Array 1 1990-1362 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMJO01000091.1 Bacillus wiedmannii strain RIVM_BC938, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1989 32 100.0 35 ................................ CAACATGGTTATTAGAAAGTGTAGCGAGTGAAATT 1922 32 100.0 36 ................................ AAGATGTAAGTTAGTTATGCCGAAGAGTGGACAAGA 1854 32 100.0 34 ................................ AGAATAATCGTTATAATGTCACCCAATGTAATTG 1788 32 100.0 34 ................................ AAGAGAAGCGGAAAGAGCGAGCAAAGAATTTAAA 1722 32 100.0 34 ................................ TAGTAAAGATACGGCAAATAATACGAAAGATATT 1656 32 100.0 34 ................................ GTAATAACTTTGATGTTAAATGGCGTGAGGCAGA 1590 32 100.0 33 ................................ ATGATGTGGAAAGCATCAAGACCTAAGAAGGAG 1525 32 100.0 33 ................................ CTTAAATGTAACAAATTGGGTATAACGTGTCTT 1460 32 100.0 35 ................................ TTGATCACGAAAAACCATAAACAGAAAATCGCAAC 1393 32 68.8 0 ......T..CT.G...C..T.....G.A.G.C | ========== ====== ====== ====== ================================ ==================================== ================== 10 32 96.9 34 GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Left flank : AGATGAATATCCACCATTTTTATGGAAGTAGGTGTAACAGTTGCTAGTATTAATAACATATGATGTAAGCACAGCTAACAGTTTCGGACAAAAAAGACTCCGGAAAGTTTCGAAAACATGTCAAAATTATGGTCAAAGAGTCCAAAATTCAGTGTTTGAATGTGTTGTGGATGCAACTCAATTTGCTACTTTAAAGATGGAATTAGTTAAAATTATTAACGAAGATGAGGATAGTCTTAGATTTTATCAGTTAGGTAATAACTATAAAAATAAGGTTGAACATATCGGTATAAAGGAATCAATTGATTTAGAAAGTCCTTTAATTTTTTAGGTGCGAACATATAGCACACATGAAATCCCTCGTACATTCGCACCTGAATTTTTATAATTTATGAGTGAAGTTTAATATTTTTTATACAAATTCTTTTATTAAATAAAGAAATATGTATATTTTTGAACAGAATTAATGTATTTTTGTATGATTTTAAACAAAAATCGCT # Right flank : TGATGAGATAATTGATAGTAATTTAGTGTCTCTGTTGGAGTAAGGGGACCTGCTTCAATTCATACGGCAATTAGTGTTGATCCGATTGACATTACTAGTATGCAGATTACGAAAAGTGTAAATTCTGAGCTGGGGAAGGATAAAGGTTCAGATACGATGAGTATGAAGTATCGTGCTGATTTTGGAGTCTATGTCTTTTATGGAGGTATTAATACATAGTTAGCAGAAAAGACAGGTTTTAATAACGAAGATGCGGCAAAGATTAAAAATGAACTGGCTACATTATTTGAAAATGATGCATCAGCAGCACGCCCTGAAGGAAGTACAGAAGTACATAAAGTTTGTTGGTGGGATCATAATTCAAAACTTGGTCAATACTCCTTTGCAAAAGTACATCGTTTATTAGAGGTTAAACGGAATATTGATGAAATAAAAACAATTGATGATTATGCTGTATTGGTACATGAATTGAATGGTTTAAAAGTTGAGATTATAGATGG # Questionable array : NO Score: 9.11 # Score Detail : 1:0, 2:3, 3:3, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 10816-10320 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMJO01000091.1 Bacillus wiedmannii strain RIVM_BC938, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 10815 32 100.0 34 ................................ TATGATCAGGACGAAAAGCAAAAAATAGATTGGT 10749 32 100.0 34 ................................ CTATTATATAGAAGGTGGTGGGTGATAGATGAAA 10683 32 100.0 34 ................................ TAAGAAAGTGAGGTGAGAAAATGGCAGGGAGAAT 10617 32 100.0 35 ................................ TCAGTAGAAGAAGCACAAAGTATTCCGGCTACAGA 10550 32 100.0 34 ................................ ATCCATGTAATACCATGTCTTCTTATCTTGATTA 10484 32 100.0 34 ................................ CAAACAGAAGCATAACAACAAATAATAAACTAAA 10418 32 96.9 34 ..................A............. AACATGTTTAGTTCGGTGTTACCAGTAATCTATC 10352 32 96.9 0 .........C...................... | C [10339] ========== ====== ====== ====== ================================ =================================== ================== 8 32 99.2 34 GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Left flank : TGGTACTATTACTCTAAAAAGGATGAACACGTATAAAGATAAGAATCATAAAAGTATTCGTAAGTTATCGAAAGAAATTGGCATTTCGTATTCAATGCTTTCAAGAATGTTATCTGGTAAAAAAGATTAAATGATCATACGAAAGTTAAGCTTGATAGGTAGATAGAGAGACAATAGATAGTGAATTTCATTGTAAATTATGAATCAATATATAAAGGGTATTATGAAACTATACATTTTTGTTAATCAGTTAGGTAATAGCTATGAAAATAGGGTCGAACATATTGGGGTAAAAGAATGAATTGATTTAGAAATCTCTTTAATTTTTTAGGTGCGAATGTATAGCAAACATGAAATTCCTAGTACATTCGCACCTAGAATTTTCATGCTTTATGATGGGGATTTATGATTTTTATACAAATTACTTTATTAAATAAAAATATTTGTATATTTTTGGATAAAATTAACGTATTTGTGGTTTATTTCGAACACAAATCGGT # Right flank : AGTTTAGTAGATACTCAACTGGAAGTATCTATATCTGCAGTATCTAACCCAAAAGTAAAAAGTATAAAATGGAGGGAGATTAAATGACCTACATTGCTCATATTCGCGAGAGTGACAGTCAAGTACAAACAGTCGAAGAGCATTTATTAGGAGTAAAAGAACTAGCTGAAACCTATGGAGAAAAAATTGGTATAAAACATTTAGCTGGTTTAGCCGGTATGCTCCATGATATGGGGAAATACACCAATGAGTTTAAAGAATATATATTGGAAGCAGTAAATAATCCTAATTCTCCACCTAAAAGGGGGAGTGTTGACCATTCAACTGCAGGGGGGAAATTGTTATATCAATTATTCCATACAGAAAATATGATTCCTTACAAAGGGATAATATCTGAGATAGTGGGAAATGCCATTATTTCTCACCACGGATACCTTCAAGATTTTTTAAATCCTGATTTAGAATCGCCCTATTTAAATAGAGTGCGAGATAAGCAATTA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTATATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: R [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //