Array 1 26162-28205 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMXX01000008.1 Shewanella chilikensis strain KCTC 22540 sequence008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 26162 29 100.0 32 ............................. CGCTCCAGTGCTAGAATTAAACCAGTAAATAT 26223 29 100.0 32 ............................. CCCGCTTGTGTGGCCTGTACTGGTTCCCAGCC 26284 29 100.0 32 ............................. GAGGCCAATTATGGCTGATATTTTTGCTGCTG 26345 29 100.0 32 ............................. CCGATACGGCCGCGGATAAACACCACGCGATC 26406 29 100.0 32 ............................. GAGAAACAAATGTCCATTTCAATATTGCAGGT 26467 29 100.0 32 ............................. CGAGAGAGTCTGCTGCGGTTTGGTGAAATCAG 26528 29 100.0 32 ............................. TTCGCGGGCTTTTTTGTGCCGCCTAAAATAAA 26589 29 100.0 32 ............................. GCGACAATTCGAGGCAGAGCGCAACGCTTTGA 26650 29 100.0 32 ............................. CACCAGGCCATTGATGACGGCGCCCAGATAGA 26711 29 100.0 32 ............................. GCTCGTGACCTGGTCTCTATCAGCTACATAGT 26772 29 100.0 32 ............................. CCATGGTCGATGAGTTTGGCGACCAAGTGCAG 26833 29 100.0 32 ............................. GCCATGGTTCAGGTCGAAATTGACCGTGTTGC 26894 29 100.0 33 ............................. GCTGAAAACGTAGCTCACCGCAAGGCTGTAAAC 26956 29 100.0 33 ............................. TTCGGTGTGTTGTTTCAGCCCGTACCTATCCGC 27018 29 100.0 32 ............................. GCTCCAGGCTATGGCCGTTTTCAGCTTGAATT 27079 29 100.0 32 ............................. GTCTTCTGCTGTCGGCTTATCAGGCAGACGGA 27140 29 100.0 32 ............................. TATTGCATAGGCAACCCAGTGATTAAGTGGAT 27201 29 100.0 32 ............................. GTGACATCATGGCGGAGCATCGCCGCAACGTG 27262 29 100.0 32 ............................. GGTGCCGGCAAGATGTTCCGGCCGCTTGATAT 27323 29 100.0 32 ............................. GCTTTATCGAACATACCTGCCCCTTATTTTTT 27384 29 100.0 32 ............................. CTGCTGCTATCGAATCAGGTTACGATGCGGGT 27445 29 100.0 32 ............................. CGCAAACAAAGTTGCAACAATGCCAGCTGCAT 27506 29 100.0 32 ............................. CTGAAACAGGATGTAGTAAATCCATATCAACA 27567 29 100.0 32 ............................. GATGTATTTATACAGCAATAGCCGTTGTTAGA 27628 29 100.0 32 ............................. CCGAATTGCTGGCAGTCGCCGCGGCTGAGACC 27689 29 96.6 32 ............................C TTTAGATCTTTTATCTAAATCTAGATGTCCTA 27750 29 100.0 32 ............................. CCTGTTTATTTTTCGGAACATCGAATGAAGAT 27811 29 100.0 32 ............................. CCTCGCGTCATACGCCAATGTGGACGTGACGA 27872 29 100.0 32 ............................. CGTAATTGGGGGTGATAAGTGGCCGGATTAAT 27933 29 100.0 32 ............................. TACCACGAAGATGGCCGCTTCAACGAGCTACC 27994 29 96.6 32 ............................T CCGGGAATAGCGCCCTGCTTGGCATAGGTTGA 28055 29 100.0 32 ............................. ATGCTTGACGATCTTCTGACGCCGTTCGGAGA 28116 29 100.0 32 ............................. TAACGGGTTCATTACAGTTGCTAGCTATAGTC 28177 29 89.7 0 ............T.............GT. | ========== ====== ====== ====== ============================= ================================= ================== 34 29 99.5 32 GAGTTCCCCGCACCCACGGGGATAAACCG # Left flank : GGTACTGGCAGCCGGTGAAATTGAGCCGCCTCCAACTCCAAAGGATGCCCAGCCCATTGCTATACCAGAGCCGAAACCGTTGGGAGAACAAGGACACAGGAGCCAGTAACTATGAGTCTGTTGGTTGTGGTGACCGAAAATGTACCGCCTCGCTTACGTGGTCGTTTGGCCATCTGGTTACTGGAGGTGCGTGCCGGGGTTTATGTGGGTGACACCTCCCGCAAGGTGAGGGAAATGATTTGGTATCAAATCAGTGAATTGGCAGAGGAAGGCAATGTGGTGATGGCCTGGGCCACCAATACAGAATCAGGATTTGAATTTCAAACCTTGGGTGAGAATCGTCGTATGCCGGTGGATTTGGATGGTCTGCGACTGGTCTCATTTTATCCAACTGAAAAATAACAAAATATTGCTCTTTAACAACTTGGAATAATAGCCTAAAAAGTTGGTGAATATTTTTAAGTGAAAAATCGCTTAAAAAACAATAGTATTTACCAAGA # Right flank : GTATTTCTTTACTGTACAACCCCAGCAAAATCCGAACGTCCTGCATTTGTGGGGCTGAAGAGGTCGAAACTGAGGTGATCTAAATAGCGGCCCGGCTCAAGGCAGCATATCTACTCGCAGTAGTCTGCTGGCGCTGCGGCCTTTGTCGTCGCTGACCGACAGTTGGAAGCGTCCGGCTCTGGGTGGGCGCCATTCCAGGGTTTGGCCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTGTCGGAGGCGGCGTCGGCCTTGAGGGCTATGTGTTCATTGGCCACGCTTTGGCGCAGGCTGTAGGTGACGCCTTTCAAGGGGGAGCGGATAAGCGGGGCCGAGTAGCTGACCGCGACTCTTTGGCTGCAGGCGGCCGGAAGCTCCGGCGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAAGTCTGACGGCCAGAAGGCAAACACCTCCTGGTGGTGAATTGCCGAGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCACCCACGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTACCTACGGGGATAAACCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.10,-10.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //