Array 1 2569-2867 **** Predicted by CRISPRDetect 2.4 *** >NZ_VICD02000168.1 Lysobacter maris strain KCTC 42381 383, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ================================== ================== 2569 23 82.6 31 .C..C.AG............... ACCGCCGAGGCCGGCCAGCAGTACGGCGACC 2623 23 100.0 31 ....................... CGGATCCACGAGAACGCCCGGGTCCGCGATG 2677 23 87.0 31 C...A..G............... AAGGTCGCCGCGTCGGCGCATACCGGCGCTC 2731 23 100.0 34 ....................... CGCCTGGAAGAGACGGTGACCGTCGACGGCAGCA 2788 23 95.7 34 ....A.................. TTCGTCGGCCGCCAGGGCCGGGTCTCCGGCGACG 2845 22 87.0 0 .C.....G.........-..... | G [2865] ========== ====== ====== ====== ======================= ================================== ================== 6 23 92.0 32 TGGAGACCGTCAACGGCAGCATC # Left flank : GCGGCCCTCGGTATGGATCAGGGTATGCGGCGCCTCCGCCAGCAGTGCGTCCCAGTTCGGCAGGCGGGCGGCGGCGAGCGCGTTGTCGGCGGGGTCTTCGCGGTGGCCCCAGCCGTCCAGGATCAGCAGGACGACCGGCTTGGTTCGGGCCGGCTTGGCGCGGGAGATTTCGGACACGATGGCGGGGTTCCGTGACTTCGGGCAGGGGCCCGGGGTGCATGAGAGTGCGATTGTATCGGAGCGCCCGGCGACGCGATGTCGCGACGCCTTCCGCCCGCGCCGCGGCACCGTCGGCGCCGGACAGCCGACAGACCGGCATCGGACCGCGCGTTAAACCCATCCGGCCTGCCGTGCATCACATCTGCAGACCCTTCATGAACGGATATCGCCCATGAGCCCTCCGCACACCACCGCCCCGTCCCGCCGCCGCTCCGTCGGCGCCCTCCCCCTGGCGCTGGCGCTGGCCCTGATGCCGCTGGCGGCCGCCGCCCAGCAGAGCA # Right flank : CGGCCTGGTCGATGCCGATGTCGGCGGCGGCATCGAGACGGTGACCGGCGACCTGACCGTCGGCGCCGGTTCGCACGTGCGCGGCGGCATCCACTACGAAAAGCCGAGCCCGAGCCTGATCCGGATCAACACCAAGCGGCGTCCGCCGCGGGTGATCATCGGCCCGAACGCGGTGGTCGAGGGCGCGCTGCGCTTCGAGCGCGAGGTCACCCTCTACGTCCACACCAGCGCCCGCACCGGCCCGATCAGCGGTGCCACCGCGGTTCGCTACGACACCGATCGCGCGCCGGCCGAGTAGGCGCCGCGGTACGGCATGACCGGCGGCCCGGGCACGTCCGGGGCCGCCGTCGTATGATCGATCCTTCGTCCTGCATTCGCATCACGGAGGCTCCATGTCCCGCACCCCCGCCCGAACCCCGCTCTCCGCGGCCACCTCGCTGGTCGCGGCCGCGCTGGTCCTGTCGGCCTGCAGTCAACCGGCACCGGAGGCGGCGACCGAC # Questionable array : NO Score: 2.55 # Score Detail : 1:0, 2:0, 3:0, 4:0.60, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGGAGACCGTCAACGGCAGCATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.30,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [20.0-28.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 12227-13756 **** Predicted by CRISPRDetect 2.4 *** >NZ_VICD02000316.1 Lysobacter maris strain KCTC 42381 713, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 12227 28 100.0 32 ............................ CCCCACTGTGGCGACATTGGCAGCCCCCGTGT 12287 28 100.0 32 ............................ AATTCACGATGTGCAAAAACAAAATGATCGAA 12347 28 100.0 32 ............................ GTCGACGAACGTCTGCGCGTTCGCGAAGTAGC 12407 28 100.0 32 ............................ CATGATCTGGAACAGGCCCCAGCTGCAGGACT 12467 28 100.0 32 ............................ ATCACGATGAACAGCTGCTGGCGGAAGCCAGC 12527 28 100.0 32 ............................ TCCGGCAGCCAGCAACGGCTGGTGACAGCCCA 12587 28 100.0 33 ............................ TGCCGGCGCATCGCGAAGGGCATCCGCCGGTTC 12648 28 100.0 32 ............................ ACGACCCAGCCGCCGTCGCCGTCGCCACGTAG 12708 28 100.0 32 ............................ AGGCCGCAACGATCGCCGAAGCCCTGTCGCTG 12768 28 100.0 32 ............................ GGCCGACGGTGATGCACCACGCGCCAACGACG 12828 28 100.0 32 ............................ AATTCCTGGCCGCGTGTGAGAAAACGCACGGC 12888 28 100.0 32 ............................ AGAATGAACAGGACAACCGGCGCCAGCGCGGC 12948 28 100.0 32 ............................ ATTGCGGATCGGAATCGTTCGATCAGGTCGGG 13008 28 100.0 32 ............................ TGGGCGCGCTACCACCTTAACGGCATGAACGC 13068 28 100.0 32 ............................ TTCTCGCGCGCTTTCCGCTGAGCCTCGGTCTC 13128 28 100.0 32 ............................ AGGAGCCCGCGACTCGCCATGTCCGGCCAGCC 13188 28 100.0 32 ............................ GTGGGCAAGGCGCTGCAGGCCGCCTCCGCGGA 13248 28 100.0 32 ............................ GACCCGTTCCACGGGGTCGGGATGTGGACGAC 13308 28 100.0 32 ............................ ATTGCTGCATGCTGACGGTGTAACGGCGCACC 13368 28 100.0 33 ............................ CCGAACGGCAACCTGATCTACGTCGCGAAGGAC 13429 28 100.0 32 ............................ AGTGGTGGCAATACTGGTAGACAGGCGCCGAC 13489 28 100.0 32 ............................ TGCTCGTCGTGGGTCAGGGGGCCGCGGGCCAA 13549 28 100.0 32 ............................ ACCTTGACCCGGTTCAACTTGAACCGCTGCGC 13609 28 100.0 32 ............................ TGGATCTCGACCGCGTCACGGCGCTCCTGCTG 13669 28 100.0 32 ............................ GACGCCCACGGCGATGAGGTTGATCGCTACCA 13729 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 26 28 100.0 32 GTTCACTGCCGCACAGGCAGCTCAGAAA # Left flank : GCTACAGGCTCTGGATGCCACGCATTGGCTCAAGGGGATGCTCGATCATCTCAAGGTGTCAGCGATTGGCCCCGCGCCTGCAGATACCCGTCACCGGCAGGTATGCAGGGTGCAGGCCAAGAGCAGCCCCGCCCGACTTCGCCGTCGCGCCATGCGCAGACATGGCCTGGATGGAGAGGCGGCAACGCGACTGATCCCCGATGCGGCTGCCGAGCATCTGCGACTGCCTTTCGTCGTGCTTGGGAGCCGTAGTACAGGCCAGCCCTCCTTTCCATTGTTCATTCGTCACGGACCACTGCTGGCAGCCGCCGTTCCCGGACCGTTCAGCAGCTACGGCCTCAGCCGTGGAGCCACTGTTCCCTGGTTCTAACCCTCTTTTTGTGGGGGTGATGTACCTCCAATAAAATCAATGCCTTGGCGGCTGGCTCCCAAAAAGGGGGCCGGCCGCCGTTTCGTTTGTTGAGCTAGCATGGACAGGGGCTTGCAAGCCTTTTGCTCTA # Right flank : GACGCCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [43.3-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 5273-3682 **** Predicted by CRISPRDetect 2.4 *** >NZ_VICD02000335.1 Lysobacter maris strain KCTC 42381 761, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 5272 28 100.0 32 ............................ GACGCCCACGGCGATGAGGTTGATCGCTACCA 5212 28 100.0 32 ............................ AGATGGAATGCGAACGCATCAAAAAGTCATGC 5152 28 100.0 32 ............................ GATGACACCAGCGGGAGTTCGGTCAATCTCAA 5092 28 100.0 32 ............................ GCACCGCGAATGGCACGCCGATCACCAAGACG 5032 28 100.0 32 ............................ AGGCGCACGGAGCCATGGTCTCGAAGCTCGAA 4972 28 100.0 32 ............................ ACTCGCATTGGGTCACCGCGAGCTGGCGCTGG 4912 28 100.0 33 ............................ TTCACCAACTACATCGTCGCCCACGGCGGCGAA 4851 28 100.0 32 ............................ TCAAGCTCGCCTCAGTCACCCGCCTGGACAAC 4791 28 100.0 32 ............................ ATGACCCAACTCACCATCGAAGCCGGCACCGC 4731 28 100.0 32 ............................ TGCTCGTGGACATCGAGCAGGCGGTGCGCCGC 4671 28 100.0 32 ............................ ATGAGGGCACCCATCGTCTGCAACCTGGATAG 4611 28 100.0 32 ............................ ACCTGCTTGATCTGCTGGAGAAGCGGGATCAT 4551 28 100.0 32 ............................ ACTCGTAGGTCACGTCGAGCACCTCGTCAGGC 4491 28 100.0 32 ............................ GCCGAGACCATCGGCGATGTGCAGCCCGGTGA 4431 28 100.0 32 ............................ TCCGCAGCGCGCTCGTAGCCGCGACGATCCTG 4371 28 100.0 32 ............................ AGTACGTATGTGGCTCCGTCCCATATCTCCAA 4311 28 100.0 32 ............................ AGGGTGCGCGCTGCCGGCATCTTGCTCAGCTC 4251 28 100.0 32 ............................ ACGGTCTTGACTGGGTCGGCTTCGTCCGGAGC 4191 28 100.0 32 ............................ GTCGACGAACGTCTGCGCGTTCGCGAAGTAGC 4131 28 100.0 32 ............................ GCCGAGTCGCTCCGCCAGATGGCCCGCGAGTG 4071 28 100.0 33 ............................ TCTCGAAATGGACTTGCATCGTGCCGCCTAGGA 4010 28 100.0 32 ............................ ATGGACACGACGATGATCGAGGCGCGATTGAA 3950 28 96.4 32 ............G............... ATATCGGAGGCTCCGGGGGGCAGCGGTGGTCA 3890 28 100.0 32 ............................ GGCTCGAGGCGGAGCAAGCGGCCTACCGGCAC 3830 28 100.0 33 ............................ GAAGCCATCGCGCGGGCCAAGTCGATCCTTGCC 3769 28 100.0 32 ............................ TGGAAATCGGGGAACTTCGCCCGCGCGTCCAG 3709 28 96.4 0 ...........................C | ========== ====== ====== ====== ============================ ================================= ================== 27 28 99.7 32 GTTCACTGCCGCACAGGCAGCTCAGAAA # Left flank : GCTACC # Right flank : GTCATCAACGAGGAAATCGGCCGCTACCAGGGAGTCACTGCCGCACAGGCATAATGGGAAGGACAACTACGGAAGTCCTTCTCAGAGGCATATATCCGTTCGCTGGTGTTGCTATGGACAAGGCCATGGCCGCGGCGGACACTGCCGGACGACATCGGCGTCGCGTGTCCGCACCCGCGGTGGCGCCGAGCGGCTTCCGGAGGCGGCATATGTTCATCCTCACCTATTCGCTGGTCTTCGCCGCGATCGCGCTGGCCCTGGCGCTGATCGCGACCGGTTTCGACCGTCGGATCGGGGTGGCCGGCGCGGCGCTGTTCGCGCTGTACCTGGGCCTGGACGACTTCGATACCGCATTGCCGACCGCGCTGGCCTCGGCGGACCTGCTCGGCGGCGGCTGGAACTGGAGCGGCAAGCTCTACAGCCTGCTGCTGGCGGCGCTGGTGATCTATGTGTTCCGGCTCGGCCCCGAGGCGGTCGGACTGACCCTGAAGCAACGCAAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //