Array 1 189042-192193 **** Predicted by CRISPRDetect 2.4 *** >NZ_UCPG02000040.1 Acinetobacter baumannii strain D48, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 189042 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 189102 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 189162 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 189222 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 189282 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 189342 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 189402 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 189462 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 189522 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 189582 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 189642 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 189702 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 189762 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 189822 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 189882 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 189942 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 190002 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 190062 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 190122 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 190182 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 190242 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 190302 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 190362 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 190422 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 190482 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 190542 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 190602 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 190662 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 190722 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 190782 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 190842 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 190902 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 190962 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 191022 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 191082 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 191142 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 191203 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 191263 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 191323 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 191383 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 191443 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 191503 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 191563 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 191623 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 191684 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 191744 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 191804 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 191864 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 191924 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 191984 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 192044 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 192104 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 192164 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 53 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //