Array 1 17496-14262 **** Predicted by CRISPRDetect 2.4 *** >NZ_JSWF01000033.1 Lacinutrix jangbogonensis strain PAMC 27137 ctg7180000000651, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 17495 46 100.0 30 .............................................. TCTCAAGATTACGATTATTATACAGATTTG 17419 46 100.0 30 .............................................. TATACGACCTTAATTAAACTTATCAAAACT 17343 46 100.0 30 .............................................. AAATTTCACATTCAAAGGGTTAAGAACTAT 17267 46 100.0 30 .............................................. TACAACCTCATAAGTGACATTATCGCCATC 17191 46 100.0 30 .............................................. ATTAAAAGGCTTATTATAAACATACCTCCA 17115 46 100.0 30 .............................................. AACGGACTAAATACAACTTCACCCTCGTTT 17039 46 100.0 30 .............................................. TGAATATATCTGTAGCACTTACGTAGTTTA 16963 46 100.0 30 .............................................. TATCACTTTTTAATTGTGTTGATCCTATGT 16887 46 100.0 30 .............................................. TAAAATCTCTTGCTTTATAATGTAAAGTTG 16811 46 100.0 30 .............................................. GTCTTATCCATTTTTAGATGGTGCGGATTA 16735 46 100.0 30 .............................................. ACAAGCAAGGCATCATGTGAGCAATTACAT 16659 46 100.0 30 .............................................. AGATGTGTTTGAAGTTATGGAGCAAGGTTG 16583 46 100.0 30 .............................................. CAATAGATGCTAATACCACAGGTTTAGAAC 16507 46 100.0 30 .............................................. TGCATCAGTATATAAAATTGGAAAGATTTA 16431 46 100.0 30 .............................................. GGTTTATCCTTTAGAAAATCCAGAGGAATA 16355 46 100.0 29 .............................................. AAAGCACTTTCCAAACTTGGGTTTAACGC 16280 46 100.0 28 .............................................. AGTTTCATTTTTTATACTGCTAAATATG 16206 46 100.0 30 .............................................. TGTTCTGCTATGTAAAAAAGCGGTGCTAAT 16130 46 100.0 30 .............................................. TCTATCGTGTTCAGTAATTTTACTCATACT 16054 46 100.0 29 .............................................. ATGAAGAATGCTGTTAAACGTTTAAAAGA 15979 46 100.0 30 .............................................. AAAAATGAGTTATAAACTGCTATACGTGTA 15903 46 97.8 30 ...............................T.............. TCGGTCATAGTTTTGGTTTTGAAGTTAATG 15827 46 100.0 30 .............................................. ATCCATTATGAGTGTAAGGAGAGCGATGTT 15751 46 100.0 30 .............................................. AGACAGGTCTATGCATTGCGCCATAGGATT 15675 46 100.0 30 .............................................. AATTACACTTCTTAAAAGACAGTTTAAACA 15599 46 100.0 30 .............................................. AGGCATACCATTTTGGAACTTGTAGATTGT 15523 46 100.0 30 .............................................. TTTTTTATCTTTACTAATTAAGTAAGGCAT 15447 46 100.0 30 .............................................. TAAATCAGTCAGTTAATTCACGAATAAATA 15371 46 100.0 30 .............................................. TTATAGTGGTGTGATGGTACAAGCTTGTTT 15295 46 100.0 30 .............................................. ATCCAGAACTTTGTAAAGTTTGTCGATATG 15219 46 100.0 30 .............................................. CATAACCAATTTAACCAATTTGGGAACTTA 15143 46 100.0 30 .............................................. ACAAAACCAACAACCATTAAAGGAGCAATT 15067 46 100.0 30 .............................................. GAAACGAACAATTAAAGTAATGGTTAAAGT 14991 46 100.0 30 .............................................. AAGATTACGCTAGAGATAAATCCATACTAA 14915 46 100.0 30 .............................................. GCAAGATTTCGAAATGATGATTTGAAGGCC 14839 46 100.0 30 .............................................. AAGCAAGCAATGCCAAACTTTGCAAGATGT 14763 46 100.0 30 .............................................. CTAAACTAGACATACAAGCGAATGAAGATA 14687 46 100.0 30 .............................................. TTAGACATTTTAAAAGAAAATGAAGGAATT 14611 46 100.0 30 .............................................. TTCGTTTCGTTGTTTACTTGCACCACTCAG 14535 46 100.0 30 .............................................. TTTAACTCTTTTAAATACTTTGCTACTGTC 14459 46 100.0 30 .............................................. AAAACTAAATCAAACCATTGATGTTAATGT 14383 46 100.0 30 .............................................. TTTTACTCGGTGTTTATTATAGGTAAGGGG 14307 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 43 46 99.9 30 GTTGTGAATTGATTTCAAATTGTATTTTTACGTGAGCAATCACAAG # Left flank : CACAAAGTGTAGGACAACCTGCACTTATTTCATTATCAAAAACTATAGAAGCCAATAAAAAAGCGTATTACAATGCTTTAGAAAACAATAATAAACACGCAGATATTACAGATTGGATACTCTATTTCGGGCAAACCATATTAGATGCCCAAGAAGACACATTAAAGCTTATTGATTTTGTAATTGAGAAAGCCAAATTTTTCGATCGCTTTACTCAAGTTATGAATGAACGCCAACTAAAAGTTGTTACACGTTTTTTTAATGCAGGACACCAAGGTTTTGATGGTGGTTTAAGTGCCGAAAATTACACACGTATTGCAAAAACTTCTGCTTCTACGGCCACTCGTGATTTAAAAGATATGGTAGATAAGAAAATGGTAATTAAAACTGGTGAACTGAAAGGAACTCGATATTGGTTGAATTTGAAAAGTTAAAATAATGTCTAAATTCTTGATCTTTTAAAACTCAACAAGCCAGAAATCATTATAGAAATGCAATCT # Right flank : GTCAATCCCAGTTTATTGAGTAAAATCAATAGGTTGGGATTCCTTTTTAAGATTCAAAAAATTTACTTTTAGGAGAGGATAAATAGAAGTTTATTAGATTTTACCTATCCTATTTAAAACAATTGCAACTGTTGTGTTGGTTGTGGTAAATCCACTTCTCTAATACCATGAAATAATTCCATGTTACCAAATTGCTTGTCAGTAATTTCTAAAATACAGATTTTTCCATGTTTTGGTAAACTAAATTTTACTCTTTTAGCATGCACTTTTGCGTTTTCTCTACTTGGGCAATGCCTAAGATATATTGAAAATTGAAACATGGCAAAACCATCATCAATTAGTTTTTTACGAAACAAGCCAGCGGCTTTTCGTTCCTTTTTAGTTTCGGTTGGCAAATCAAAAAAAACGAATACCCACATAATTCTATAAGCGCTATATCTGTTAGTTGACATTTAATCTAATTCTGGATATTTTATGTGTCTTAGCTCTCCAGTAAAGCA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGATTTCAAATTGTATTTTTACGTGAGCAATCACAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.90,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //