Array 1 123980-123425 **** Predicted by CRISPRDetect 2.4 *** >NZ_VJXY01000016.1 Komarekiella sp. 'clone 1' NODE_16_length_159764_cov_212.352976, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 123979 37 100.0 37 ..................................... TCACAGGTTCTCAAATTGAGGTAGAAATCGCTGAAAG 123905 37 100.0 35 ..................................... GATATTCCTGCCAACGATTGGTAATGCGCTCAGGA 123833 37 97.3 36 ...........................A......... ACAAGTGCAACTTTTGAGCCAAGGACAAGAAATTTG 123760 37 100.0 37 ..................................... TCACAGGTTCTCAAATTGAGGTAGAAATCGCTGAAAG 123686 37 100.0 41 ..................................... GAATTCTTTGCAGTGTGCGACGGGTGCGACGAGAGGCTAGA 123608 37 100.0 34 ..................................... TTACTGGTCACAGTTCCCACTAAATCAATCACTT 123537 37 91.9 37 ....C..............T.......A......... GGAATTGATAAATACAAACGTTTGTTAGCAGAGGTAT 123463 37 75.7 0 ...TC...A.C.C..............AA.....GG. | G,C [123429,123435] ========== ====== ====== ====== ===================================== ========================================= ================== 8 37 95.6 37 ATTCAAATTAACTAAAATCCCTATTAGGGATTGAAAC # Left flank : TGAAACATGAGTGCCATAAACGACCAGTGGAAGACTTGGGAATTCAAATTAACTAAAATCCCTATTAGGGATTGAAACGCCAGTGAAGCCGAGAACCTCAGTGACGATCGCGCATTCAAATTAACTAAAATCCCTATTAGGGATTGAAACAACTCTCTCAAACAATTACTTCGCGACTCTCAAAAATTCAAATTAACTAAAATCCCTATTAGGGATTGAAACTGGAGACTCATTAACGATTCGTTTTCTGTGTGGAATTCAAATTAACTAAAATCCCTATTAGGGATTGAAACTGCGATAAGTGATAATCCAAGCAGCGCGGAGAAGATTCAAATTAACTAAAATCCCTATTAGGGATTGAAACACAAGTGCAACTTTTGAGCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGACAAGAAATTTG # Right flank : ACAGGTTTTTATCATGAATCAGGGGTTGTTGATTCTCGAACCTGACCCTCAATCATCTGAAGCGATCAAAGCTCTAGTTTACAACCGTTGTAGCAGACTTAAACCGTGGGTATCAGTACCACATGTATTGAAAAGAGAGTATTCACCAGCTAACTCTTGCATTTGCTGTGATTCCAAAGCGCTGGGTTGCCAAGGGTTAGGATTATTGTAAGCGTAGAAACTTTCAACGCCATCGATACCCTTTTGGGCTGCTGCTGGAATTAGGTCGAAATGCGATCGCTTGTACCGAGCTGGATGAGCAAGTACTGCTAATCCTCCAGCTTCGTGAACAGCTGCAATCACGTTACTTGCCTGATATTCTTTACCTGTAGTAGCCTTTTTTTGCAGATAGGGTTTCATACTAGAATGTTCTGGCTCGAAAGCATAAGCCAAAATATGAACTTCTATATCCAAAAGATTGGCATTGATTTCCACGCCACTCCACAGGTGAGGAGTCCTTG # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCAAATTAACTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-15.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 2 128088-124116 **** Predicted by CRISPRDetect 2.4 *** >NZ_VJXY01000016.1 Komarekiella sp. 'clone 1' NODE_16_length_159764_cov_212.352976, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 128087 37 100.0 35 ..................................... AGAGGGACAAATATTAGCCGACGCACCAGTGAAAT 128015 37 100.0 35 ..................................... TTATCTTCACTGCGTAAATCTTTGATTTCAATTGA 127943 37 100.0 34 ..................................... TCACAAATAAAACCTTAAAGGAAATAAATAACTT 127872 37 100.0 35 ..................................... AGCAAAAATGGTGCAATTGGAATTAGTGAAATCAC 127800 37 100.0 41 ..................................... AGGCGAGTACTTTTGATTCATGGCAAACAAAGCCACCACAC 127722 37 100.0 34 ..................................... GGAAACAAAATATATTCTGTTGTGCAAACTTACA 127651 37 100.0 41 ..................................... TTCCTCCAAGCAAACTTCGCTTAGGGTTTCCCGACAGCCAG 127573 37 100.0 44 ..................................... AAAGATTTACGAATGCTAGATTATGCTTCTGTAAAAGGCGAAAA 127492 37 100.0 36 ..................................... AGCTGCATTTAAGTTCATTGAATTAAAAGTGTTAGC 127419 37 100.0 35 ..................................... CCTCAAATACAGACACTACGTGATTTTTTAAAAGA 127347 37 100.0 36 ..................................... TGAGATTACTGTCTCGCTGAACTTTAGACCATTCAA 127274 37 100.0 35 ..................................... AACGCAACTAGTACTGAAATTGTTACAGCTACTAT 127202 37 100.0 40 ..................................... CTGATTTTGCTCTCAGCAATAGCAGCCAATATAAAATCGG 127125 37 100.0 35 ..................................... TACACTAGGATTACACTCGATAAAAAAACAAAAAT 127053 37 100.0 34 ..................................... CACCATTAACTAACGCAATTGCAATATTGTTTCT 126982 37 100.0 39 ..................................... CTACTGCCTGCAATTTGTGTCCATTTAAAAACCGTACTA 126906 37 100.0 35 ..................................... AACGCTAACACGCGGCTATTAACTATATCCAGAGG 126834 37 100.0 34 ..................................... AAAAAAATTGGCAACGATGCATTGTATGAAGCAA 126763 37 100.0 34 ..................................... AAAATTCGGGTTTTGGTTGTGGATGCTAGTATAG 126692 37 100.0 35 ..................................... AAGCCTGGTAGTGGTGAGATTATTGTGCGACTCAA 126620 37 100.0 34 ..................................... CGAATCCCTCCCTCTCCGTAGAATATGTGAGCAG 126549 37 100.0 35 ..................................... ATGCTATACGCAAAAGGCATTGATTCCCTAGCATA 126477 37 100.0 37 ..................................... AGCAACAGAAAATGTTGTTGACAGCAAACACTTACTA 126403 37 100.0 36 ..................................... GCAATCGCTATCTTCTTACACACAAAAAAAGGGATA 126330 37 100.0 39 ..................................... AACAAAAATGACAGCACAAGAAACAGGTATACACTAGGA 126254 37 100.0 40 ..................................... GTAGCAAGTGTCAGCAATCCTATAGCTTTGTCAATATAAG 126177 37 100.0 35 ..................................... AAATGCACTACCACGCTCGCTTCCACAAGCAGCAG 126105 37 100.0 35 ..................................... CAGAGCACAACGGCGGAATTTTTTGAGTCTCTTGA 126033 37 100.0 35 ..................................... TTGGAGGTGACTGCTCCAGGGCAACAGTCTACAAG 125961 37 100.0 40 ..................................... AGCTACGTATTTATTACAACAATACTACTGAAGCTTTCAA 125884 37 100.0 35 ..................................... TTAGGGTATCCAGGAGGACAGTATCAGCAAGGAAG 125812 37 100.0 38 ..................................... GGTATTATTTAGGATTAGTACCTAGGTTTTCTAATCAA 125737 37 100.0 39 ..................................... TGAAACTCATACTACAGCCAATGGCGAGTCAATGCTTAT 125661 37 100.0 35 ..................................... AACAGTGACGTAAGAACCTCTAATGTAGGTGTTGC 125589 37 100.0 36 ..................................... TATTCTTTATATTTGTGATCCTCACTATGATATCGG 125516 37 100.0 33 ..................................... GTTAACGGTGTAGTTGATGTGAGGTTTTGATAT 125446 37 100.0 36 ..................................... ACAGCTGTAGCGGGGGTGCATGGATGGCTAACAAGG 125373 37 100.0 35 ..................................... GTTTGGCTTTTTCACTGAAAGTTACCAAAATTGAA 125301 37 100.0 34 ..................................... GGATATACCTGGGAGCCTGAATCAGAGGACGAGC 125230 37 100.0 33 ..................................... CAGTTAATTTTAAGTGTTTGGAATGTGGTGAAG 125160 37 100.0 34 ..................................... TTGAAATATATTCCTAACACATTTTTAGTAGAAA 125089 37 100.0 34 ..................................... AATTCCCTCAAAAATCAGGTAAGTACTCTAGGAA 125018 37 100.0 37 ..................................... TTGAATATAAGATGAAGAAAAAATTTGCATAAATTTA 124944 37 100.0 36 ..................................... AACGGCATGATTGAAGCTGGTAGCAGTAAGCAAGCA 124871 37 100.0 33 ..................................... GCGAAAATGCAACAGCTAGCCGTTATCGTTTTG 124801 37 100.0 35 ..................................... ACGACCAACGACATGACGAGCCCTCACGAACCTTT 124729 37 100.0 32 ..................................... ATTATCGAATCCTTTTACACTCACCTCGCCAC 124660 37 100.0 35 ..................................... GTTGCTACAGACTTTGTTGATGATTGAATACCAGA 124588 37 100.0 41 ..................................... CTTGTACCTGTTCTTCCACAACTGCCAACAGCACTACACGA 124510 37 100.0 35 ..................................... ATGAGTGCCATAAACGACCAGTGGAAGACTTGGGA 124438 37 100.0 35 ..................................... GCCAGTGAAGCCGAGAACCTCAGTGACGATCGCGC 124366 37 100.0 35 ..................................... AACTCTCTCAAACAATTACTTCGCGACTCTCAAAA 124294 37 100.0 34 ..................................... TGGAGACTCATTAACGATTCGTTTTCTGTGTGGA 124223 37 100.0 34 ..................................... TGCGATAAGTGATAATCCAAGCAGCGCGGAGAAG 124152 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================ ================== 55 37 100.0 36 ATTCAAATTAACTAAAATCCCTATTAGGGATTGAAAC # Left flank : ATGTCCTGCGCCTGTTTGTTGCAGGGCATAGTGGAACTACCGAACGCATCCTTCAAAATCTGCACGAACTGTTAGAGCGATCGCTCGGACACCCTTATACTTTGAAAGTCATTGATGTTTTAACTAATCCAGAACAAGCGGAAATCAATCAGGTTTCTGCAACTCCTACCCTTGTTAAAGTTTGGCCTCACCCGATTCGGCGAATTGTTGGCGATTTGGATCATGTGGAGAAAATTTTACAGATGTTAGCCACCAAAGAAAAGCTTTAAATTTGATTAAGACTATTAATTTGTCAGATGCGACAATTAAGTTGGTCATGGTTTGGGGTGTGAGGTGTGTGTAGTTTACCACCATAGGCATTGCCCCAAAGTCAGCTAAGCTCATTAATGATATGCTTTGCAGTCAGACTGGTTTTTGCCGAGTGCGCGGATGGGTAGGTGTTGGAGAAGAGGCGACAAAAAAATGGCTGAATTCCCTTGTGTGTAATAAATTGATGGCGA # Right flank : ACAAGTGCAACTTTTGAGCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGACAAGAAATTTGATTCAAATTAACTAAAATCCCTATTAGGGATTGAAACTCACAGGTTCTCAAATTGAGGTAGAAATCGCTGAAAGATTCAAATTAACTAAAATCCCTATTAGGGATTGAAACGATATTCCTGCCAACGATTGGTAATGCGCTCAGGAATTCAAATTAACTAAAATCCCTATTAGAGATTGAAACACAAGTGCAACTTTTGAGCCAAGGACAAGAAATTTGATTCAAATTAACTAAAATCCCTATTAGGGATTGAAACTCACAGGTTCTCAAATTGAGGTAGAAATCGCTGAAAGATTCAAATTAACTAAAATCCCTATTAGGGATTGAAACGAATTCTTTGCAGTGTGCGACGGGTGCGACGAGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCAAATTAACTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [21.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA // Array 1 261276-256731 **** Predicted by CRISPRDetect 2.4 *** >NZ_VJXY01000001.1 Komarekiella sp. 