Array 1 1217399-1219688 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP056350.1 Citrobacter sp. RHBSTW-00678 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 1217399 29 96.6 32 ............................T TTCATTCCATCCTCCGATATTAACCACGTGCG 1217460 29 100.0 32 ............................. GCTTTCACCTAAATTTGCTGTTCAGGTTTCAA 1217521 29 100.0 32 ............................. CGGGCAATTTGCGTTTCAGGGAACTGGCTCTT 1217582 29 100.0 32 ............................. TCTGCTCTCTCCATCGCCGTCATTGAGGCGAC 1217643 29 100.0 32 ............................. ACAGAGGGAGGCCGCTGTCGGGTGCGGTTCGT 1217704 29 100.0 32 ............................. CTGGCCAATCTGGAAAAATTGCGCGATGCCGT 1217765 29 100.0 32 ............................. CTGAGGTCTGCGCTCGCTGATGAGGTGGAAGA 1217826 29 100.0 32 ............................. ATATTCAGAAACTCGGTGAGCGTCTTGGTTTG 1217887 29 100.0 32 ............................. CCTGTCATTCGTTTTGATGGAAATATGCTTCA 1217948 29 100.0 32 ............................. CAAACCGACGAAAAAATCACGCATACCGTCAT 1218009 29 100.0 32 ............................. TGCATCTGGAAGCTGGCAAAGTAGTTACAAAG 1218070 29 100.0 32 ............................. ACGAGCATACGGAGGTGGTTTGGGTACATGAA 1218131 29 100.0 32 ............................. GCGTAACCCCAGCTTCTCTAGCATCTGCTGAG 1218192 29 100.0 33 ............................. ACCGCTGGCACTGGCTGGAGGCTCGCCATTGGG 1218254 29 100.0 32 ............................. CCATCAACCCTGATTTCAATACGCACGACGAT 1218315 29 100.0 32 ............................. TAAAGTACCAATAGTACATATTTAAGATAAAA 1218376 29 100.0 32 ............................. ATTACCAAAGGCAGCCTGAACGGGTTTCGCGT 1218437 29 100.0 32 ............................. AAACCAGACCCGGCGTTGGATAAGCCTCTGCC 1218498 29 100.0 32 ............................. ACAGCCAGATCAGTGGCGTCTTTATGATCTCG 1218559 29 100.0 32 ............................. CGAACAATTTGAACATAACGAGAACCCCGCCA 1218620 29 100.0 32 ............................. GCGGCGCAGCGGCTGCGGCCATCACGCCACGC 1218681 29 100.0 32 ............................. CCGGGTAAAACCATAGGAAAAATCGGGTATGC 1218742 29 100.0 32 ............................. TTTCGTGGAATTGAGATATAGCGACTGACCGA 1218803 29 100.0 32 ............................. AACGAGGGGGCAATTGAGCCGGACGTTGACGG 1218864 29 100.0 32 ............................. ATATTGAGGACTCGATATCGATTGCGATGATG 1218925 29 100.0 32 ............................. TTGCCCGACCAGGCTTTCACTGACGTGCTCAA 1218986 29 100.0 32 ............................. GCATACGGCAGGATTTACGAAATTACTATCAA 1219047 29 100.0 33 ............................. GGTATTCTTTGTCTGAGTAACTGCCTTTTCTAA 1219109 29 100.0 32 ............................. ATCCTAAACAACAGCTCGCCTATTTGGCCGTA 1219170 29 100.0 32 ............................. ATATCGCCGCAGCACTCACGCAGTTTGCCACC 1219231 29 100.0 32 ............................. CAGGGATAGTCAGCAGCGTTCGCGGTCCCGGC 1219292 29 100.0 32 ............................. GTTTGAATAGTGCATTCATTATTTGCGGGAAC 1219353 29 100.0 32 ............................. AGCGGGGTCGGAGTTACTTTTTGTTTTCGCGT 1219414 29 100.0 34 ............................. ATCGAATATAGACAGTAAGCTAAATTATGCAAGT 1219477 29 100.0 32 ............................. GTGCGCGGCCCCATTTAGCAGGGCGTTTTGCG 1219538 29 100.0 32 ............................. CGCATAGCCGAGCTGGAGGCGCGGACGGTGAA 1219599 29 100.0 32 ............................. TCTCTGGCCGCGTTTAAATACTCAGTCGAGAA 1219660 29 93.1 0 .........................T..A | ========== ====== ====== ====== ============================= ================================== ================== 38 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGACGCTGGCGAAATAGACCCTCCGCAGCCTGCGCCAGATATGCTGCCGCCTGCAATACCGGAACCGGAATTGTTTGGAGATGGTGGTCATAGGGGGCGTGGTGGATGAGTATGGTTGTCGTTGTAACGGAAAACGTTCCGCCGCGTCTGCGAGGGCGTCTCGCCGTCTGGCTGCTGGAAATTCGTGCGGGTGTTTACGTTGGTGATACCTCTAAGCGAATTCGGGAAATGATTTGGCACCAAATCATACAGTTGGGCGGAGCGGGAAACGTTGTGATGGCCTGGGCGACAAACACGGAGTCAGGTTTTGAGTTTCAAACCTGGGGAGAAAATCGCCGTATTCCGGTAGATTTGGATGGACTTAGACTAGTGTCTTTTCTTCCTTTTGATAATCAATAGGTTGAGTGTTCTTTAATAAAACGGAATTGTTGTTCCCAAGTTGGTAGATTGTTACTTGATGAAAATTGCAATAGAAAACAGTTATATATATTTAGT # Right flank : ACTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTTCCCGCTTTTGCCAGTTCTTTTACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCTGCGTTGTCGAAGACCTCTGCGTCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGTGCCCGGTCGCGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //