Array 1 564532-564861 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJHK010000001.1 Enterobacter hormaechei strain RHBSTW-00564 NODE_1_length_609489_cov_168.085, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 564532 28 100.0 33 ............................ CTCACAAACTATTGAGATGATTAACTGATGGAA 564593 28 100.0 33 ............................ TCTTTTATTTTCGAGCATAGTCACGGCACAAAC 564654 28 100.0 32 ............................ GGAACCGCAAACAGAGAAGCGCCACCGCCGAC 564714 28 100.0 32 ............................ AGTGGTCGATGATTCGTGCACGCCACTGCTCT 564774 28 100.0 32 ............................ CTGAGCTTTGAAGGCGAAGTGCGCAAGAAGGA 564834 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 6 28 100.0 33 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : CAGGAACCCGCACAGACGGCGAGTTCACCCGTAAGCTGCGCTTCGGCACCGGCGGCAAAGGCGGCGACCTCTTCATGGCGGGTGGGCATCCACTCAATGGTCTTCATCTTGTTAAGGCTATCGCTGAGTCCGTTCAGAGAGTCGCCAGTGACGCCCCAGATACGCTTTACGCCAGCCTGCTCAAGGGTTTTCGCTATGTATGCAGCCACGGTTTGTTTCATGGTTGTCCGTCTCCTTTTTGTGATATCGCTTACAAGCTTAGAAGAAAGTCGCTGTATTGCCTGCTCAGTACTCTTTAAGTACAGGTGGTTTTTCTGCGCGACGCGCCGCCAGCGGGCTGAGGTTGGGGCGGGCGGAAGCGGGTTTGCAGACCCTTTTTTCCTGATGATGCATAAGTTGTTGATTTTATATGGTTGGGCTGAAGGGGAATAAAAAAGGGTCTGGAGGAAGTTTTTGAGGTATTGGTTTATCAGACAAAGGGATAGGTGTAGATTGTTTCA # Right flank : ATCTTGCCTGATTTGCTCATGCCTTTAGTCACGGTTCACTGCCGTACAGGCCGTAGGCACAATGTAGGCCGGGTAAACGTAGTGCCACCCGGCAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGGGTTCCAAAGGCAAATGCGCTGGCCTGCACGGGCAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGGTTCCAAAGGCAAATGCGCTGGCCTGCACGGGCAAAAAGCCCGGTGGCGCTGACGCTTGCCGGGCCTACAGGGTTCCAAAGGCAAATGCGCTGGCCTGCACGGGCAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGAGTTCCAAAGGCAAATGCGCTGGCCTGCACAGACAAAAAAGCCCGGTGGCGTTGATGCTTACCGGGCCTACAGGTGAACCGCGAAAGATTATGCGAGCACAAGATCGCCTTGCGGATGGCACGAACATGCCAGCACATAGCCCTCTGCAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 580235-581042 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJHK010000001.1 Enterobacter hormaechei strain RHBSTW-00564 NODE_1_length_609489_cov_168.085, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 580235 28 100.0 32 ............................ TTCTGGCGTGTCCGGCGTAGGCCGTCCGGTCA 580295 28 100.0 32 ............................ ATAAAATGGTTATTGTAAACGCAAAAGTGTCA 580355 28 100.0 32 ............................ CGGCTGCAATTAAGGCTAACAGTTATCTTCAG 580415 28 100.0 32 ............................ AGGCTCATCAACTTTATTCGTTGCCTGGGTCA 580475 28 100.0 32 ............................ GGCTCGTCGCTGACTTCTTTGTCCCATACAGG 580535 28 100.0 32 ............................ GCTTGGCCTGACACATACTGTATTTAATCCTC 580595 28 100.0 32 ............................ CTGTGGTGTGCCTGGACGCTAATGGTCGCCTG 580655 28 100.0 32 ............................ AAGCACGATCTCAATAATGTTCTCTCAGTGAT 580715 28 100.0 32 ............................ TGGGCGTAAGCAACTGCTGAAATGAAATCGTT 580775 28 100.0 32 ............................ GTTGCGCACTGAGAGACTGGCTCCGTCCATGC 580835 28 100.0 32 ............................ GCGAACGCCTGCCTGATTGACAGGCCACCCTC 580895 28 100.0 32 ............................ AATGGCCTTATAGCGAGGACCATCAGCAGCCA 580955 28 100.0 32 ............................ TGGAAATTGACAGCCGGGAAATTGAGATCACA 581015 28 78.6 0 ...................T.A..CTCC | ========== ====== ====== ====== ============================ ================================ ================== 14 28 98.5 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGTTGCCTCGGTGCTTATCTGGAAGAAGTCAAAACCGAACTCGCAGAATCAATGAGCGATTTCCGGGTGGTTGAATTTGACGACGAGGCGGAACGGCCAAAGGAAAAAGAGTGGCTTCTGGAAAGTACTGAAACCAAATGCGATTACTGCCGGGCATTAAACCACGTGCTGCTGGTGTCGCATTTTGACCGCGAGATGCTGCCCCATCTGACAGGATTGCTGCATGACATTACACATTCGATGGCGACAGATGTGGCTGCACCTGAATATGGAAAGCCTGTAATCCATATCATTAATTAAGTTTAGTGTCGCGCGTCGGGGAAGGGACTCCGGCGCGGTATGTCGCAACCATTTTTTCGAGTGGTTCTTTAAGTTATTGATTTTTATTATGAGAATAAAGGCCGCAGAAAAAATGGTTTTAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGATTTCTTCCA # Right flank : CCTAAATATTCACTCCAGCTATTTTAAAACCCACAATCATCACCACAATCCTCGTTGTATTTTAAATAAACTCAATACTCATTCACCCCACAACCATATTCCCTCATATATATTATTCACAAAAATAATACATTAAATATGTCAGAGGTTTTTTATCTCGACATTCCGATAATTATTATTCATTTGATACGCGTCACATTTGTCTTCATCTTATCTCCGCTAACATACCCTGCATTCAACATATTGAAATAAAAAGCACTTGCTATGCCAGCGAACAGCATTACCTCGTCCGACTTAAAAACCATTCTTCATTCAAAACGTGCCAATATCTATTACCTGGAGAAATGTCGTATTCAGGTAAATGGTGGACGCGTTGAATATGTCACTCAGGAAGGTAAAGAGTCGTTTTACTGGAATATTCCCATCGCTAATACGACGGCAGTAATGTTGGGAATGGGAACATCCGTTACGCAAATGGCCATGCGGGAGTTCGCGCGAGC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 590888-592421 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJHK010000001.1 Enterobacter hormaechei strain RHBSTW-00564 NODE_1_length_609489_cov_168.085, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 590888 28 100.0 32 ............................ TTTACGTACTGCAATAAATTCGTCTTTTGTAA 590948 28 100.0 32 ............................ GATGACGGCACGACGGTCGCGATGTTTTTATA 591008 28 100.0 32 ............................ CATCTGAGTCAGTCGTGCGAGCTGACGTTCGC 591068 28 100.0 32 ............................ CGTATGGTGAACTCCGGTACCGAAGCGACCAT 591128 28 100.0 32 ............................ CCGTAACGGCGTGGCGCAGCCGCTGCGTCTGT 591188 28 100.0 32 ............................ ATGACAAAATTGAAGCTGTTTTGGAAAGGCTG 591248 28 100.0 32 ............................ ACGATTCCCGGTAGCCCTAAGCCCTGGAAATC 591308 28 100.0 32 ............................ GTGTACTTCGACGGATATACCCACTACAGCAC 591368 28 100.0 32 ............................ AGAAACGCTATTAAAGGGAAAAATATTCATAC 591428 28 100.0 32 ............................ GGCACGCTGTCGGCGGGCAGTTAGTTGAAGTC 591488 28 100.0 32 ............................ ATTTCAAACTTTTCCCGGCCAACATGTATAAC 591548 28 100.0 33 ............................ TGACGGGCAGAAGTACACCGATACGCCGATCCC 591609 28 100.0 33 ............................ ATACAGGGCTGCCGCTATAGTGCAAACCAATAT 591670 28 100.0 32 ............................ AATCAACGTGAACTTTCATGGCGCAGAACTGT 591730 28 100.0 33 ............................ TGGCAACTCGATAACGGTGGTTTTACCACGCGC 591791 28 100.0 33 ............................ GACGTGAAAAACATCCACGAAGCCCGGTCTTTT 591852 28 100.0 32 ............................ TTCATTGTGATCATGCCAATCGGTGTATGGTT 591912 28 96.4 32 .........G.................. TGCCTGACTTCCTTCGACTGGGTGAAACGTTC 591972 28 100.0 32 ............................ AGCATCATTCCGCGGCGTGCCGTTCAAAGTCT 592032 28 100.0 32 ............................ CGCGTGCTGGTGCAGAACGACAGCGATATCCA 592092 28 100.0 33 ............................ AGCCGCCTGTTTACCAGTGATGAAGATGCGTTC 592153 28 100.0 32 ............................ TCGTTGCGGGTTGATCAGCATGTCGTCGATTG 592213 28 100.0 32 ............................ TGTGAACTGAATGAGAACGCCGACGGCGTTAG 592273 28 92.9 32 C.....................C..... TTGTTGCTGATCACCCTCCCGTTGTCACCCGG 592333 28 89.3 32 ..A......T..........T....... CGTTGAGTTTCTCGAGCCACGGTTTTGACATT 592393 28 85.7 0 ..T.................T...T..C | T [592413] ========== ====== ====== ====== ============================ ================================= ================== 26 28 98.6 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGCGCCACACGTTCGCTCTCGTCGGGCGTCAGCGTCCGGCCCGTACTTTTGCGGCGGGCAACGTTACGCTCGTTAATTCCCGTGACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTGAGATATTCAATCAACCGCATGCCTCTGCTTGCAGGTAAACCGGCGTAGCGCCACAGCGTGTTATCAGCCGACCTTTGCGCAGGAACCCATGTTCTCATGATACCTCCTGAGTGATGTCATTTGTCATGAGTAAGTATAGCCATTTGTCAGAGAGTATGGAACGGGTGTTTTTTGTTCAGGGTGGGGTAAAAGAAGGATGATATTTGACCCTAATTTTTGCCCAGAATGTAATGTATTGATTTTTAGATTAAAAATCCTGGGGTGTAAAAAAAGGGTTTGAGCAGTGTTTTTAGCTTTTTTTGTATGAAAATCATGATGGTGGAGAGGTATTATTTCA # Right flank : CATCCAACGCAGCAGCATTTCCCACCGCATCCGTGCACCACCGCACAACCAACACAAAACCCGAAACCAAACCCGAAACCCAACCAATCGTTCAAATAATCGACTGTGCTAACAAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //