Array 1 31216-31508 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTWX01000029.1 Bacillus cereus strain AFS009035 AFS009035_110_C6_Contig29_140523, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 31216 30 100.0 37 .............................. TTTAAAGATTTTTGAACCTTTCCAGGAGTTAAACCCA 31283 30 100.0 35 .............................. ATTATGAATGGATACATACAGCACGAGCTTCCTTC 31348 30 100.0 36 .............................. TTATCAGCAACCATTAAATAAAGGGCGATTGCTGAA 31414 30 100.0 35 .............................. ACTTATTAATAAGTCGGTAAGAGCCCTCTATTCAG 31479 29 83.3 0 ...TT....-...............T...A | T [31492] ========== ====== ====== ====== ============================== ===================================== ================== 5 30 96.7 36 GTTAAAACATAACAATAGATGTATTGAAAT # Left flank : CTATACAAGTCAACGATGTAGTGAATGTGGGTATATCCACAAAAATAATCGGCAAGATCAATCTACCTTTGAATGTCAGCAATGTAGTTTTAAAGTTCATGCAGACTACAATGCCGCAAAAAACATTTCTTTGTACAATATTGAGAAGGTAATACAAAAACAATTGGAGTTACAAGAAAAATTAAATCAAACAAAATATAAAGAACAGTATATAGAACAAATGAAAAATATTAATTAAATAACGTAGTAGGAAATAGTTTGGCGGATTTCCACGTCATAAATGGAGAAGTGATACACGGTAAATTTACCAAGTGTCAACGCTCCGTAAGGTAGTATCGAATGTTAAATAAACATTGATACATAAGCATCCTGGATGCTTTGAAGGGTGTAACACAAAGACCGTTACATAATACATTAATTTGCTGGTAAAAAAGCAGTATATTGTTAATATACAAGGGATCGTCGCACATTCATTGTTAATCATCCATATATTATCGGGG # Right flank : AAGAAAACAAATCAATAAGAAACCCTGGGTGCAAGAGTGTGAATTATTAAATTTTTGGTGGATTTCCACGCCATAAATGGAGAAGTAATACAAGGTGAATTTACCAAGTGTCAACGCTCCATAAGGTAGTATCGAATGTTAAATAAACATTGATACATAAGCATCCTGGATGCTTTGAAGGGTGTAACACAAAGACCGTTACATAATACATTAATTTGCTGGTAAAAAAGCAGGGTATTGTTAATACACAAGGGATCGTCGCACAATTCATTGTTAATCATCCATATATTATCGGGGGTTAAAACATAACAATAGATGTATTGAAATTGCTATAATTATATTGTCGAGATACAACTAAGCAAGTTAAAACATAACAATAGATGTATTGAAATACAATAATGTCCTGGCACTCCTGGTATGGCGCTAGTTAAAACATAACAATAGATGTATTGAAATTTGTTCGAATAGTGTCATCCGTATTCTCGTCGTTTGTTAAAACA # Questionable array : NO Score: 5.90 # Score Detail : 1:0, 2:0, 3:3, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAACATAACAATAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 2 31805-32173 **** Predicted by CRISPRDetect 2.4 *** >NZ_NTWX01000029.1 Bacillus cereus strain AFS009035 AFS009035_110_C6_Contig29_140523, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================================= ================== 31805 30 100.0 35 .............................. TGCTATAATTATATTGTCGAGATACAACTAAGCAA 31870 30 100.0 34 .............................. ACAATAATGTCCTGGCACTCCTGGTATGGCGCTA 31934 30 100.0 35 .............................. TTGTTCGAATAGTGTCATCCGTATTCTCGTCGTTT 31999 30 100.0 36 .............................. ATTGAGTAATAATTGCAACAAATGATTTTCTAAGTG 32065 30 96.7 49 ................G............. ATTTTTTATCCAAGAGATATTTCATAAATTCTGCTTGTTAAATTCCTGA 32144 30 80.0 0 .........A...G......A.T.A.G... | ========== ====== ====== ====== ============================== ================================================= ================== 6 30 96.1 38 GTTAAAACATAACAATAGATGTATTGAAAT # Left flank : ATTGAAATATTATGAATGGATACATACAGCACGAGCTTCCTTCGTTAAAACATAACAATAGATGTATTGAAATTTATCAGCAACCATTAAATAAAGGGCGATTGCTGAAGTTAAAACATAACAATAGATGTATTGAAATACTTATTAATAAGTCGGTAAGAGCCCTCTATTCAGGTTTTAACAAACTAATAGATGTATTTAAAAAGAAAACAAATCAATAAGAAACCCTGGGTGCAAGAGTGTGAATTATTAAATTTTTGGTGGATTTCCACGCCATAAATGGAGAAGTAATACAAGGTGAATTTACCAAGTGTCAACGCTCCATAAGGTAGTATCGAATGTTAAATAAACATTGATACATAAGCATCCTGGATGCTTTGAAGGGTGTAACACAAAGACCGTTACATAATACATTAATTTGCTGGTAAAAAAGCAGGGTATTGTTAATACACAAGGGATCGTCGCACAATTCATTGTTAATCATCCATATATTATCGGGG # Right flank : TCTCATAGGGATTTGATTATATTTGTTTATAAATAGAAGCAATGTTATGATATAAATAATTCAATACTAAAAAATCAGATTGCAAAAGGACACACCTACGCATAACCATAGCGTAGGTGTGTCCTTTTTTTGTTTAAGGAGGAAAAAGTTATGGGGAAAACGTTATTTATTGCAGAAAAACCAAAAGTGGCCAATGAAATTATGAAATCGCCACGATTCCGTCACTCACAAAAGTACATTGGGAGCAAACCTTATTACGGTTATTATGAAAATGATCATTATATTGTCAGTTGGTGCCGTGGACATTTACTGGAACTGAAAAATCCGGAAGAGATGGATCCAAAGTATAAAGTGTTTCAGTTAGAACATTTACCTTTAATTTTTCAACCATCGTATAAGGTGATACAAGAAAATGCAGAGCAACTACAAATACTTGTTAAACTGTTACAGCGACCTGATGTTGACCATGCCGTGAATATCTGTGACGCGGACCGCGAGGG # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:0, 3:3, 4:0.80, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAACATAACAATAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA //