Array 1 1343621-1342308 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI518737.1 Pseudomonas aeruginosa M8A.3 adger-supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1343620 29 100.0 32 ............................. GCCGATTCGAGAAGATCACCCACCGCATAAAC 1343559 29 100.0 32 ............................. AACGGACAAGACTTCTTTTTCGCCCGCTTCAG 1343498 29 100.0 32 ............................. CCGGCGGCAAAAAACTGCCAGGCAGGACTCCA 1343437 29 100.0 33 ............................. GTTTGCAGTGCCACTGCCGGGGCAGCGCCTCAG 1343375 29 100.0 32 ............................. GCATCTTCCGGCATGAGTACGAGTTCTGCATC 1343314 29 100.0 33 ............................. CAAGAGGAGCGCCAGCGCACCACGCGGGCAACC 1343252 29 100.0 32 ............................. TTCCTCACCTTCGCCCGCTTGATACAACTCCT 1343191 29 100.0 32 ............................. GTTGGCGTACGTGTCGCGGATCGCATCGAAGG 1343130 29 100.0 32 ............................. CTCTCCCACACCTCGGCATTGCCGAGCGCATC 1343069 29 100.0 32 ............................. GTGGCAGGATGAAGCCGGCGCCGGCCGACTCG 1343008 29 100.0 32 ............................. TCGGAATACTCCTGGGCGTCCTTACCAGGGAA 1342947 29 100.0 32 ............................. GAGGCGCTGAAGCACGTAATCCCGGATACCAA 1342886 29 100.0 32 ............................. CCGTATCTGAATATTTTTGCACGCATGCTCAT 1342825 29 100.0 33 ............................. TTCATCGGTGATACTGAAGCTAATGCTGCTGTG 1342763 29 100.0 32 ............................. CAGGCCTGAACCAGTCCGAGCTAGCCCGGCGC 1342702 29 100.0 32 ............................. TCCGCCGCGTGCTGCGCGATGACGGCACGCTG 1342641 29 100.0 32 ............................. CAAACTGCCCATGTGTGGCGGGGTCGGGTGAA 1342580 29 100.0 32 ............................. ATCGCGGAGAGAAGGGCCTGGTCGAGACGGTA 1342519 29 100.0 32 ............................. TCGCCGGTGCGGCCGTGGGGCTACGAGCGGCC 1342458 29 100.0 32 ............................. GTGATGGAGCGGACCGCCCCGAGCACCGCAGA 1342397 29 96.6 32 ........T.................... AAGGACCGCGTCCGCGTGCTGCTGGAGACGAT 1342336 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 22 29 99.8 32 GTGTTCCCCACATGCGTGGGGATGAACCG # Left flank : TGACCCGCATCATTCCCACCATCGAAGAGGTACTGGCCGCCGGCGGCGTCGAACCTCCCAGCGCACCGCCCGAGTCGGTGCCGTCAGCCATTCCCAACCCGGAGGGAATCGGCGACCTCGGGCACAGGACGCAAGGGTGAGCTTCCTGGCCGTAGTGGTGGAAAACGTCCCGCCGCGCTTGCGCGGACGTCTGGCAATCTGGCTGCTGGAAGTCCGCGCGGGCGTCTATATCGGCGATGTATCGCGGCGTACCCGGGAAATGATCTGGCAGCAGCTGAGCGAGGGCTACGAGGAGGGCAACGTGGTAATGGCCTGGGCCGCCGCCAACGAATCCGGCTACGAGTTCCAGACCCTGGGCGTTAACCGTCGACATCCAGTGTTGTTCGACGGGCTGCAATTGGTGGCATTCCAGCCTCTGGATCGGACCACGGAATAGAGGATGAGGCGGTAGATTTTTCGAAGTGTTTTTTCTTCTTTAAAAACAATGCTGTACGGTAAGT # Right flank : TGGAAGTACGCTCGCGCAGCGAGGATGCGATATATGCACGGGGCGAGCCGTTCACTTGAAAAGCCGACATTCCTGGCTGTCCTGTATTTCCCCTTTGGCATGGATAGAGCAGCCCCATAGGGCGAACGACGCCACCGGCGTCATTCGCCATGGCCGGGTCAACCGGAACGTCGAGCGGCTACCAGGCGCTGCTGCAGGCGCGTCAGGAAGGCCACTTCGAAGGCGGTCTTCTGCATCGGTGTGGGCAGGCTGTCGCGGCCGAAGGCGAAGGCGGTCCAGAGCTGGCCTTCGATCTGGTCGGCAAGCCAGTTCTCGGCCTGGCGGACGCCCTTGTCGATGGCGGGCTGGGCGGGAACCGGCCAGAGCAGGGAGAGACCGGGTTGCCGGTCGGCGGGGGGAATCTCGACCATCAGGTCCTTGTAGCGTTCGATGATTGCGTCGACGTGGGTCTTTTCCTTTTCATCCTTCGTCATGCTGGGTACTCCGTTTCTGAGAGTCAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACATGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACATGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1353617-1352793 **** Predicted by CRISPRDetect 2.4 *** >NZ_KI518737.1 Pseudomonas aeruginosa M8A.3 adger-supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1353616 29 100.0 32 ............................. GCCAGCGAAATGCCGGCTGACATTCTGAAGGC 1353555 29 100.0 32 ............................. CATCCGAGGGATTCACCAGCCAGGCCATCATC 1353494 29 100.0 32 ............................. GACCGCAGTTGATCGAGCCTCAGCGCTCGGCC 1353433 29 100.0 33 ............................. TCTTGGCGGGGCATTGTGCAGTGGATTGCCGAT 1353371 29 100.0 32 ............................. CAGACCAAGGCGCCGCCGCTGATCGTGCCAGC 1353310 29 100.0 32 ............................. GCGATCATCGAATGGCCGCACCGCATGGACCT 1353249 29 100.0 32 ............................. CTCAACGAGAAGAACATCCCGCGCAACATGAT 1353188 29 100.0 32 ............................. GCCATCAAGGAAGAGCCCCAGCTGCGCGTCGA 1353127 29 100.0 32 ............................. TAGTCCTGGCGGATATCGCTGCACCAGTGCAT 1353066 29 100.0 32 ............................. CCTGCATCAGATGCGGCCTCCTTCACGCGGGC 1353005 29 100.0 32 ............................. CTGCTCCAGGGCAGCAATTCCAACGGACTGGG G [1352994] 1352943 29 96.6 32 ..A.......................... ATGGAAGACCCAACCCGCGGCCAGGGGTGGGG 1352882 29 89.7 32 ..............C..........G.T. GTATCGACATCGATGGTGACCAGGCTGGTCCA 1352821 28 79.3 0 A..........A..C.....-..A....T | C [1352812] ========== ====== ====== ====== ============================= ================================= ================== 14 29 97.5 32 GTGTTCCCCACGGGTGTGGGGATGAACCG # Left flank : GGCATCGTTGTACAGGGCGACGAATTCCGCGCCCCAGAACAGCACGATCTGCGCCTTGGCCGGCAGCAGCGTGGCCATCGTCGTCTTCAGGCTCGCCGACCAGGCGTCCGGCGGGCCGAGGGGCGAACTGGCCGCGTCGAGGCTGAGCAACAGTTTCCCGACCGCTCCTCCGTTGGCCAGGAAGGCCGGTGGATGGTCGAGGGTGTTCGGGTCCGGTTCGATGGTGAAAGGCTGTGCCATGTCTACGGAGTCTTGCTCGGTTCCGGTTGAGGTGGTGGGTCGTATGGAACATAGGAGGGCGGTGGGTGCGCTTGCGTTCAATCAGCTTGGGGGACCGCGGGATCCCGATGCGGGTAGGTTTCGACTGGTCCCGAGGGAGCTGCCGGATTAGGCTGTGGGATGAGTACGGCCCTCATTTCCAGGAGCGGCGCGAGGGCCGCTTGGCCCGGTGGAATTTTGCTGTTGTTTTTCTTTTTTTAAAACAATGGGATACGGTAAGG # Right flank : GTCTACGCTCCTGCGGTTCGCCCCACCGCGCGGTATTTCCCACGGTGGGGCGAACCGCGCGGCACTACGACCAGTGGCGTGATCACCAGTGTCAGCCGCCAGTTGCGGAGACGCGGATCGCCCACCGTCCGGCAAGATCCTCTTTCAGGGCATGGAGTTTCCAACCAACCTGGTTCACGTCGCTGGGGATGCAGGCTTCGCTCAGCACGAATAACTGACGGCGCAGGCATTGGGCGGGGGCTGCCTGGATACCTTGCCCTTACCGGTCTCGAAGAAGGCTTCCAGCCCCCCTGTGGCGGAAGGAAATAGATTGTGAACAGGCGGCAAGTGAAGGTTGTTAGTGAGTTAGCGGAATGTCCGACGTTCGCTGTTGCACCATGGAGTTCCTGCTAATTTGGACAGGGTGGTCGGTCCGGTCCATATCCCTCCTGCGCTCCTTCGCTTGCTAAACGGGGGTGAACAGGCGCATCCCTCGCTGGCTGCTCCTTGACGAGCGTCAT # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGGGTGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [21-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //