Array 1 988018-992726 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP082871.1 Campylobacter hominis strain FDAARGOS_1467 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================== ================== 988018 30 100.0 36 .............................. TCGAAAGACAGAGAAACATAACATTCACGCATTTTT 988084 30 100.0 35 .............................. TAGATTTCATTTCCATTTTTGTCTTTAAGCCCGGT 988149 30 100.0 35 .............................. TTTATTATTGATAAAGGGAAAAATTTTCTATTTAA 988214 30 100.0 36 .............................. AGCTTTCCAAAATATCCTCGCAGCTTCTATAAAAGT 988280 30 100.0 36 .............................. TTAAACATTATTTTTTAACTGCGCTTATTTTATAAA 988346 30 100.0 36 .............................. CTTATAATTCTAAAGATGGTAAAGTTTATAAAAGCG 988412 30 100.0 36 .............................. CCCTTTAAAAGTTTTAAACCTTTTAATTCAAGCATT 988478 30 100.0 37 .............................. AAAGAAGTTGATGGAAAAATAATTGATACTTGCACGA 988545 30 100.0 36 .............................. ATAGCTTCAAAGGTGCTGAAATCGCCTTTTAAAGCT 988611 30 100.0 37 .............................. CTTCTAGTAGCCCAAATTTTTGTTTTTTCTATTTTTG 988678 30 100.0 36 .............................. TTTAGCCGCTAAATACGGCTTTGCGGTATTATTAAA 988744 30 100.0 37 .............................. GCTTTAAAAATCCGAAAGACTACGAAAAAGAAGCAAC 988811 30 100.0 35 .............................. TTCGCGCAATACGGACAGATCATAACTCTTTACTC 988876 30 100.0 37 .............................. CCAAATGTACCCTCGTTATCCACACCTATACACATTC 988943 30 100.0 34 .............................. TTCATGGCTTCCTGCCACTTCGGATTTGTTATCG 989007 30 100.0 37 .............................. GTTTCAACGCCACCTGAGATATAATTAACTAACTCGC 989074 30 100.0 35 .............................. ATATATTTTTTCATTAATTCCAAAATACCCATAAA 989139 30 100.0 38 .............................. AAGTGATGAAAAAAATGTTTATAAATTTACTTGTAAGC 989207 30 100.0 37 .............................. AAATGGCTGTTCCTGTTTGGGTTTATAGGAAAATAAA 989274 30 100.0 38 .............................. ATAAATTTAACATAACGATTAAAAACCATTTCTGTAGT 989342 30 100.0 34 .............................. TTTAAAATTTTAAAGGAATAAAAAATGGCGGCGG 989406 30 100.0 37 .............................. ATTAGTTTTTCTGCTCCTAGTATTTTTACTAGCACAT 989473 30 100.0 36 .............................. TCAAGCCCGAAAATTACGAAATCGTGGTAACCTTTA 989539 30 100.0 37 .............................. TTATCCAATTTTTCAACTGAAGTTTTAAAATTTAAAG 989606 30 100.0 34 .............................. ATTTCCAAAAACTTATTTTTTATATCTTCATATA 989670 30 100.0 35 .............................. CCAACTCTTCGATTTTTCCTAAAAGTTCCTTTGAA 989735 30 100.0 36 .............................. TAAGCGCGTCCATTTTTTTCTATCATGTCCGGCACA 989801 30 100.0 35 .............................. TTTTTCTAGTTCTTTCTTTATATTAGGACATTCAA 989866 30 100.0 35 .............................. TATACCCCGTTAAATATGCAGGATTAAGTCCCAAA 989931 30 100.0 36 .............................. TAGACAATGTGAGTTTTGAATTAATGGCGCTTAAAG 989997 30 100.0 35 .............................. TTATTTATACGGCAAGCCCTCAGACACAAAAATAG 990062 30 100.0 35 .............................. TTATTTATACGGCAAGCCCTCAGACACAAAAATAG 990127 30 100.0 33 .............................. GCAAATAATAGCAAATGCCGGAGATAAAGGAGC 990190 30 100.0 34 .............................. TCTTCATTCAATACATTATTTGTTATTTTTTCAG 990254 30 100.0 37 .............................. TTATATAAAATCGCTCTTTCTGCAAGGCTCATTTCGC 990321 30 100.0 35 .............................. AAAATTATAGTTTATAAAAAACTTAATTTTTTATT 990386 30 100.0 36 .............................. TCATAAAGTTTATTTAATTCCCAAGGCTCATTTTTT 990452 30 100.0 36 .............................. GTGGCTTTGGCGCCTTGATAAAATCATCATTTTTAT 990518 30 100.0 36 .............................. ACGAAAATAAGAAAGATAAAAAAATAGAAAAATTAT 990584 30 100.0 36 .............................. GTTTTTAAATTAGATACATAATTAAATAAATCATTA 990650 30 100.0 36 .............................. AAGTGTTTTCATCTTGCAAAGTGTCATAAACCAAGT 990716 30 100.0 36 .............................. TCAAGTTTGGCGCCGAAATATACATTAAAATAAATG 990782 30 100.0 36 .............................. AAAGAGCCGATATCTGCGAAGCAAAACTGGAAGAGC 990848 30 100.0 38 .............................. TAATGTTAAAACAACTCTTAATGAAGATAAAATTTATT 990916 30 100.0 36 .............................. CTACGAAACTTATTCCAAAGCCCTCATCTTTAAGTG 990982 30 100.0 35 .............................. TAAACGGAGTAACGTCCAATTTACCACCTATAGCA 991047 30 100.0 36 .............................. CTACGAAACTTATTCCAAAGCCCTCATCTTTAAGTG 991113 30 100.0 36 .............................. TTGTAACTGAGCACAAACTTCCCTTTTATGTTTTTT 991179 30 100.0 36 .............................. CCCGTAATTTTGTTAATTTCTCCCAAAAAAGCCCTG 991245 30 100.0 36 .............................. CCCGTAATTTTGTTAATTTCTCCCAAAAAAGCCCTG 991311 30 100.0 36 .............................. AACGGCGACACAATATCTTAATAACAGCTTTATCAA 991377 30 100.0 36 .............................. CTATACGCCCACAATCCACAAGTATAATATACAGTA 991443 30 100.0 35 .............................. TCTGTTATTCTTATAATTGCTTACCGTTTCGGTAT 991508 30 100.0 35 .............................. ACTTGCAAAAACTTTGGGACTTAATCCTGCATATT 991573 30 100.0 35 .............................. GCTAATGTATTAGCTGCAAATCTTCCACCACCTTT 991638 30 100.0 36 .............................. AACATATCCTGTAAATTAGTGTATTCAATACACCTT 991704 30 100.0 36 .............................. TTTATTCGCACGTTTAAATCGTCCCAAAGTTTTTTA 991770 30 100.0 36 .............................. CTTAATATTAAAGTATCTAAATCGTAAAATTTTGTT 991836 30 100.0 36 .............................. TCTTGTAATGAGTATGATTTTAGTCTTTCTTGTGAA 991902 30 100.0 36 .............................. TGTAATAGCGCATACTTTAACGATTATGCTACTATC 991968 30 100.0 36 .............................. ATGGTTTTATCAAGTTTATAAAATCCTAATTTTTCT 992034 30 100.0 36 .............................. CTTGCTCTTCCAAGCGCTATATTATCGCCACCGTTT 992100 30 100.0 36 .............................. TCTTTTTATGCATTTTTAAAATCTCAAGCGCGCTTT 992166 30 100.0 36 .............................. TCATTTACATTTATAAGGTCGTTTATTTCATTAAGG 992232 30 100.0 36 .............................. AGCTTTGCGACAAGATTTATCTCTTTTTGCTGCATA 992298 30 100.0 36 .............................. TAAAATAGCCCGCTCCTTTTTCCTTTTAATCCTTTG 992364 30 100.0 36 .............................. GCAAAGGTGCTGAAATATTGGAGAAATACACCGCAA 992430 30 100.0 34 .............................. TAGGGAGTTAAAAGTCCGTTTTTAAGTATATTTG 992494 30 96.7 36 .............................C AAGATATTAATGCAAGCGCGGTCGTGTGTTTTTTCT 992560 29 90.0 43 .................C.-.........C TGTATTAATTGTGTTTTCTTTACCAAGGCAGCATTTCTTGCAA 992632 30 100.0 36 .............................. AAAGGATTTTATCAGCTCTTTTAATATTCCTATTGT 992698 29 86.7 0 .......C.....-...........A...A | ========== ====== ====== ====== ============================== =========================================== ================== 72 30 99.6 36 ATTTTGCTATAACAAATTTTGTATTGAAAT # Left flank : CTTATGTTTTCTACGATATCGGCGACAAAGAAAGTGAAGTCGGAAAAAGGCGTGTGACAAAGGTTTTTAAGATATGCAAAAAATACTTTTTGCATCATCAGAAATCCGTTTTTAAAGGCGAAATAACACCTGCAAATTTTATAAAATTTGAAAGCGAAATCAAAAAAGTAACGGATAAAAACCTGGATACAATTACCATACTTAGGCTTTTTAGACAAACAGATGTAAAAGAGATAATAATCGGCGAAAATGATAGCGATAAAATATTTTTATAAGTTAAACCTGATTTTGTTTCAGTTTTTATTGTTTATTCACTTTTTTTGATTTTTCCAAATAAAATTTTGGTATAATTGCTCTGAAATATTTATTTTACGGATATTTTAAGCCGTTCTTTAACAACTCATTGTTAAATTAAAAACGGTTGGAAAATTTTCATAAAATGTAGGCTTCTATGAACTTTTCGCGGTTTAAAATAATTTTTAAACTGTTAAATGATATTT # Right flank : ACAATGCTTTTCCAGCTTTTTCGCGCCTTCCGTGTCGCTATCAACGTTTATGCTTTATTCTCATCCATTTTTTGTCCTTAAATAGAAAAATATGCTAAAATAATAAAAAGGAGAATGAAAATGATATATGTCCCACCGACAGGCGCGCTTATATTTGTTCTGTTTTTGTTATTTATGTTTTTATTTACAAAATACTTTATTTCGGCTACAAAGCACTTTATCAGGTTTGGAAATTTTATTACCGATAAATTTACAGCGCCTTTATTCAGCGCTATTTTTAAATTTCTTGGTAGAAAATTTTTAAATTTTTGCAAATACTTGAAATTTAACGTTTTTAAATAATCGATTATTCTCATTTTTTACCTTTTTAATAATCGCCCGCACTCATTTTTTCATCATCTATTTTCATATCGCAATAGTTGAAATCTCTATAATTTTCTTTTGTAATTTCATCGAAAAATGGCGGAAATTCCTTTATGAGCTTAAACTTAAAGCTGCTG # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTGCTATAACAAATTTTGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA //