Array 1 16079-17105 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAAJBM010000012.1 Lactobacillus jensenii strain VA04-2AN NODE_12_length_44270_cov_87.218834, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
     16079	    36	 100.0	    31	....................................	TCGATTTCTTGTTGACCTGCACCAACTTCGT	
     16146	    36	 100.0	    30	....................................	CAACTGCAGCATTAAACGCCCATTGAATAG 	
     16212	    36	 100.0	    30	....................................	AAGACGCAGAAACAAACGGCATCATAGTCA 	
     16278	    36	 100.0	    30	....................................	TTCCAATGGTGAAACAAGAGTTATCAAATA 	
     16344	    36	 100.0	    30	....................................	TGTTTAAAGTAGTAAACAAGACTATTGAGC 	
     16410	    36	 100.0	    30	....................................	CTCTATTTTAATCTGCATACATACATGTAA 	
     16476	    36	 100.0	    30	....................................	AAGACAATACGTAATAAGGATATTGCACAA 	
     16542	    36	 100.0	    30	....................................	AATATATCAAGCCTGAAGCATTAGATGGCT 	
     16608	    36	 100.0	    30	....................................	CTAAAGCTTTTTCAGCATCATTTTTAGTGT 	
     16674	    36	 100.0	    30	....................................	TACGCCTAGTGGCTATATTGACTTAACTAG 	
     16740	    36	 100.0	    30	....................................	AAATTTTTGCAGGAAATTGCCGATGAGCTA 	
     16806	    36	 100.0	    30	....................................	GGCTAAAGACAATAAGATTAATGTTTCTAA 	
     16872	    36	 100.0	    30	....................................	ACTACCAGAATGGGCAGTTGCAGAAAAGAT 	
     16938	    36	 100.0	    30	....................................	GAAAACTTGAAGTCGCAACTCAATAGCGAG 	
     17004	    36	 100.0	    30	....................................	AAAAGTAGTCGATGAATATTTAAGGTTAGT 	
     17070	    36	  97.2	     0	...................................A	|                              	
==========	======	======	======	====================================	===============================	==================
        16	    36	  99.8	    30	GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC	                               	       

# Left flank :   CACAGGATTATCTTAATTCTTATCAGAATAAGATTATTTCAAATCTGTTTGATACTTTAAATGAAAATCAGAGAAATAAAATATTTAATACGTGGCGTCAGCTGAGTACTGATATTCAAGATATAATATTTATGACTGATTTACCAATTGAAGTTGGTGAAAATCTAGATTTAAAGAAGCTATTCAAATTTGATGGAATTCATTTTGATGATTCTGTATTAAGTGATCCTTATGCTATAATTGAAACAGTTGTTAAAATTCATATTGAATGTAAATTGAATTCGGTTGTTACTTTTGCAAACGTAAGTCATTATCTTACAAAAGAACAATTGAATAACTTAATTACCTTTATAAACGAAGTAAATATGCCTTTGATATTAATAGAATTTTCATCTTCAGATTTTAAGGTTGTTAGTGGGGATGCAAGAGTCTGTTATATTGATGAGGATTTTGTCGACTGGTACTGATTTTAAATCTGAGAAGCTGATGATAAAATGTCG
# Right flank :  AGTAACAAAAACCAATTTAATTAATATGATCATATTTTAATTTGAGGAGAAAACTAAGTATGTGGACATTTCTTAAATTTTTTCAGACACCAGTAGGCTATTTAATTGGAATGGCTATTCTTGTCATATTGCAATACGTGTATGAATGGATAAGAGACGAGCGCTAAAATATTGTTTGGTTTATTGGCAATTAATATACTTTAGAAAGCTGCAAAACACTATAACTTATAGGAGATAAAAATGGAAGGTTTAGCATATGTTATTCTATTTATAGGAGCTTTTATATATTACTATTGTAAAAATAACCGTAAAAAATAATACGATTTTTAAAAGTTACTGAGGGGGCATAATATGGATGCAATTATTGATTTCTTTACTAACCCTATATGGATTACATTTATAACAATTTTATATTTTTCTATGGAGTTTATAGAAAATAAGCGAAAAAAATAGCGCTTTTTTATTGGTAAAGTAATAACAATTATGTCAGTTTTAAAAGC

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAAGGTTGTTAAATCAGTAAGTTGAAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-1.20,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [63.3-80.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.27   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//