Array 1 33020-31841 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP039523.1 Corynebacterium diphtheriae strain CN2000 chromosome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
     33019	    28	  75.0	    25	TCA..CA............A.....C..	GGCGGTCCAGTTCTCAAAGTCCCTG        	T [32994] Deletion [32967]
     32965	    28	  85.7	    33	..........C...GAC...........	CAATACATGAGGATTGACAGTGCTGATTATGAC	
     32904	    28	  96.4	    33	..........C.................	ACGCACCATGCGGTATAATCAAATCAACCCCAC	
     32843	    28	  96.4	    33	..........C.................	TGACCTGCGCGGCGGTCGCATACCCTACCGGCG	
     32782	    28	  96.4	    33	..........C.................	TTTCATCGCGTGGCCTCCATGTCCTCGAGTTCG	
     32721	    28	  96.4	    33	..........C.................	GTAAAGAAATAGCCCCCCTTAATGCTCTCGTAG	
     32660	    28	  92.9	    33	.....C....C.................	TGTGCACAATGTTGTATCGTCGAATGCCAGAAC	
     32599	    28	  96.4	    33	..........C.................	TGTGCACAATGTTGTATCGTCGAATGCCAGAAC	
     32538	    28	  96.4	    33	..........C.................	ACTGCACTAACTGGGGCTGGTTTTATACCAGAG	
     32477	    28	  96.4	    33	..........C.................	GAGTATTTGGGCGGCGAATTGGTCGGCTCGACG	
     32416	    28	  96.4	    33	..........C.................	TCATAGCCCAGTCGCGGAGATCGGCTTTAGCGG	
     32355	    28	 100.0	    33	............................	TCGCGGCCAGTATCTTTGTCGATGATGCCGGGG	
     32294	    28	 100.0	    33	............................	TCGTGGAAGGTCGCCGAATCGATCCCAGCGAAA	
     32233	    28	 100.0	    32	............................	GCACGGAAAAATGCTCGACCGCACCCAATTTA 	
     32173	    28	 100.0	    33	............................	AGCCGCCGAGGTCGTATGGGGAAAGGACTCCGG	
     32112	    28	 100.0	    33	............................	GCGATCCAGGTATATTTTTGTTGGAATTTGGCA	
     32051	    28	 100.0	    33	............................	ACGCGGGCGGCACCGCCGCTCAGCTTCAATCGC	
     31990	    28	 100.0	    33	............................	CTGCGATTTCAGCGCCGCAACCTCAGATTTCAG	
     31929	    28	 100.0	    33	............................	GCGTCTTTGAGGTGCTTACGGATGACCGGGGCG	
     31868	    28	 100.0	     0	............................	|                                	
==========	======	======	======	============================	=================================	==================
        20	    28	  96.2	    33	GGCTCATCCCTGCTAGTGCGGGGAAAAC	                                 	       

# Left flank :   TACATCAAAAAGCTCGAAGCGATCAGCGTAACGATCCAAATAGTCTAGGACGACCTGATCTTTCCCTTTTCGAGCAAGACGACGTCTCATCTTGTTGAACCATTCAAGAAAATCAAAAGGTTCCACGTCCATGTCGATATCCATGGAATGGGCACGCCAGAAAATAGCCAGCAAAAGCCGCATCACAGCATAGTCTTGAGCCGGGGACTCCCCCTGAATATAGGCAACCTGCACCTCCCCCGCGAAAATATCTCGTATTCCAACTGAAATCTGGTTACCTTGAGTATCAAGAGCCAGAATCCAGCGGATCTCCAGTAACGAAGCCATCACCAACTCCTTCCTGATTGTTTTAAAACTCCCAACTTAGGAAGCACTTTTCCACAGAATACACTCTATAGATATTAAAAGTTAGTTTTTTCAAAATTTTTTAGTAGAGCCATCATTTACTGATTTCTCTGAATGAAAAACACAGATTCCAAAACCCGTTCTTCAACAAAGAT
# Right flank :  ACTTATCAAGCTGCACGTTTAGAGCCAGTTAGAGCTTATTACATATAACTTTGTTTCAGCAATTTTTCTGCTTCATCTTTATTTCTACTCTTTTAGGATCAGCCATTCACCCAAATTTGCTTAGTCCTTTCTTCTAGCCATAGGCTGGCATTGTTCCCTGCGATCAGGGATGAGCCTTTTTAATATCTCTACAAGATTTACATAGGCATACTTCCCCGCACCAGCGGGGTTTCCTTTTATGCGTCTTCCTTTGGGCAGACTTCCACCTCTAATCCACGTTCATTGGTATAACGCACTAGGAATCGACCTACACGAGCCTCTCCTCTTTCGTCGAAAAGCAACGCAACTTGGCCTTTAATCAAACCGGATCGTTGCCATTCTGGTGGTGTTTGTGCTTCGAGCGAATCAATAACGGCATTAAAATCCGAATCTCTACGTGTCATTCGGGTTGGCAGGCGCACTGTGTTTCCAGCCAATGCCTCAGTTTCTTTCCAAGTAAG

# Questionable array : NO	 Score: 5.74
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.81, 5:0, 6:0.25, 7:-0.01, 8:1, 9:0.69,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GGCTCATCCCTGCTAGTGCGGGGAAAAC
# Alternate repeat :   GGCTCATCCCCGCTAGTGCGGGGAAAAC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-6.50,-10.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-15] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.41,0.74   Confidence: LOW] 

# Array family : NA
//