Array 1 28109-29475 **** Predicted by CRISPRDetect 2.4 *** >NZ_PHIG01000035.1 Minwuia thermotolerans strain SY3-13 742-36, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 28109 32 100.0 36 ................................ GATCCGAACCTCGGCCGGGTCATGTGGACGGAGCCG 28177 32 100.0 35 ................................ GCTATGTCGACGACAGTTCGCGCCTGCAGGGACCG 28244 32 100.0 35 ................................ ACGGTCATCATCAACATGCTGATCGGCTGGGTCGC 28311 32 100.0 35 ................................ CACGACCAGTACGACCGGGTCGACCAGTTGATGAA 28378 32 100.0 35 ................................ CCGACGTGAAGGACAAGGTGACCGACATGGCGAGC 28445 32 100.0 34 ................................ ACCGAGCGGAGCTCCAACGTCCGCAAGATCACCG 28511 32 100.0 35 ................................ GCCAATGCGATCGAGACCCTGTTCCGATCCATGCG 28578 32 100.0 35 ................................ ATCTACGAGACCGACGGCGCCGGCCGCCCTGCGCG 28645 32 100.0 35 ................................ CGGAACCTGGAGTTGAATCAGCGCGTCGACATGGT 28712 32 100.0 34 ................................ GAACTGATCGACCGCGGTCTCCGCAAGGACGACC 28778 32 100.0 35 ................................ AACTCAGCGCGCTGTCTCGTGACCTGGAACAGCAC 28845 32 100.0 34 ................................ CATCGGCTCTACACGCGCAGCCGCAGCGACGCCG 28911 32 100.0 36 ................................ GCCGTGAACGTCGGTGTCGACCATGATCCGGCGCCG 28979 32 100.0 34 ................................ GTCAAACGCGGACGGATAGAACATTGCGATGCAG 29045 32 100.0 35 ................................ TCCTTGCGGCCCAGCGCGATTTGTATGATGATGAA 29112 32 100.0 35 ................................ CGCGAGTACATCCCCGGCCTGCGCGATGGCGGCGA 29179 32 100.0 34 ................................ TCGCTGGACCCGAGCCCGGAGGTCCGCGAGTTGC 29245 32 100.0 34 ................................ CTGAACGCCGGGATTGATCTGGTGAGCGGGTTGT 29311 32 100.0 34 ................................ GCGTCGCTGCTGTCGGAAGTGGTGCGCGCGATCC 29377 32 100.0 35 ................................ GCCTGTTCCGCGACCGAGGGCGGTCACACTGGCGA 29444 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 21 32 100.0 35 GTCGCGCCCCCTGCGGGCGCGTGGATCGAAAC # Left flank : CCCTTTGTCTGGAAATGAGTTGCGGCCATGATGGTGCTGGTTAGCTACGATGTGCAGACGGGTGATCCCGGCGGGGCCAGGCGACTGCGGCGCATCGCGCGAGCGTTGAAGGACCATGGTCAGAGGGTTCAGTACTCGGTGTTCGAATGCGATGTCGAGCCGGCGCAGTGGGCCATTCTGAAACAACGCCTGCTCGGCGAATTCGAGCCCGACAAGGACAGTCTTCGATTTTATCATCTGGGGGGCAATTGGCATCGCCGGATCGAACATCACGGCGCCAAACCCGCCATCGATCTGGATGGGCCGTTGTTGTTTTAGCATTGCGCGAACCCAAAGCGGTCGCGATCTGCCCGGCAGGTTCGCGCGGCGCGTTCTTTGAAATTGTACAACGCCTTGGCGAGCCCTTTCGGGGACGGTTGACTTACGATCCGGCCCGAAACGGCTGGTTCGCGCAATCGGCCCATTTCTCTCCAATGTTTCAGGGAGTTATGATACCCGCA # Right flank : CGCTGCTTCAGCGCTATCCGTTCCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCCTGCGGGCGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCTCGCGGGCGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.80,-7.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [46.7-15.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 210795-209364 **** Predicted by CRISPRDetect 2.4 *** >NZ_PHIG01000039.1 Minwuia thermotolerans strain SY3-13 764-40, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 210794 32 100.0 36 ................................ CGTCCACCGTGGCCGTGTCGTCCTGCGCATCCGGGC 210726 32 100.0 34 ................................ CTCTCGAAGCCACGGACGACCCGCTGCGGATGCT 210660 32 100.0 35 ................................ CGTGATCGGGAATACATCATTGCTCATCGCTTCGC 210593 32 100.0 33 ................................ CAGCCCGAGTCTCTCGCGATGCCAGCGGTCCAC 210528 32 100.0 35 ................................ CGTGCGCGCCCATCGCGCTCTCTATCGCGTCGTAC 210461 32 100.0 35 ................................ ACCGCAAGGTGTTTGAGTGCCGCATTCGCCCCGAC 210394 32 100.0 35 ................................ ACTCAATACCGGCGACATACGAACCATCTTCGCCG 210327 32 100.0 34 ................................ GCCGCTCAATCAATCCCAGCATATCGTCTCGGTA 210261 32 100.0 33 ................................ ACGCGAGGCTGGGCGGACGTCGCGACCGTCTGG 210196 32 100.0 35 ................................ TACCGCGAGCAGCGCGAGCGCCGGCAGCGCCTGCG 210129 32 100.0 35 ................................ ATCCGAACGTGAGCGGGGTCCACGTGCCCCAGATA 210062 32 100.0 34 ................................ GTAACCCCGCCATCCTGAATGTCGATGACAATGC 209996 32 100.0 34 ................................ TCTGTATGAAACTCTATATCCGCACGCGCATGCG 209930 32 100.0 35 ................................ TCCCCATAGTACGGGCCGCGATAGCCGTAGAGCGG 209863 32 100.0 35 ................................ TCCGGAAGCTCGACGCCCTTCTCGGCCGCCATCTC 209796 32 100.0 35 ................................ ATGACGTGGTAGGTGCCGCCATGGGCGACGATCTC 209729 32 100.0 33 ................................ TTCATGAAGCAGATGAGCGCCGTGACGCCGGAA 209664 32 100.0 34 ................................ TCGCATATCTGCTCGCCGTCGCCGCCGTTATGGC 209598 32 100.0 34 ................................ TCCCTTGCTGATAAATCCAATATAATCCGTTATC 209532 32 96.9 34 .......G........................ GTGGAATAACTGGAGGTCTAAATGAGGTATCGTC 209466 32 96.9 39 ..........................A..... GTAGTTGCGCATCAGCCGCCCGTTCCCCCGTTGCTCCGC 209395 32 96.9 0 ..............................C. | ========== ====== ====== ====== ================================ ======================================= ================== 22 32 99.6 35 GTCGCGCCCCCTGCGGGCGCGTGGATCGAAAC # Left flank : CTATCCGTTCCCGCTCAAATGG # Right flank : ATGGTCCAATTGAAGGCGTCGTTCGACAGGCCCAGTTCGCGCGACCTCTAAAGGCCTGGTGGCTCAATCTTACGGTCCATAGACTACCAGCCAGCAATTTCACATTGCATTGGACTTCGCCCGGCAGGCAAGCATGCATGCTGTCGGGACCGGCGGCGCGGACATGCGCGGCCGGTCCCGGCCCGGCCTCCGCATCGCGGTCCGGGCTTCTCCTGGTGACAGCGCCGGCATCGGGCTGGCGCCGAACGAAGCCACGGAGACCGACCATGACCAAGCTCAATGACAGGCATATCGCCATCCTCGCCAACGCCGCCAACCGTACTGACGGCTGCGTCCTGCCGCTGCCGGAAGGCATTCAGGTGAAGGGCGGCGCACTCACTGCCATGCTGCGGGCCCTGGAGCGCCGCGGCCTGGTCGAGCGCTCGGCGGACGATGCCTGGACCATCACCGAGGCCGGCCGTGCAGCGGTCCCAGGGGCGGCCGCGACTGAGGCCGGCGAG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCCTGCGGGCGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCTCGCGGGCGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.90,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-16.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //