Array 1 13393-11561 **** Predicted by CRISPRDetect 2.4 *** >NZ_QJOM01000023.1 Lactobacillus helveticus strain FAM23285 FAM23285_scf0023, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 13392 32 100.0 35 ................................ ATTGATAAAAGACTGATACATGTGGCGAGTAACCT 13325 32 100.0 35 ................................ AAAGACGTGTGAATGGTCAATGGATCTTGTACAAG 13258 32 100.0 34 ................................ GTATTCCAGCCAAAGCAGATGGCTTTGCCACCTA 13192 32 100.0 35 ................................ ACCGGTGAATCGTAAATGTTAATCGAGCCACCAGC 13125 32 100.0 34 ................................ ATATGAATTCCTTGGCTAGGGCTTTGAGCACTGA 13059 32 100.0 35 ................................ TTTCTACTGGTTTACCATCTGGGTTTCCTGATCTT 12992 32 100.0 35 ................................ TGCAGAAGGTTAACAAACTTAAGCCAGATTATCTT 12925 32 100.0 35 ................................ AGTGACGTGCCATCAGTTAACCAAAAATGTACCTA 12858 32 100.0 34 ................................ CATTGACTGTTAGTGTCAATGAGATGGATTTAAA 12792 32 100.0 35 ................................ AATTAAGTATAATCATAGGGGCAATAATTGCTTAT 12725 32 100.0 36 ................................ ATTCAAAGGAAGTGGTTTAAGAAGTGAAAATTGATC 12657 32 100.0 35 ................................ ATAGCGCTATTAACAAACAAGTTATGCAACCGCTT 12590 32 100.0 34 ................................ TTTTGACTTTTGCTTGTTACGACTAATCAGGAAA 12524 32 100.0 35 ................................ AATCTATGTAAATAAGAAGTGTCAGAAGTTAAGCC 12457 32 100.0 34 ................................ ATATGCGTCAGTTTCGCTTTCATGGTTAAAGCAT 12391 32 100.0 35 ................................ ACTAATGGAATATCCTTCATGCGCAAGCCTGTAAA 12324 32 100.0 34 ................................ TTTAGTGAACAAACTCCGTTGCGATACCGTCACT 12258 32 100.0 35 ................................ TAAAATACAGTTGACTTTTTAGAAGATTTAAGTAA 12191 32 100.0 35 ................................ TAATATCTGTGAAGCAAACAAGGATCACTTCCTTG 12124 32 100.0 34 ................................ TTAAACGCCTACAAAGAACGTCACAATGCAAACA 12058 32 100.0 34 ................................ CCATTAAATAATCATTACTTGTATTAAATAAAGT 11992 32 100.0 36 ................................ GTTTTCGGGTGTCGGGTTTAATGGAGTGGTATCGGC 11924 32 100.0 34 ................................ ATCAAAGCTATCCTGCTATTGCTGATGGCTGGTG 11858 32 100.0 34 ................................ AGTTTTTGAACGCAATTCATTACCCGGTTTTTTC 11792 32 100.0 34 ................................ ACTAATGAAGTAATCAGTAAGGTGTTGGGTTACA 11726 32 100.0 35 ................................ TACTTAGATGCTGAAATGAACTTAGACCCGTGGAT 11659 32 100.0 35 ................................ AAGGATATTGACGGTACTGTGTTTGAAGTTTTCGG 11592 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 28 32 100.0 35 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : GGAGATCTTGACGAATACCCACCGTTTATGTGGAAGTAGGTATGCAGCATGATGGTAGTAGTTAGTTACGATATTAATACGGAAAGTAAATCTGGTCAGCGAAGGTTACGTCATGTAGCCAAAATATGCTTAGATTATGGACAACGAGTTCAAAATTCCGTTTTTGAATGTAAAGTTAATTCGATGCAATTAGAGTTGATGAAAGAAAGACTACTAGACGAAATCGATGATAGCCAAGATAGTTTGTATTTTTTTAATTTAGGGAAGAATTATAAAAATAGAATTAAGTCATATGGAATTAAAGAGGTTATAAATTTAGAATCGCCTGTAATATTTTGATATCGGTGCGAACTGTATGTGAACATGCTTTTAGGGAAGATTCGCACCAATTTTAAACAGGTGAAAAGTGATCTTTTGATAAAAAATATATTTTTATCAGGGTAAGTTAATTTGAAGCCCAATATTTAGAAATGAATTGAAATCATGATCTAAATATTGCG # Right flank : TTTAGGTCCATTGCGCTCTTGCCAGTGAAGTCGTGTCGCACTCCTTGTGATGCACTTGTGGGTGTATTAGTCGGCTTCTTCAACCCAGGCTTGAAGTACTAATTATTAAGAGGAGATTATTCAGATGACAATCGAAGAGATGCAAAAAGGCTATCAAAATGAAGTTGCTTATCAAAAACATATGCTTCGCAATCTAGGCTATTGATTCCAACTCTTTTTAACAGTTAGTGCGATTGGTTTGGTTTTAATTTACTATTTCCATCAATCAACTATGTGGCTCTTTATAATCGGAATTATTCTGATGGTCGCCTGTGTTTTAGGAATGTTTGCTTTTGGCTATGCTTCTTGGCGCGGACGGCAGAATGTCACTCTGGTAATCGAAGACTATGAGAAAAAGATTGCAGAAATTAAAAAGTTAGATCAAAATGCTTCCGGAACGGAAAAGATCCGTTTCAAATGATTCTTATATGAATAAAACAATTTCCCCTTCTCTAGAAATT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //