Array 1 36143-33926 **** Predicted by CRISPRDetect 2.4 *** >NZ_LVYQ01000007.1 Streptococcus pyogenes strain 157 contig_15, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 36142 32 100.0 34 ................................ ATAGAGAAAGGGATCATAAAATAGAAATGTTATT 36076 32 100.0 34 ................................ CACTCGATACAAAATGCGCAGAGCTACTTGATAC 36010 32 100.0 35 ................................ GACAATTTATTGGAGAACAAGAAGGTATCAAGAAA 35943 32 100.0 35 ................................ AGGAGCATAAAGTAAATATCAGTAAACTCGATGGA 35876 32 100.0 34 ................................ ATTGATTTTGAATTACTTGTTGCAGACGGCTACT 35810 32 100.0 33 ................................ ACAAACATGCAGATGAAAGTATTACAAAAGCCA 35745 32 100.0 35 ................................ CTTAGAGTCAAGGTATTTATCTATAATGTCATCAT 35678 32 100.0 33 ................................ TTTGTGTTTAGGCTTTTTGTTTAGCCTAGACTT 35613 32 100.0 33 ................................ AGGCAAGACGCCCCTTATTAGAAAAAGCGGTCC 35548 32 100.0 34 ................................ CTCCTAAAATGGTAAATCTGGTTCTGGTCCATAG 35482 32 100.0 33 ................................ TACTTCATGGCGGACTCTCTCAGGGTCAGCAGC 35417 32 100.0 35 ................................ ACAGTTGGTGTGAATCTCCATTTCTATCGGTCATT 35350 32 100.0 35 ................................ AGTTATGATTTTTATCATCATGCTATGGTTTATTT 35283 32 100.0 35 ................................ ACTTTGAGCCCTTGAATAGGTTTCACGTATTCGGG 35216 32 100.0 33 ................................ GTGAACGTGGAGCAAAAGACGGGGATCTTGTTC 35151 32 100.0 33 ................................ GGGAAAAACGTGGGCAGTAGAGTTTTTGCGAAG 35086 32 100.0 36 ................................ TTTGATTTTACCGTTGAAGGCATCACTAAGAATAGC 35018 32 100.0 34 ................................ AAACATAGGCTAAGGCATCTGTCAATAGGGGCTT 34952 32 100.0 34 ................................ AGCTTTTATTATCAGAATTTGCTAAACGAAAAAC 34886 32 100.0 34 ................................ CTTTAAAGCAACTGCCTTGGTTGTTGTTGGTGAT 34820 32 100.0 34 ................................ AAGCTAAACCTATCCTAAAAATCAAAGGCACAGG 34754 32 100.0 33 ................................ AATGACTATTATGGGGATATCTGCCACGATATA 34689 32 100.0 34 ................................ ACCAATAATTCTAAAGTCGCTATCTCTATCTACG 34623 32 100.0 33 ................................ TTATAATACAACCAATAGACATAATCTAGAATC 34558 32 100.0 37 ................................ AAACTATGTGACTGACACTCTGGACTATGTCAAATAC 34489 32 100.0 34 ................................ TGCTGTAGGTAAAGCCGATAATAACTGGGGCGGA 34423 32 100.0 33 ................................ AAAAAAATAGCTAAGATCGCTACTGTGTCTGCT 34358 32 100.0 35 ................................ ATGTAATCCTGTTGTTAACTTGTCAAAGTCATAGA 34291 32 100.0 35 ................................ AAAAACAAATCGTTATCAATTTGCGTCTTTCCAGC 34224 32 100.0 34 ................................ GATTCCCCCACGAAGCAAACAAGAATTCACAGTC 34158 32 100.0 37 ................................ ACGTAAAATATTAATCAGTGTTGATTTACCAGTAACC 34089 32 93.8 34 .......TT....................... AAATTTGGCGAGGAGAGCGTGAGGCGAATCTAGT 34023 32 100.0 34 ................................ ATTAGCACTGGTTATATTAAGTGCCGAGGAAAAA 33957 32 96.9 0 ...............................G | ========== ====== ====== ====== ================================ ===================================== ================== 34 32 99.7 34 GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Left flank : AAGGCCATACGAGGAGATTTAGAAAGCTATCCACCTTTTATGGTTTAGGAGATGTTATATGATGGTTTTAGTCACTTATGATGTAAATACGGAAACACCTGCTGGTAGAAAAAGATTGCGTCATGTTGCCAAACTCTGTGTGAACTATGGACAACGTGTTCAAAATTCTGTTTTTGAATGTTCTGTGACACCCGCAGAATTTGTGGATATAAAGCACCGCTTAACACAAATCATTGATGAGAAAACTGATAGTATTCGCTTTTATTTATTGGGGAAAAATTGGCAGAGGCGTGTGGAAACACTTGGTCGCTCAGACAGCTATGACCCAGATAAAGGTGTCTTATTATTGTAAAAATCTCTTGTGCGAAGCTAGCTTTCACAGAAACACCTTGCTTGCTCGCGCAAAAATAACTTAAAAAAGAAGCGAAATGGAGATAAAAAGGCTTAAAACACCTCTATGTGTGCCATCCGTTTCTCTATAAACTGTGTCATTTGGCGCA # Right flank : ATGAACCCGACCTCTCTTTTAATGAGGTCGGGTTTTTACATGCCTTTAGTCAACCATTTATCTGATAGCGTATCAAATTCAAGTTTTTGCATGTTCTAGTCTATGGTTTGCGCCACTAGCTTTCGGTAAACTAAGAGTAACTTAAGAGAGGAGTTATTTATGACACTATCACTTGTATTAATGGTATCGGTTTTTGGGGCAGGCTTGTTATCATTTTTCTCTCCGTGTATCTTTCCGGTCCTTCCTGTCTATTTAGGCATTTTACTGGATGCAGATGATTCAAAGACGATTACTATATTTGGTAAAAAACTCTATTGGTATGGCATTGTCAAAACCTTAGCCTTTATTTTTGGTCTATCTACTATTTTTGTGATTTTAGGTTACGGGGCTGGTTTTTTAGGAAATATCTTTTATGCGGTATGGTTTCGGTACTTACTGGGAGCCTTGGTCATTATCTTGGGGATTCATCAGATGGGCCTCATTACCATTAAGAGCTTACA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //