Array 1 1630-2636 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSCY01000031.1 Coprobacillus cateniformis strain OF01-6 OF01-6.Scaf31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 1630 33 100.0 35 ................................. TTAGACATGATGTGATAAATAAGAGAACTATTAAC 1698 33 100.0 36 ................................. TTGTTTACGGGTCTTGGTACTCTTGCTATGGGTGCG 1767 33 100.0 36 ................................. CATCTTTTAAAGATAATGCAAGTGAAGTCTTAACCA 1836 33 100.0 34 ................................. AAATATGGGTATTCATGTCTTGTTTAGCGGTTCG 1903 33 100.0 38 ................................. ACTGGAGATAGTGAGTTAGGAAATAAGATTGTAAAATC 1974 33 100.0 37 ................................. TTTGATTTAGATGAAGATAGAAAGTCTATATTGAATG 2044 33 100.0 38 ................................. CCCTTCTAAAGTGCTTCCTAGAATAACAAGCGATCCCT 2115 33 100.0 36 ................................. AATAATGTCGCTGCGGCACTTGCTTGCTGGTCCTTG 2184 33 100.0 36 ................................. TTATCATAAAATGATGTGCTCCCTACATTTGCTTTG 2253 33 100.0 37 ................................. ATGATAAAGATAAGTTTTCTAATTTTAAGTGTTCTCT 2323 33 100.0 36 ................................. CTTAGAGAACAGTTTAATTGTGTTGTGTCTTGCTCT 2392 33 100.0 37 ................................. TTGCATCGCAAAGCCACGCATATATCTATAGGAGGTG 2462 33 100.0 38 ................................. TTGAATGTTCCTCTTGCTTTTACAGGTATTGTTAATTA 2533 33 97.0 38 .........A....................... CCATATGAATTGATTCTAATCTTTAAATTAGCGGTCTC 2604 33 97.0 0 .........A....................... | ========== ====== ====== ====== ================================= ====================================== ================== 15 33 99.6 37 GTATATAATCTAACCAATAGTTGGAATGTAAAT # Left flank : GTAAAAGATTTGACACATTGTTATAAGTGTGAAGAAAATTGCAAGAAAGGATTATTGAGAAAAATTAAACCATACACATTTACTCTATTTGCTAAAAAATATGGAGAAGAAAAGCTTTTGGATTGTTTAGAGAGAAATGAGAAAAATGGAGTTGTGTATCATCGAGATGGCATAAACGGAGATTATGATGATTTTGATGATGTAGAGCAGTTAATGAATTTTATCTTGACAGGAGTGCGATAAATCCCAGTTTGACAACTTCATATCCATACACACAAAGCAGTTAGTCTTAGGATTGACTGCTTTTTAAAAAGACACCATTTCAGTAATGATGTCTTTTGAGTGTTATTTTATAGTCATATCAAGGCTCATTCAACCGTGGTAAATTCGTGGTAAAATGAATGCTTTTTTATACTTCAAAATGCTTGAAAGTACAGTAGTTATACGGATAATCGAAAATTAGATATAAAATTTATATAAAAATAGTGTAGTATTTATGG # Right flank : TTTAAATGCTGTTTTGAAATACTGACTATACAAGTGATGAATTAAAGATTATAGTTTAATACCAACATATGATGTTTCGAAACTTAATGATTTATTTAATTATATTTTGTGAAGAAATAACAAAAAGAGAAGGACTTTACTTCAAAGTTAATTTTCTCCACCTTTATTCTAATAACATAGTTTAATTAATCTTTAATAGCCCATCTCATTTTGGTTGATTTGGCACGACTATTCATATGACATTCTTCTTTACTAGGTCTTATAACATTCCTTGCAGCATCACTATAAATACCAAGATTCTTCATTTCTTTAAAGGCCTTTTTAACAATTCTATCTTCTCCAGAATGAAAAGTAAGTATCGCAACTCTTCCGCCTGATTTAAGAATATTGGGGAGTTTTTCCATAAATTCAATAAGAACATCAAATTCATTATTGACCTCAATACGTAATGCTTGAAAAACTCTTGCAGCAGACTTTTTAATAGACTCTTTTCTTTCGTT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATATAATCTAACCAATAGTTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.20,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [81.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 3142-5809 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSCY01000025.1 Coprobacillus cateniformis strain OF01-6 OF01-6.Scaf25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 3142 30 100.0 35 .............................. ATAGGTGAAATGAGTATGACAGAATTTAAAAACGA 3207 30 100.0 37 .............................. TAATCCGACAATTATAGAAAACTCACCTTTTAATTAC 3274 30 100.0 35 .............................. TAATCTTTAGAACGGACTTCTGCAGCAACTAACAA 3339 30 100.0 34 .............................. TTAAACCAATACCGACTGGCAAAAGAATTGTTAA 3403 30 100.0 36 .............................. GGAGTATCGGATAATTTAAGTAACGCGTCGAATGGA 3469 30 100.0 36 .............................. TAATAAATTGAAACTGGAGACCACTTATCACCAGAT 3535 30 100.0 37 .............................. ACCATTCAGCCAGTTTTGCAATTGCTGCAGATTTTTC 3602 30 100.0 37 .............................. ATAAATGGTTTTAAAAAATCTTGTTGTGTAGTCGATA 3669 30 100.0 35 .............................. TATATATAATCGTATACGTATCCATTTCCTGCTGT 3734 30 100.0 35 .............................. TTCTATCAAAAGCCATTTTTTTTACCTCCTTTTTT 3799 30 100.0 37 .............................. TGAAGTAGATGCACTCGACTATTTTAATGATCATAAG 3866 30 100.0 36 .............................. TAAGAAAGTAGGTGAATTGGAAATGAATGGAAAAAA 3932 30 100.0 36 .............................. TTATAGCCGAATTTTCCACTGTCGCTTTTATTACAG 3998 30 100.0 36 .............................. CACAACATCAAAAGAACACTTAATTGAAATTGAAGA 4064 30 100.0 36 .............................. AACAATACTTTAAAACTTGTAAGAGTACAGAATAAA 4130 30 100.0 37 .............................. TCGGATTCAATTCATATTCATTTTCAAAAATATAAAA 4197 30 100.0 36 .............................. ATAAGAGATTGACGTGAACGACTAAGTGAATCATTC 4263 30 100.0 37 .............................. GGACTTGTTGTATGTTCTAAATGTGGTAGAAAGATGG 4330 30 100.0 35 .............................. TTAAACAAATAAAAAAAAGAGGTACCCTCCGCCGG 4395 30 100.0 37 .............................. CTTTTTAATTTCTTGTCTGGATATAAGGAACAATACA 4462 30 100.0 35 .............................. AATGACCTACCTTTATTGGTTATAAACAGTCATTT 4527 30 100.0 35 .............................. AATATTTAAATTTATTAAGCATGAAGAATACTATG 4592 30 100.0 36 .............................. TAACGATATGACGTTTATAAAATCCAAAATCCTTTA 4658 30 100.0 36 .............................. TTTTGCAAGCCTCAAAGAAATAATCCCAAGAAAAAC 4724 30 100.0 35 .............................. GCCGTCCGAAGAGGTTGATAAGGTTAACCCAATCC 4789 30 100.0 36 .............................. GGAGAAGACATATACATATCTTGCATATGATCTTCT 4855 30 100.0 37 .............................. TCTAAGAATTGCCACAACTGATTGTTTTCAAAATCGG 4922 30 100.0 35 .............................. TCAGAAATATCTTCAACTTCCTCAAACCCCTTTTT 4987 30 100.0 36 .............................. AAATACTACTGTTGCTAATGTTGTACGTAATTTATT 5053 30 100.0 36 .............................. TTATAAATTTTAGGACATATATTTGTATAAGTTTTT 5119 30 100.0 36 .............................. TGCATAATCAACGCCACTCAAGAAAGGAAACAAGAA 5185 30 100.0 36 .............................. TCATGTGTTAATAGATATTGGCCTATTTTCTTAGCG 5251 30 100.0 35 .............................. ACATAATTGACCAACTAGGTGGAGAGTTTGAGGAT 5316 30 100.0 38 .............................. ACACATGGGCTAAGAACATTAGTTTCCCAACACGTAAA 5384 30 100.0 36 .............................. TTATCCATTAAATAATCTATGCTCACTTGGAAATAA 5450 30 100.0 36 .............................. TATGCTAGCTCGTATTTCTCTTTCAAGTCATATCAC 5516 30 100.0 35 .............................. TACATCAAGATGTAATCCCTTTATACGACTATTTC 5581 30 100.0 36 .............................. TTTGATGTGTAAACAGTCTTCGCTCTTTGATTAACT 5647 30 93.3 37 ........C.........G........... TAAGTTGGGGGGAGTACTGACTATGCAACAGGGAGGT 5714 30 96.7 36 ........C..................... TAATAATCAACAGTCTGTTTTTGTTTATAAAGATAG 5780 30 93.3 0 ........C....................G | ========== ====== ====== ====== ============================== ====================================== ================== 41 30 99.6 36 GTTTAATATCAACATATGATGTTTTGAAAT # Left flank : ATCTCACCAATTTCAGATACAACAATTATGGCATCAGCAGGTGCACAATGTCATCATGTTGGTCATGTTTCTACACAACTTCCTTATGCGATGGTTGTTGCAGTTGCATGTATTGTTGGTTATATTGTTGCTGGTCTGACACAGAATGTTTGGCTAACATTTTTAAGTGGCTTGATAACTTTATTAATCATGATATTTTGTATTAACAAGAAAGGCTAACCCTGTTGTGAAAAGATAAAAAGTTAAAATATGGTGTAAAATTAAAGATGATAATCTTATTAGAAACAGTATTGTTAATATATTTTATATGTTTGAATTGATTATAATTTACCAGCAACAATTATTGATATAATCAAAAAAACATTGAATATATCACATAAAAATAGAATTTTATGTTGATTTATGATATAATTATTTTTATTTGGTAAAAATATGAAAAAATATTGATAAATTCAATAGAATTTTATTTCTGCCAGTTATGAAAGTGTTGTTTTATCTGG # Right flank : GTTATTTATAATAAAAATATCCCTATATTAAGATGCTATAGGGATATTTTTTTATCTTCAATTTCTATTTTAATTTTTTCATAAAGTTCATATGTAGCAATACAATCAGCAATTGATCTATGTTCATTATTGGAAAGGTTTAAGTATTGGACCATATCTGTTAAACGATGATGTTTCATGTGAGGATAGACCTTTCTACAAAACTGAAGTGTATCCATATATTCATTTTCAATATCTATATGAAATTGATTTGCAACAAAGTTTAAGTCAAATGATGTATTGTGTCCTAATAAAATATCATCACCAATAAAACTGAAAACATCGTCTCTAATCTCATCAAGGGTTGGCATTCCTAATAACATATCATTTGTAATTCCCGTGAGTTTGGTTATAAAAGGGCTAACTTCACGTTCTGGATTAATGAGTTGAGAATATTTATCTATAATTTGTTGATTTCTTATTTTTAAAATTCCAACTTCAATAATCTTATCATCGGCCCA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAATATCAACATATGATGTTTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //