Array 1 150930-149641 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANSC01000003.1 Neisseria meningitidis NM3652 NM3652.contig.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 150929 36 94.4 30 ........G...A....................... TTTTTGTATCCATTCCCAGCCGGAAATTAA 150863 36 100.0 30 .................................... CTTCTGCCTTTTTACAAGCTCGCTTTCTTT 150797 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 150731 36 100.0 30 .................................... CTTTAACTTTGACCGTGTGCAATCCAGTTA 150665 36 100.0 30 .................................... AACGGCAACCCACTAAATTTTGCAAATGCG 150599 36 100.0 30 .................................... AGTATTCGTCGATGATGGAAACTCGAGCAT 150533 36 100.0 30 .................................... ATGATGCAGGCTGCTCCGTCATCGTCTGCA 150467 36 100.0 30 .................................... CCAAATAGAAATACATACGCCGAGTAATTA 150401 36 100.0 30 .................................... TACCCACGGCGGAAACCATTGCCACAAAAC 150335 36 100.0 30 .................................... TTAAAATAATAACCCAATACACGATGTTAA 150269 36 100.0 30 .................................... TCCTGCCAATTATCATACATAAGATTTTGC 150203 36 100.0 30 .................................... TTGCGTCTATGGTGTCCTTTGAGATGTCCA 150137 36 100.0 30 .................................... AAAACCAACCGGGTATTCATACACAGCCAA 150071 36 100.0 30 .................................... CCGTTGATGACGGATGTGTCGGGTTGCGGA 150005 36 100.0 29 .................................... TCGGCCGCTTTATTTCTGCCATATCGACG 149940 36 100.0 30 .................................... CCTATGCCTGTTATTGTTTTCAGCCTTTTG 149874 36 100.0 30 .................................... TTTAAAACCGCAAACCAGTTTGTATCCTAT 149808 36 100.0 30 .................................... AATAACAACCATTTTGTTATTTCGATTTTT 149742 36 100.0 30 .................................... TCCCGACATTGACGGAAAAACCCGAAAGCA 149676 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 20 36 99.7 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTCTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //