Array 1 7321-9135 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWTJ01000026.1 Streptobacillus moniliformis strain VK105/14 contig_57, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 7321 36 100.0 30 .................................... AAAAATATTATGAATTAATGAGTGAAATTG 7387 36 100.0 30 .................................... TTTTTAAATTTTCGATAGTTTGGACACTTA 7453 36 100.0 30 .................................... TGAAGTTTTTCCGTTTCTTTGTTTTGCAAT 7519 36 100.0 30 .................................... AAAGTGGAAAAGCAATAGACATAGTAATAT 7585 36 100.0 30 .................................... GAATTAATCCAATGCTAGCCGGTTTAGGAG 7651 36 100.0 29 .................................... TTTATAAACAATCTATTGCACGATTTTAA 7716 36 100.0 30 .................................... TGAAGTTCTTCCATTTCTTTGTTTTGCAAT 7782 36 100.0 30 .................................... AGTTCTAGAAGAGAAAAAAAAGCGAAAGAA 7848 36 100.0 30 .................................... CGTTAGCAATAATAAAACCTATTCCAACAT 7914 36 100.0 30 .................................... AAAAACACCGAAAGTTGAAAGAGAATATTC 7980 36 100.0 30 .................................... AAAAAATTTGGGGAAAAGGATTGGTCGATG 8046 36 100.0 30 .................................... TTTGTGCCGCTTTTATTAAAATGTCTCGAT 8112 36 100.0 30 .................................... AAAATTTAAATATATTTGTGCAGGAGAATA 8178 36 100.0 30 .................................... AATAGAAAATGTAAATGCTAAATACACTTC 8244 36 100.0 29 .................................... TCCTCTTTTGGCTTATAATTTGATTTTTA 8309 36 100.0 29 .................................... AAAGGAGGTTAATTAATGTCATATAAACA 8374 36 100.0 30 .................................... CTGAAATAATTATCTTTTTTTATATAGTTA 8440 36 100.0 29 .................................... TGGTCTTTTGAAAGCTGAACCGTACTCTC 8505 36 100.0 30 .................................... AAAAAGAAAACGAAATAATGAGGGAGAGAG 8571 36 100.0 30 .................................... ACAATTCTCAGCAAATAGGAAAAGCAATCA 8637 36 100.0 30 .................................... AAGCAAATGGAATGTCATTACCCGAAAATA 8703 36 100.0 30 .................................... GAATAGACCTATTTGAATATGATACTAAAA 8769 36 100.0 30 .................................... AACTATCAAAAAAGATGAGAGATAAAAGTT 8835 36 100.0 30 .................................... ACAATTATTAACTCCAGAAATGGATTATTC 8901 36 100.0 30 .................................... TAACTCTAGTTTTAGAGCAATCAATTCTGA 8967 36 100.0 30 .................................... TAAAATATGCAAGCGATAGACTAAAAGATG 9033 36 100.0 30 .................................... CTTCAATGTTAACTGTGTTTATAGAAAGTT 9099 36 72.2 0 ......AC.....AC.......A......A.TT.CA | T [9132] ========== ====== ====== ====== ==================================== ============================== ================== 28 36 99.0 30 GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Left flank : AAAAGTTATCTAAACTTTTTAGAAGAAGGTAATGAAATGCTGGCTATACCTGAAATAATAAAAATAGATTTTTATGACCTTTTTAAAGAGTTATAGAGAAATGAGATTACTTGTTTACTTTGATTTGCCAGTATCAACTAAATTAGAAAGAAAACAAGCTCAGGATTTTAGAAAAAATTTGTTATCTGAAGGATTTATTATGATGCAATTTTCTTGCTATTCAAGATTTTGCAGAAATGATGCTGAATCTTCAAAATATTTTAATAGAGTAAAAAAATTGAGTAATAAATTAAGTGGTGGAGAAGTAAGAATTTTAAAAATTACTAACAAACAATATGAAAATATGTTAATATTAGTAAAAGAACCTAAATTATCTGAAATAAAGCTTTCAAAAAATCCATTGGTTATTTTTTAGTGTGAATTTTGTGCTAATGGATTGATTATTTAAATTTCAAACTGTATTTTCTAGCAATAAAATTATATTAATTTCATTGCTAGAG # Right flank : ATTAAAAAAATGATTTTTTGTGTTGACTTTTTTAAATATTATGCTATAATAATTGTGTAGATAAGATTCACATTATTCAAGTTTACTACAGATTCTGTATTAAGATACAAAATCGTAAGACTGGCTGCCTTAAGCAGCTTTTTTTATTTTAAATAATTCTTAATTATATCAAATTCTTTTTCTTTTCGGATTTTCTCTATTTTATTTTCTATTTCTTTTTCTGAATAAAGGTATACTTCATCAATAAAATTAATATATCTAGGTAACTCAACTAGTTTGTTATTATCAATAAATAATACTTTGTGTCCACTAGAAACTAATTCATATACTATATCTTCATTTTTCACAAAAAATATACATTTTGTATTGAAATCCTTTATTTTAGATAATATATATGATACTTTTTCAAAAAATTTATTCTTAGTATAAATACTATCAAAATCATCAATCAATAATACAGTGTTATCATTTACACTAATTAATCTATTTAAATATATTTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //