Array 1 276823-277782 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_ALTD01000014.1 Streptococcus agalactiae GB00226 ctg7180000003905, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    276823	    36	 100.0	    30	....................................	ACGGGTCGTGACCGCTCTGTGTCGTATGAA	
    276889	    36	 100.0	    30	....................................	ATTGGTTATTTTACAAACGACCCGGATAAA	
    276955	    36	 100.0	    30	....................................	ACAAATCCAGCTTACTTTTAATCAAAAGCT	
    277021	    36	 100.0	    30	....................................	AAAACGTCGTAAACGTGTCATTGATTGTAT	
    277087	    36	 100.0	    30	....................................	TTTTGCTAAGTCTGCAACGCCTTTAATAAT	
    277153	    36	 100.0	    30	....................................	CTTTGTAAAAATTTCTTTAACTAATTCATG	
    277219	    36	 100.0	    30	....................................	TCTCGATGGAAGATTTCGAATTAAAAACCA	
    277285	    36	 100.0	    30	....................................	CATCTAAAGCTCAAGAAGTTAATACTATGT	
    277351	    36	 100.0	    30	....................................	TTTAACAAAATCATAACCTAAAGGGGTATT	
    277417	    36	 100.0	    30	....................................	TATTATCAGATACGCTAAAACCAGTAGTTC	
    277483	    36	 100.0	    30	....................................	TTCAAACGGAGTTGCTTTTAAAAATGGGGT	
    277549	    36	 100.0	    30	....................................	ATCCAAAAACTGGTGGACACGGGATCCTTT	
    277615	    36	 100.0	    30	....................................	CTACACGCAAGATTACATGGCTTCTCAGTT	
    277681	    36	 100.0	    30	....................................	TGGTTATACATTTACTAATCCATCAGCATT	
    277747	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        15	    36	 100.0	    30	GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	                              	       

# Left flank :   CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG
# Right flank :  CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:58.33%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.70,-0.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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