTCCTGCCCTG 558 30 100.0 31 .............................. TGATGCGCTGCGACAACAGCAACCCGAACTG 619 28 70.0 0 ................GA.T..C.T.TT-- | TT [639] Deletion [647] ========== ====== ====== ====== ============================== ================================ ================== 11 30 94.2 31 GTCCTCCCCACGCACGTGGGGGTGCTCCGC # Left flank : ACAGGTCG # Right flank : TCCGTGTTTGGCCGTTGGGTGTGGTCGGGGTTGTTAGGTGGTGATCCGGTCGCTGTCGGCGAGGGTCAGGGCGTTGAGGGCCTTGCCTCAACCGTAGACCCGGCCGGTGATGCTCCCACTCTTGCGTCTCTGCCCGACGATGAGGTGCAGAATCTTCATCGCGGCCTGTTCCGTTGGGAGATGCCCGCGCCGGCGGGCGGCCTGCCGGCACCGGGCGTTCAGCGACTCGCTGATGGTGGTGGTGTAGAGGACCTTGCGGACCTCGTGGTCGCAGTCCAGCAACGGCACGAACTGCGGCCCAACAGGTGCGCCACAGCCGGATCACGGCCGGGTAGCGGCCGCCGAACTCGGCGGCGAACGCCTCAAAGCGGCCCTTGGCAGCCGCGACGGTCGCGCGGCGGGTCGAAGTCACGCGGCGGCCCATCAGTCACCCGGCGGCAGAGGGAGCCTGTCACGCCGGCCGGCGGGGGGGCACGGCCGGCGTGACAGGCGAGGGGAAA # Questionable array : NO Score: 5.58 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.61, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCACGCACGTGGGGGTGCTCCGC # Alternate repeat : GTCTTCCCCACGCACGTGGGGGTGCTCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCACGCACGTGGGGGTGCTCCGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [5.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 53180-53364 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI911473.1 Salinispora fenicalii strain CNT-569 B116DRAFT_scaffold_20.21, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 53180 37 100.0 38 ..................................... GGCTACCGATTCGGATCCCGCGACCTGCACCGTGACCT 53255 37 100.0 36 ..................................... TGGTGGCGGGGGTGCTGCTCGGGCTGGCGGTGGGGG 53328 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 3 37 100.0 38 TGCCGCAATGGAGACCGACCGCTACGGGCCGGTGAAG # Left flank : GGGAGCTTTCGCTGACCGCCAAGTCCGGCTTCAGCCTCGATGACGTGGCCAGGGCCGTCAACGCCGAGCTCAAGGCCATCGACACCGAGTCGTTCGTGGCCACCGAGACCAATCCGGCCAAGGCGACCTTGGAGACCAAGTTGGAGGTCGTCAAGCACGTCATCGCCATCCGTATCGCGGAGGACCAGGCGGCGAAGGCAGCGGCGGCCAAGAAGCTGGAGAAGGAGAAGCTGCTGGCGGTCCTAGGCCGCAAGCAGGACGCGGTCCTGGAGAACCTGACCGAGGCAGAGCTGCTGGCCCGAATCAACAACCTGTAGCCCGCCGACAATCAGCGTCTGCCAGCAGGCTCGCACATCGCCGAGAAGTACGGTCGCTGTGCAAGACCTGTGCGGCCAGGCCGGCACTCAACGGCCACTTCTCGGCGAACTCAATCGGTACAACATGCATGAACGATGACGTGGTAGTCAGCTATGGCTGATAGCTGCCCGGCACTCGCCCCA # Right flank : GGGCTCGCGATCAGCGAGGATAGCCACCCATCATTGTCCCACTCGGCGAGGACCCTGGTGACGAAATAGTCGAAGACAGGCCGGATCACATCATCCAGAATGTCACCGCTGTGGAGCCGAGCGATCAGGTCCTCGTACATCGCCCGTACACTCGCCTCCCGGCCATCCGGCGCATCGTCAGGTCCAACGCGAGACAGGTATGCGCACATCTCCCTGACCTGCTTTAAGAGGCTCACGATGTCGGCAAGGCACAGTCTTCGCACCATCCCCTTACCGATAGTGACCAGCAACGGCGGAAGTACCCGCTGGGCGTTCCCCTCGCCGTGCCGGACGAACAGCTCCGCCGGTTCCGCAGTCTGGTTCGCGAGAGCCCCAGCCAGCAGTCCGACGCAGGCGTCGGTCAGCCGAACCGGCGCCCGGCGGGCCCACGAGTTCACGGGCTTGGTCGAGTAGCGGTAGTCGGCCGAAACACGCCGCAGCAGTGCCGATCCGCTTACGTG # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGCCGCAATGGAGACCGACCGCTACGGGCCGGTGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.60,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [41.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //