Array 1 587431-590613 **** Predicted by CRISPRDetect 2.4 *** >NZ_LKTP01000001.1 Salegentibacter mishustinae strain KCTC 12263 contig1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 587431 37 100.0 37 ..................................... AAAGCCCTTTTTCTTTAAGAATTGCAGCAACCGTAGG 587505 37 100.0 37 ..................................... TTAGGCGGGGTTACAGGAGCAGTTAAAGGGGCTTTCC 587579 37 100.0 36 ..................................... TAACCTACAAGGCGAGTTCTTAGAAGAGCAGGAAAT 587652 37 100.0 36 ..................................... ATAAGTTTCTACAGGATAACAAAGGGCTCATTCCTC 587725 37 100.0 37 ..................................... TGCCTAACGGAGATTTAATACCGGGGCAAGTTGATCT 587799 37 100.0 35 ..................................... AAGTCAAGGGATATTATAAGAAGTGAAAAGTATAA 587871 37 100.0 35 ..................................... TTTAATCGATATTGCATAGATGTTTTAGGCAACAT 587943 37 100.0 36 ..................................... CAGAATGGAAAAGGAGCAACTGTATAAAGAAATGCT 588016 37 100.0 36 ..................................... TATCCTGTACCTGATAAATCTGCATTTGAGTTTATT 588089 37 100.0 36 ..................................... CTATATTAGAAGTAGATGAGATAGTTTCAAAGAACA 588162 37 100.0 36 ..................................... ACACGCCCTGCAATCTTATCGGCTTGCGAGTATCTA 588235 37 100.0 37 ..................................... AATCCTATGTTGTTTAGAATTATCATAATTGAGTAGG 588309 37 100.0 35 ..................................... TCGAATTTTGATAAGGTTTATGGCAGTATTGATTT 588381 37 100.0 36 ..................................... AATATTTGGTGAAGTCTATAATAGTGGCCACCACGC 588454 37 100.0 36 ..................................... TGCAGCACACCAGCAAGATCTGGATTATCGGGTAAC 588527 37 100.0 37 ..................................... ACCTTTACACTATCTTAATGGCCTTTCCAGAAAAAAA 588601 37 100.0 36 ..................................... TTGGCGGGGTTGCCGCTCAAACTCCTACGGCTGCTG 588674 37 100.0 36 ..................................... AAATCTATAGTAGGGTTTCCGCTGTATTGTCGCTTT 588747 37 100.0 37 ..................................... AGCTTCTCGATTCTTCTTGCGATAACATCCCGAAGGG 588821 37 100.0 34 ..................................... TTGAGTTCGGAACAGGTTCAAGGGTTAGCGTTCC 588892 37 100.0 36 ..................................... ACAATGGTTTCAAAGTTAGAGAAGTTCGTAAAGACT 588965 37 100.0 36 ..................................... GGGGATGCTAATTCAGAATTAGACAGACAGGAAGAA 589038 37 100.0 35 ..................................... AGGATCTCTTTTTTTGAAAGTCCGTTGGTTTCGGT 589110 37 100.0 36 ..................................... TTTACAGGAATTCGAGCGATTATTTGGTAGAGTTCC 589183 37 100.0 36 ..................................... ATTGGCAGTTAATGACACCACAAGAAGTAAAACAAC 589256 37 100.0 36 ..................................... TATAGATTATCTAAATATCCCATTACTTATTTTTCA 589329 37 100.0 36 ..................................... GGATCGTCCAGGTTTAAAATAAACTGGCGAGCAATA 589402 37 100.0 36 ..................................... CAAGACAACGTAAAGTGGTACGACTATGTTTGGGCT 589475 37 100.0 41 ..................................... GTGAAAAGAGAAAAGATAATTATAGGCGTTAAGTTTTCAAA 589553 37 100.0 38 ..................................... GTGGAACTACTGACAATGTAGAGATAGCAACAAAATGT 589628 37 100.0 35 ..................................... GATGCTAACGTTAAAATAGGCAACGAGTATATTAA 589700 37 100.0 36 ..................................... TCCAACACCTCATTAACTCTTTGTTGGGCGTAGCGT 589773 37 100.0 37 ..................................... CTGTTAATCTTTGTAAAGTCTGTAGGATGTGCATCTT 589847 37 100.0 38 ..................................... GGCTTTCTATTATGGGTAAGGATCAACTTAACCGGAAA 589922 37 100.0 35 ..................................... TGACCGTATTTCCTTCATTGAAATCCCAGAAATCA 589994 37 100.0 36 ..................................... CCATTCAAATTAGAATTAAAATAGAGCTTATTAATC 590067 37 100.0 37 ..................................... TTCTGGCACGTTAACCTCATTATCTTCTTCCAATACA 590141 37 100.0 37 ..................................... CGTAGAAAAAAGTTTTGAAGGTTTGTAACGCACGTCT 590215 37 100.0 36 ..................................... ACCGAAGAATGGTTGATTAGGTTAGGGTTTATTAAA 590288 37 100.0 37 ..................................... CAATCTGAAGTTAACGCCTCGGTTATAAGAATAGTAT 590362 37 100.0 35 ..................................... TGAACAGCAATAACACAAACAACAATGAAAACACT 590434 37 94.6 36 ................T.A.................. ATGTTGTACTTTGCTTTGAGTTCTGAGAATTCCATA 590507 37 83.8 35 ....A...AT......T.A.....T............ GATCTACCCTGAACAATTTCCCCTAGAATAATTCT 590579 35 86.5 0 ........G...............AC....--..... | ========== ====== ====== ====== ===================================== ========================================= ================== 44 37 99.2 36 ATTCCAGACCATTCCAATTAGAAACTAGGATTGAAAC # Left flank : TGCCCCCTTGGATTATAAATTTGCACTTTGGAAGGATAAAGTTTATGATACCTATAAACAGCAACTTTATTGTTATGCGGTGTTAATTGAAAAAACTTTTAATACCAGGGTAGAAAAAGGATTCTTGGTATATACGCGTAGCAAACATAAACTGGTTGAGGTTCCAATTCCGGTGGAAGCCAAGCAAGAAATCAAAACCAGTATGAAAAAAATGCTTGATATTATTGAACAAAACAAATTTCCTAAAGCCACTAAATTTAAGAAAAGATGTGTAAATTGTACCTACAGGAACATTTGTATTAAATAAGCGTTCCGGGTATAAATTTATTTTTAAACAACTTATTTTTTTGGCTCATGGCAGTAAGATCGGGACATAACGAATACGGAAACCATTTGAAATATATGGTTTTTATGTTCTTTGACGTATTGAAAAAACAGATATTAGAAGTTGAAGAAATTGCCAGAGGGTACATGATTAAAGGTTCTGGGCAACGTATCGC # Right flank : CCAATATTTAAGCAATTCAAGCAAATACCGCAGTTAAATACGTTTTTTAAGCTCATTTATAGCTATTTCGCGTTCTCGAGCTCTTCCTACTCGAAGCGCGTCTACTAATGCTAACAATTCGTGCAGAATACTATCTTTTAGAGCAGCTTCCGGAGCTGAAGAATATATAGGTATTATACTTTGTCCTCTCAACATTCCTTTACCAGATGGCCAAACATAATTTTCACTACTTTTTATTTGGTCCCTTAAAGGAGCAGCTGAGTGAGAAGTTGGAATACCCCTTACTACCGGTCCCGGTTTTTGTGGAAAAACATACTTTAATCCGAATTGCAAAAAATCAATGAAAGCCAGTTTCATTACTTTTTTTCCTTTAGGATCTAATAGACCTGAATATTTTGAACGAGCTACCGATTCACTCACTTCAGATTGGCTCATCCCTAAAGTCTCGGCTACATATTTTTGTTTCCAGGTGACATCATCAAGACTAATAAGCTTTAACA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCAGACCATTCCAATTAGAAACTAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.80,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : NA //