'clone 1' NODE_1_length_630957_cov_210.155655, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 261275 37 100.0 33 ..................................... TTAAATAAGTATCCCTTAGCAGCATTGAGAATG 261205 37 100.0 34 ..................................... CTACCATTACTTTTTCGCCTTCTGGCTCTGTTTT 261134 37 100.0 36 ..................................... AACTATGCTGTATTTTGTGTTCTTGCTTCGCCTAGA 261061 37 100.0 37 ..................................... GGGCTAAGCTTTCTCCTCTTATTCAGCGTATTGCATT 260987 37 100.0 34 ..................................... TTGAACAGCAGTTTGACCTGTATTAGCAAGAATC 260916 37 100.0 37 ..................................... GCTCTAGTCGAGCAAAAGAGTTAAAGCAACTGAAAAG 260842 37 100.0 35 ..................................... ATAGCCCAAGAATTACTATCAGAAGAATCGGAGTT 260770 37 100.0 42 ..................................... AAAACTTTTAGAAAAAGTTGCCCAAATGAAAAATCATTCCAA 260691 37 100.0 35 ..................................... TACGAACGCAGTGGTACAACTACGTAACGTGACTA 260619 37 100.0 34 ..................................... TTTACATTTTTCTAGCGCTATAGATGCACTTTCA 260548 37 100.0 34 ..................................... TTTAAAGTTTATCCCACTACTTCCAACCTGCTTT 260477 37 100.0 34 ..................................... ATTAGCTCTCAAAATGCGCTAATCAACCTAAATT 260406 37 100.0 34 ..................................... GTCTGGCAAATATCCTTTCTCTGGCTGATACAAA 260335 37 100.0 36 ..................................... ACTAGCAGCCCACTCTAACAATTCTTGCTGCTTAGG 260262 37 100.0 35 ..................................... AACACGACTATAAACTACAGCACCGCTGGCACGTA 260190 37 100.0 34 ..................................... ATAGCCTTTGCAGCAGTTGGCTTTTTCGCAGCAC 260119 37 100.0 33 ..................................... ACGTCCGTAACCTAGAGCAGTTCGCTGACATGG 260049 37 100.0 34 ..................................... TACTTCTGCTTACGGACTCCATCAGCACAGTTAG 259978 37 100.0 34 ..................................... AGATTTACTGGATTTTCTCCACTTGGAGTACCGC 259907 37 100.0 35 ..................................... AATTTTCAATGCTCTAAACGTTCAGGCTGTTTTAA 259835 37 100.0 39 ..................................... TACCCCAATCACGGGCATTGAGAGATATGCCACATTCAT 259759 37 100.0 34 ..................................... GATAGAGAGACTTGCCAGAGCCAAACTGACCAAA 259688 37 100.0 35 ..................................... GTATACGCCGAACTACAAGCGCGAACAGAGCTAGA 259616 37 100.0 35 ..................................... GGACAGATGCCCAAGACCGGGCTGACCTACTCCGA 259544 37 100.0 35 ..................................... TCTAGCAGAATTACGGAGAGATTGAACACCAGAAG 259472 37 100.0 35 ..................................... CAATCTCAAGTTGATAGAGAGACTTGCCAGAGCCA 259400 37 100.0 36 ..................................... ATCCATATCATTAGCCCCATCTTTAAATGGATCGAG 259327 37 100.0 34 ..................................... CGATAAATTGAAAAGCGCAAATCATGTGGATATC 259256 37 100.0 34 ..................................... CAGGAGTGGGACAAGTAAAAGCTTGTGCAGGCAG 259185 37 100.0 37 ..................................... TCTTGGTTCACAGTGCTGGGGAACTGTTGCCAGCCAT 259111 37 100.0 37 ..................................... GGGCTCTAATGGTTATTGAAGGTGTTTCTTACACAGA 259037 37 100.0 35 ..................................... GTGTAGAGTTGTTGCATACTGGTCACTTTAGTAAA 258965 37 100.0 33 ..................................... CCACCAACTGACGCTGGTGTATCCATATTTAGG 258895 37 100.0 31 ..................................... ATTCGAGTCCCAGTCAGCAAAATTAATGATT 258827 37 100.0 36 ..................................... AGACTCAATGAGACTATCAACTGCTTGGGATAAAAT 258754 37 100.0 37 ..................................... CTCAGTGATTGTTCCTGATCTACATAAAACTGGTACA 258680 37 100.0 36 ..................................... GCTAACGGTACGCTTTTTACCTACTTCGAGACTAAA 258607 37 100.0 36 ..................................... TAAAGAACACAAAATATATAGGAGTTACTTTAAAAG 258534 37 100.0 35 ..................................... AGCGATTCGCAGAGAACTAAATAGTTATATATGGA 258462 37 100.0 36 ..................................... TCGTGGTAATATTATTCTAGAAGATTCTAGAATAAT 258389 37 97.3 35 ...................T................. CAAAATGGTAAAAATGATGTTAAATACTGGGAACC 258317 37 100.0 40 ..................................... CTGATAAAACTGCCACGGTTAATATTGCAAGATGTTTAAA 258240 37 100.0 41 ..................................... AGACATTTCGTTGTATGACATAGAAAGCGCGTAGGCGTAAA 258162 37 100.0 39 ..................................... TTGAATAGCGCTTTTATTATCCTGAAGAAATGTATATAA 258086 37 100.0 38 ..................................... TTTTGGCGGCAAACACAGAGATGCCCACCGAATCATTG 258011 37 100.0 34 ..................................... GATATCCAACAATTCCAGGTTAGACGGATCAGCC 257940 37 100.0 34 ..................................... AGCTTTATCTGTATAAATAAGATTAATCATATTC 257869 37 100.0 34 ..................................... GAAACAGCAGCGTAACAACTGTGGTAGATAGTGG 257798 37 100.0 41 ..................................... GGCGGTGATTTTGACTTAATCAATCGAGAAATGCGAAAAGA 257720 37 100.0 37 ..................................... TCGTAACCTATCTCTTTAAAAAATGTCATCTGTTGCA 257646 37 100.0 37 ..................................... TCCCGTATCTTTGATCATGGGAATGCAATCAGATCCA 257572 37 100.0 40 ..................................... TGACTAATCAAATATCAAATTACATTACTACTCACATAGC 257495 37 100.0 37 ..................................... TAGTAGTATTTTTTGCTAAAATTGAGAACAGGTTTAA 257421 37 97.3 33 ........T............................ CTCTGATGAAATACCGTTGCTCGATGCTTTAAT 257351 37 97.3 38 ........T............................ CAAAAATAGCAGGTAATTCCGCAAATCTTCCTAATAAT 257276 37 97.3 37 ........T............................ TGGGCTGCTGATTGGAGGGGCGAATGAACGTTGCAAA 257202 37 97.3 35 ........T............................ TATATTGCTCAACTGCATCATTGAAAAACTTAAAA 257130 37 97.3 39 ........T............................ TTTGAAATCAGTATTGATGACCATGATTGTTGGTACTAA 257054 37 97.3 35 ........T............................ TAATCTCTTTACATCGGCTGCATTTTTTAACTTGA 256982 37 97.3 36 ........T............................ GGGATTAATTAGTGGTTTAAGTGTGCTAGTGCCATC 256909 37 97.3 33 ........T............................ TGGTAGCCGCTCTAGAAGCGCTCAAACAACCAG 256839 37 97.3 33 ........T............................ ACTACTGGGCTAATCTCTCAAATTAGAGCGAGA 256769 37 83.8 0 ........T.................AAC...C...A | C,C [256734,256737] ========== ====== ====== ====== ===================================== ========================================== ================== 63 37 99.3 36 GTTCCAATCAATCAAAATCCCTATTAGGGATTGAAAC # Left flank : TTCTGTTCTCAAGTCGTATGGTCAGTGGATGCAACTGAGTGTGTTTGAGTGCGATTTGACCTCTACCCAGTATGCTAAACTGCGATCGCGTTTAGCCAAATTGATTAAACCTGACACTGATAGCGTGCGTTTTTACTTTCTTTGTGGCTGTTGTCAGGGGAAAGTCGAACGCATTGGCGGAGAAAAACCACGAGACGAAACAATTTTCTTTGCTGAGTCCCCTTTTGGCTAGGTTACTGTATGACAAATGCGCGGAAGGGTAGGTGTACAAATTCCATAGCCTGAAAAAAGTACTTCTATCTCAACTCCAGCAAGGATTCCAGCCCACTACTAACCTATTCCTCATCCGCGCAATCTCTGAAACGCTTACAAAAATATGGTTTCAGTCTTCACACTTTACCCGCTCTCTTCCCAAGCAACTTTCCTAATGCTATGATTGCTCTTGAATAACGCAACCGCACCTTGAAAACTAAATATAGCTTGGCTTTGAGGCTCCCGCC # Right flank : ATGAATGTAGAGACGTAGCACTGCTACGTCTCTACAAGGGTTCTAGATAACATATATTTAATTTCTAAAGATATCTATTAGGTATTGAAACAATCTTTGGCGCTAAAATCAGTTTTATGGATGCAAGAGTGTAAGATAGCGGCGAAAATAGATGGATACCCTAATTACACCAGAAAGAATTGATTTGCCTCCTGGCGCTGTCTTGAAACTCTTGGGAAACTGGCAAGATTACCAAAAGCTGCTTTTGCAGTTTGGCGATCGCACTGTGCCTCGCATTAAATATCGGCCAGGAGAGATTTTATTAATCGCTCCTTTGCCTGAACATGGGAAAAAGGTAAGTTTACTTGCATAGGTGGTTGAGAAACTTTTTAGCAATCTGAATAGGAGCGATCGCCTTGAAAATAAGAGCTATGATGATGTAGCGTTTTTACCAGAATCCATGTCGGACATAATAGTAACAGTCAACGGCATCCCTATGTGCCATAATCTGGGTTACGCTT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATCAATCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 1 135487-125392 **** Predicted by CRISPRDetect 2.4 *** >NZ_VJXY01000020.1 Komarekiella sp. 'clone 1' NODE_20_length_137759_cov_214.724730, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 135486 37 97.3 34 ....................................T GGTTATCCTCTCCAGCCCGTATGTCAACTCTCAA 135415 37 97.3 34 ....................................T AGAAGTCTGAGCAGTACAAACTAATCGGAAAATC 135344 37 97.3 39 ....................................T TTCAATGGAGCAATCAAATTTATTTTTGAATAGCCAGAA 135268 37 97.3 36 ....................................T CTGAACGTTTAGAGCATTGTAAATTTAGACAATCAA 135195 37 97.3 39 ....................................T TGAAGCCAATTATTACCACTAAATGTTTGCGGTTGAATT 135119 37 97.3 35 ....................................T ATCTTTAGGATTAGTAAGCCAGCGAAAATAATCGG 135047 37 97.3 37 ....................................T CTTCAAGCTGCCCCAATTAAGGAGTGATATGCAAGAT 134973 37 97.3 41 ....................................T ACAATATTCATATAGAAACAAAAAAAAGCATGAGAGTAAAA 134895 37 97.3 35 ....................................T TTTGTTAGTCTTGCGCTGTACTTTCTGCTTATTCT 134823 37 97.3 36 ....................................T TGGCAATCCCATCCCTAATCCTTGCGGTGTGGTATT 134750 37 97.3 35 ....................................T CTAAATAAAGTCCTAGTTGGCATTTTTGGAGATAT 134678 37 97.3 37 ....................................T ACAACTTCCTTTATTTTCTCCTCAAGGTTTTCCTGTA 134604 37 97.3 36 ....................................T GAATTCGAGCAAGCAATCTAGGTGAATGAATGTGAA 134531 37 97.3 36 ....................................T AATCGTATTGTGTTGTGACGCGGGCGATATTGAAAA 134458 37 100.0 35 ..................................... GATGCAAGTCTTGGGTAAGTAACCATTCGCGAAAT 134386 37 100.0 35 ..................................... AACTGAAAAGTATCAGTATATGGCGTGAAAATCAC 134314 37 100.0 34 ..................................... AGAGTCTTTATTTGGTCACAGACTGGCTATCAAC 134243 37 100.0 36 ..................................... GAGTATTACTGGCATTAACTCATTGAGACTGTAATA 134170 37 100.0 40 ..................................... TCAGTAACGCTAACTTTTTGTGAAAGTAGTATCCATCCAT 134093 37 100.0 35 ..................................... TAAACTCACTAAACGTACTAAGTTCTGAATGATAA 134021 37 100.0 36 ..................................... GAATCTATACCGACAATAACTACATTAATATCTAAT 133948 37 100.0 36 ..................................... TTTTATACCATAATCGTTTATCAACTATTTCTTTGA 133875 37 100.0 36 ..................................... TACCTATTTTTTGCGAATAACAAAAATCATAAATAT 133802 37 100.0 37 ..................................... ATATAGGAATTAGAAGTGGTGTTCCAAGAATATTAGG 133728 37 100.0 36 ..................................... ATCTAAATATTCAGTGACTAAATAAAATGATTCCGG 133655 37 100.0 34 ..................................... AAATAAATTCCACCACTTGGATGTAAACCCCCAA 133584 37 100.0 36 ..................................... TTCTGTCAGCCTGATTTTCACCTTGCTAATTCCCTC 133511 37 100.0 36 ..................................... ATCTCTGATGAAGACCTAACTATCAGAGTAATAGGA 133438 37 100.0 36 ..................................... TAATTCAAATGCAGAATATAAAATACCACTAATAGA 133365 37 100.0 36 ..................................... TGATTTTGATACGGATGCTATAGATGCTCCATTCAG 133292 37 100.0 35 ..................................... AGAATTATTTCATCATTCATATTTTATCTTGTAAG 133220 37 100.0 35 ..................................... TAAAAATCTCTACACTTTACTAACACCTAAAAATA 133148 37 100.0 34 ..................................... TTTGACCTTTAGAATTATGAACACAAGGAACAAA 133077 37 100.0 37 ..................................... TTAATCTTGATAGACATTCAATATAGTTTGAAATTTC 133003 37 100.0 36 ..................................... AACATTATAGCTATCAATCTATAATAGCACTTTTAG 132930 37 100.0 39 ..................................... TACTACATCTTGCTCAAAAAATTCAACCTGACATCCCTG 132854 37 100.0 35 ..................................... TTTTTAAATCCAATTTTTTCATAAAAGCTGATAGC 132782 37 100.0 34 ..................................... TTATATTCTCCTTCAAGGTAGTACTCGCCATCGC 132711 37 100.0 34 ..................................... AGAGCTACCACCAGGTTGCTGTCCTTTATTTCGT 132640 37 100.0 33 ..................................... GCAACGGTTCCAGTGCTAGTTAAAGTGATTACT 132570 37 100.0 34 ..................................... TAAAGCTGACATAGCTTATTGATTTTTAAATAGT 132499 37 100.0 37 ..................................... ATGCTTGATTTTCAACTTTAACCATATTTCCAGGGAT 132425 37 100.0 35 ..................................... AGACATATAAGAGTCACTGTTTTCTTAAAACAACC 132353 37 100.0 34 ..................................... ATTTGATGATCGCTTATTGCATCACAACGACATT 132282 37 100.0 40 ..................................... TGTGTTGTACTGTTCTTTTCTGGTGTGCCAACATTAATTT 132205 37 100.0 35 ..................................... GCTTTAGCATTTCTAGCTTTAAGAAATAAGCTCCA 132133 37 100.0 39 ..................................... AGAGCCGCACGGCGCGCATCCTGTACCATTAATCGCCGG 132057 37 100.0 34 ..................................... CTTTCTCAGTCGTATTCCGATTACGGATTAAATA 131986 37 100.0 39 ..................................... AAGGGATATACGCTGCCAAGCTTGCGGTCACTGCCTCTC 131910 37 100.0 35 ..................................... GTGGGAACTGGGGATAGTCATGCTACTACAACTTT 131838 37 100.0 32 ..................................... CTTTATGCTGCTAATCTTACATACGTAGATAC 131769 37 100.0 36 ..................................... GAGATTGATACCACGCTTACGATTAGTGCCTGCCTA 131696 37 100.0 35 ..................................... ATATTTCCAACGGCAAGGGTAGGGAAAAACTATTA 131624 37 100.0 36 ..................................... CATTTCCACCCGACTGAGCGATGAGAATCTAGCAAG 131551 37 100.0 34 ..................................... ATCGCTATGTTGAAGACAAGCCACTTGAATACTG 131480 37 100.0 39 ..................................... ATGCCCAATGATTGCAGACTTAGCAGCAGATGAATTAGA 131404 37 100.0 34 ..................................... GGATAGCTACAAAGAGGCACTTCACAGCTTGACG 131333 37 100.0 34 ..................................... TTGACTATTGACAAAACACGCTCACGCGGGCCAG 131262 37 100.0 35 ..................................... GGCGCGGGCCCACGCTTGGAAGTTGAGGCGTGATG 131190 37 100.0 33 ..................................... ATGATATTTAAAAATCAGTGGTAAACTCTCAGT 131120 37 100.0 35 ..................................... TTATAAATTCAAAAGACTTACCATTCATTTTTATT 131048 37 100.0 34 ..................................... AGAAAATTCATCTACAAGCATCTGACTTTTACCT 130977 37 100.0 34 ..................................... AACTGTTTTCTCGCTCCAAAAGCGGAAAAAACTT 130906 37 100.0 36 ..................................... AGATTTACAAACTCATACTCATATCTACTACAACAA 130833 37 100.0 35 ..................................... CTACCGTAAAGTTCTTGACCTCCTAAAGTAATTCT 130761 37 100.0 33 ..................................... AAAGGGTCGATTACTTTTACCACATGAGTGACA 130691 37 100.0 40 ..................................... ATAAGTTTAATGGCTATAAAAAATCCCTGGAACACTTTAA 130614 37 100.0 38 ..................................... TTGTAAGATATGGACAAAATATAGGTACTCAAGATGGT 130539 37 100.0 35 ..................................... GTTGAGCTAGATTAGCTCTAGACTCCATTATTTGC 130467 37 100.0 35 ..................................... CCAATGGAGACATCTTGACATTTAGCGGGAACTCT 130395 37 100.0 35 ..................................... ACCTTCTAAAGGATTACGACGCTGCTTAAGCTCAA 130323 37 100.0 35 ..................................... AGTCCCAGGTGAAATACTTACACTAGCAACACTGT 130251 37 100.0 40 ..................................... TGAATGATATTTGCATCGACAATGCATCAACAATTTCACC 130174 37 100.0 38 ..................................... TGCTCTACTGTACTTATTTGCTTGGCAACGGTTGTAGG 130099 37 100.0 35 ..................................... ATTTTTACCATCTTGGGGGCATTCGTTTCTGGCAT 130027 37 100.0 36 ..................................... TGGGAGAATAAGCGGGGTATCTGTTCCCAGGTCAAC 129954 37 100.0 36 ..................................... TTACACTTTTAATCAACCGCTGTACGAAGTAGCTTA 129881 37 100.0 34 ..................................... TTTACGGCGTCCCACCCGGATTCACATTATGTAA 129810 37 100.0 35 ..................................... TCTGCTGATGCGGCTGAAGGCGTGATAAAAATGGA 129738 37 100.0 37 ..................................... GCTTAGCTAAGACATATAAAGATCAAAAAATTCAAGC 129664 37 100.0 35 ..................................... TCGCGTCCTCAGTGATTATTCTGCTTTTACATAAA 129592 37 100.0 35 ..................................... ATGGCTTTTTGAGAATGATCAACACGAGCCGCCAC 129520 37 100.0 40 ..................................... GATTATTAAGCGTTCCATTATAGTTGCTGGAACAACCCAA 129443 37 100.0 33 ..................................... GCTCAGTTAATAAACAACACGAAACCGAGGCTT 129373 37 100.0 37 ..................................... AGGAAATGCCGCCTATCTCCCCTGAAACCCCTGAAAA 129299 37 100.0 32 ..................................... CTTTCTTGGGCTAACCATCCCCAAAGTAATGG 129230 37 100.0 33 ..................................... TTTGGACATAGCCCCTGCAATATCATCATACAT 129160 37 100.0 38 ..................................... AGGATACCGCCAGTCAGCCCCCCGTGATTGTGAGAGGG 129085 37 100.0 35 ..................................... TAGTCTATCGAGGTCAATGTTGAAATGTTTAGCCA 129013 37 100.0 33 ..................................... TTTAATATCAATGATATGAATAGATATCACTGA 128943 37 100.0 39 ..................................... GCTACACTCGCACCCGCGCAAATGATTGTAGATGCTCAA 128867 37 100.0 37 ..................................... TCGCTTAGAGCAAGGAATGGAACTTTGGGAAACTCCC 128793 37 100.0 37 ..................................... TTAAAAACTAGCGGTGATAGTGTAAGTGCGATTGCAG 128719 37 100.0 36 ..................................... TTAAAAACCCAAAATTCCTTGGGAGATAATCTTATA 128646 37 100.0 31 ..................................... TCTGGCTAAAAAAGGTTACGTAATTAACCGC 128578 37 100.0 32 ..................................... TACGAGATAGGAGAGCAGTCCAATGATTACCG 128509 37 100.0 44 ..................................... TTTTACAGAGATAATTGATTTAGTGTACAGATATCAATTATGCA 128428 37 100.0 38 ..................................... TTTTACAGAGTTTCTATAAATCTCTGGAACTCCCGAAA 128353 37 100.0 39 ..................................... GTACAATTTCTACCGGTGTAGGAGGTGCTTTAGGCACAA 128277 37 97.3 38 ..........T.......................... ATGTGCTTTGGCGTATATACCGTAACCCCAACATACGA 128202 37 100.0 34 ..................................... AATTTGCACCTAATACAGTCCCGGCAGCACTACC 128131 37 100.0 35 ..................................... GACAATAATAGTATCATACATATCTGCATTAAAAT 128059 37 100.0 36 ..................................... ATTTGTTTTCAAATGATTATGAATTTGAAAGGAAGG 127986 37 100.0 37 ..................................... AAGTCTAGATTGGTTAGTACAGGCTAAGGCGAATGGA 127912 37 100.0 34 ..................................... GAGTTTACTAAACTTCAGGAAGAGGTAGTAGAAA 127841 37 100.0 41 ..................................... CCAAGTTTCTTTCCCTTGAATGGTTGACAGGTGTATCTAAA 127763 37 100.0 36 ..................................... TTACTGGCATTTTAGAAAAGGTAAAACTTTTTACAA 127690 37 100.0 35 ..................................... GCCGCAGAGGGCTGTGCTGCCATCTTCACAAGCAA 127618 37 100.0 39 ..................................... AGGGTGACAGTAGTACTGCAAAACTGTCGCTAGGTTGTT 127542 37 100.0 38 ..................................... CACATTCCCAGATTGATTTTCTTGGCGTGGCAATTAGG 127467 37 100.0 35 ..................................... CTGTCTGCTCGCCTGGATATTATTTTAAATGTATA 127395 37 100.0 35 ..................................... GACGGGATATCCACCCCTGTTCCACAAGATGACAT 127323 37 100.0 39 ..................................... TCAGTAATCTTCTTGCCTCAGATACTACAGCCAGCAGCA 127247 37 100.0 37 ..................................... GAATCCGAAATTTCATTAGCATGTGAAATCTGTGAAA 127173 37 100.0 41 ..................................... AAAAAACGCAGGTGCAAGGTAGATGTCGGGAGCCTCGCCTG 127095 37 100.0 33 ..................................... TTGGGCAATCTAGTTCACTTTATTTTGATTCAA 127025 37 100.0 36 ..................................... ACAAAAAGCAGATTTTCTCGAAAATGCTTGACATGT 126952 37 100.0 38 ..................................... GATTTCCTTAAACCATAATCTTCACCACCCACCTTGGC 126877 37 100.0 36 ..................................... TCCATTTCAACATACTTCTTAAATCGACATCGAACT 126804 37 100.0 40 ..................................... CTGATAACATTTGTTTGAGGCGACGTGAGAGAGAACCTAC 126727 37 100.0 35 ..................................... AAGCCATAGCCAAGTCAATCAGATCTCAATTAGAA 126655 37 94.6 35 .A..................................T CGGTGTGGAAGCGCCAAAGTATTAACGACTACAAG 126583 37 100.0 39 ..................................... CAGGTAGATACTACGGCGATCGCTTTTGGAAGCACTGCA 126507 37 100.0 35 ..................................... ACAATCCAAAATTTCAGCGACTTTTACTAACTTCG 126435 37 100.0 34 ..................................... CTTTTTGCATAGCTTGCCTCCAAATAACTCTATT 126364 37 100.0 38 ..................................... GAAAAGGGAGTTTCTCACTGGAAACGAAGAGATTTCTA 126289 37 100.0 34 ..................................... TCAATAACAGGATTAGCTAGATTGTGTGGTGTAG 126218 37 100.0 34 ..................................... GATGCCTAACTACAGCAGCGAAGGATTATTTGAA 126147 37 100.0 38 ..................................... AAGAAATGCTTCCCAATAGCAAACCTGTAATCATCAAA 126072 37 100.0 34 ..................................... ACTAAGTACACCTTCAGGTACTTCTTTAATTGGA 126001 37 100.0 35 ..................................... AAATTGAGAGCTTGCATACTGCGATCGCACTTCTA 125929 37 100.0 35 ..................................... AAATTGAGAGCTTGCATACTGCGATCGCACTTCTA 125857 37 100.0 34 ..................................... AAAATCTAAACCCGTAGATTGTCTGTAAGTTAAT 125786 37 100.0 35 ..................................... GAAAGTTTTCTCTACCCGTGCAATTACATCTTGCA 125714 37 100.0 34 ..................................... TCGTTTGGCTAAAAAGGTATTACAAACAATGATT 125643 37 100.0 35 ..................................... GAATGCCAATGCTGTACTCTCACCCCGACAATGTA 125571 37 100.0 35 ..................................... TCTCCAGTAGCCCTGTCGTAGTAAACCTTGCGAAT 125499 37 100.0 34 ..................................... GCTACCCCAGGAATGCTGATTGTAGGAATATCAA 125428 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================ ================== 139 37 99.7 36 TTTTCAATTACTCAAAATCCCTATTAGGGATTGAAAC # Left flank : AAAGGGGAACGAAAGAGGTTCTTATTAAAACCGCTTTTAGGGAGTTTGCTTGTGCGATCACAGACTTTGAAGACTCTATCAAATAACATCATCAGCACTTACTATATAGAGCGACGCTTGGGGGGAATCGTAAGTGCGTAGTTTACTGCCGTAGGCATCGCGTCTCAGCTATCTGAACTAATTGAGTATGATCTCGATAGTAGAATTTCTCTTGGCAAAGTGGAAAATATTGATAGTGAGCAGCTTTACAAGCCGACTAGTTTCTATGCCAAGTGCGCGGATGGGTAGGTGTTAATCAAGGGGTGACTATAAAAATGGCTGAATTGCCGTCTATGCAAGATTTTGAGGGGAATAAAATTTCTAAACCATCCGCGCACCTTACCTGGACTGGTTTTCAGCGATTTGCATCTAGCCAAATTACAATTCCTCATGTTATGATTTTTAAGTCCGCGCAACAGAACCTTGAAAACCAAATAAGACAAGGCTTTCAGACGCCTGCT # Right flank : ATGAAGCGGCTAGATTAGTCGTATTAACCTGTAAACTGGATAGTGCCGGCGCTTCCAGTATGTAACAGGAAAAAATGTAAGTAATTCGAGCGCATTTTTAGATCGGAGAAAAGAATATGTCTAACGTGAGCATTGCAAAAGGTAGCTGTTTGTGTGGAGCGGTAAGCGTGTCTACAACCAGTATGAGTAATCAGGTGGGAGCGTGTCATTGTAGTATGTGCCGCAACTGGGGTGGAGGGCCTTTGTTAGTAGTTGAGTGTGAAAGTGATGCTAGCTTCTCTGGCGAAGAAAATATTGGAGTTTATCAATCTTCAGAATGGGCAGAGCGTGGATTCTGTACTAAGTGTGGTAGCCATCTATTTTACAAATTGAAACAAAATAACCAGTACTACATACCAGTGGGGATTTTTGATAATGATAAAGGTCTTGTTTTCGAGCATCAGGTTTTTATCGACGAAAAACCAGAATACTACTCTTTTGCCAATGAAACTAAAAACATG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTCAATTACTCAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 29525-25461 **** Predicted by CRISPRDetect 2.4 *** >NZ_VJXY01000010.1 Komarekiella sp. 'clone 1' NODE_10_length_188670_cov_209.135444, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================== ================== 29524 36 100.0 37 .................................... CTCCTTTCTCGAAAAGGTCATGTTCGAGCGCAAAGTG 29451 36 100.0 37 .................................... ATTCAACCACTTTTAATAATTCCAAAACTAGCAACTT 29378 36 100.0 37 .................................... TTAGTTTTCATTTACTACACTCTCTTAGTAATGATGT 29305 36 100.0 36 .................................... CTTAGTTGAGCATCATTCAAATCTTGACTTTCGTCA 29233 36 100.0 40 .................................... CTCCCGCCCGCCGCCGCCAGACCGCCGACCCTACCGCTCG 29157 36 100.0 41 .................................... TACCCCGTTTTGCAGGTATTGATTGCTGCGGTCATTTGAGT 29080 36 100.0 45 .................................... TTCTTGTGGAATTGCACGATGTAACAACTTAGAGTTAAATTTGAT 28999 36 100.0 36 .................................... GGCACATCCTTAGATTTTTGATATCTTACTATATCC 28927 36 100.0 43 .................................... TTAAAATTAGCTAATTCCCATTCCTGGCATTTTAAAACCTGAA 28848 36 100.0 36 .................................... TTGAAGATGGATTAAAAGGAACCATGGTTGTGTACA 28776 36 100.0 35 .................................... CAGAAATACCTCGCCACTGGGCGCTTGCTTGACGG 28705 36 97.2 40 C................................... ATTTCCGAAGAAAGAACTGTTTTTAAATTTCACATAACAA 28629 36 97.2 43 .........T.......................... AATTCTGGTCTAGATTCGGCGGCTGCTTCAGGTATTATTAAAA 28550 36 100.0 36 .................................... GAAGTATGATTTATCCACTGGAACTCCGTTTTGTGT 28478 36 100.0 34 .................................... CATTGAACGCGCCCCTACGTTCCACCTGGGCAAA 28408 36 100.0 38 .................................... CCAACGTGTTTCAAGCTGCACATCTTTTTTCAAACGTA 28334 36 100.0 39 .................................... AATTCCCTGAGTGCTGCTGACCAAGCAAGGGCATCGAGA 28259 36 100.0 36 .................................... GCTATAGCCGATGTACGATCGCCTCCTTTTGCTAGG 28187 36 100.0 40 .................................... GTCACAGGTAGTACCGCTAGAGCAACGCTATGGTGTACAG 28111 36 100.0 36 .................................... CAGTAATTCATTATTTGGCATTTATTTAATAGCTTA 28039 36 100.0 38 .................................... AATTTTCCTTAAGTTGTTCGATGCTAATGTATTCAATA 27965 36 100.0 35 .................................... TGTGGATATTGGTAAGCGCTAATTACTCTTGCCTT 27894 36 100.0 35 .................................... ATAAGTAAAGCACCACTGCAAACAGAGGACAAAAG 27823 36 100.0 39 .................................... TACCTGCGCCTGGACTATAGCTACCATCACTAAAGTCCC 27748 36 100.0 37 .................................... CTAACTTCCTTTGTTAAAACTCCTCTCCAAGGGTTGT 27675 36 100.0 35 .................................... TCATTTGTTGAATGCTTGGCTGTGTTTCACGCACT 27604 36 100.0 42 .................................... GTGGAGACGTATTCCTGTTTTAGACCAATCTTCGTCTACCCC 27526 36 100.0 36 .................................... CCTAACTGGCAGCCCAAGCCTTCACCCGGCGCTAGT 27454 36 100.0 39 .................................... TGTCCACGCTCGCTTCTCTTGGCTTACTGTCTCCACGAA 27379 36 100.0 43 .................................... TAATATAAGTAGACATTTGATAGTTTACTTATTTAAGAAGTTT 27300 36 100.0 44 .................................... TACATTAACTTATAAAGAGTAATTCAATTAAATTGCTTGATTAG 27220 36 100.0 46 .................................... TCTGCCTGTCACTGGTATGATGTTGTTCGCTGGCAGTCGGCTTTTG 27138 36 100.0 36 .................................... TAACCACAGTAATCCCTTCAATAACCTCAATAGTAG 27066 36 100.0 43 .................................... TTAGCTAAACCAACCTTACTCACTTTTGAGGAGATTATATAAA 26987 36 100.0 36 .................................... TTTGGTTGATAACTTGCTATCTCCTTCTTAATTCTA 26915 36 100.0 40 .................................... TAGACAGAAGTTTTGTACATAGAGTCTAGAACAATCTTGC 26839 36 100.0 41 .................................... ACCAAGCACCCATTCTTTTGGTTGTTTCCAAGAATCAGATT 26762 36 100.0 37 .................................... AAAACTTAAGCCAGCTTTCCCAATCCCCAGTATCCCT 26689 36 100.0 36 .................................... TATTACCATTAAGATAACAACACTTTCGGGTATGCT 26617 36 100.0 41 .................................... CTAATCCTTTGATTCCTTTTACAGAAGGTGTATTGTCTACG 26540 36 100.0 40 .................................... TTCTAGCCTGCATGGGTCTGTTTAACATTTTGGTTCCTTT 26464 36 100.0 37 .................................... AACACCACACCAGATGGATAAACCTCCTTATATTTGT 26391 36 100.0 38 .................................... TTCACTAGTTAACCTTTAATCAGTTAGTAGTGAATCCC 26317 36 100.0 41 .................................... TTACCCAACATCTTCTTGAAATGGGCTATTACCAAGTTAAC 26240 36 100.0 44 .................................... TCTTCACTTCTGCTACTCAGTCCACTGGTTCAGCTCCAGTAGTA 26160 36 100.0 38 .................................... TCAGCTCTAAGTTTTCTTTTTTTAGCTCAGCTATTCTG 26086 36 100.0 35 .................................... TCTACAAAGCTATCTTGAAATGCACCGACCCTTAG 26015 36 100.0 39 .................................... TAGCCCTGTTAATAGTTACTGTCATTATACCAAAGCCCT 25940 36 100.0 38 .................................... GACAGTTAAGTTTGGAGATTCTATTCCAAATGATGAAG 25866 36 100.0 37 .................................... ATAGTAGGGAACCTCTTCAGACTTTAAGAAACCGAGT 25793 36 100.0 41 .................................... CAACTGTTTTAATACATGGTATATACTCTAAAGATTAAGGA 25716 36 100.0 38 .................................... TTTTCTCCCATTCACTAGGAGAAATTATGTGACCTACC 25642 36 100.0 35 .................................... ACTTCATTATTCATGAAGCAATACTCTAAAGCTAA 25571 36 100.0 35 .................................... CCGCCGTCGCCTCGAAAACCGCCCCATCCGAAGCT 25500 35 86.1 0 .....................G...C....C-..T. | T,CCGC [25470,25476] ========== ====== ====== ====== ==================================== ============================================== ================== 55 36 99.6 39 GTCTCCACTCGCTGGAGAAACTAATTGAATGGAAAC # Left flank : CCTTTATCAGCCTTACCAGATTCGCTAAGTTTATATGTTTTTGTACGTGGTGGCTTATGATATTCCTTGTGATAAACGCCGCAAAAAAATATCGGATTTATTGGAAGGCTATGGTCAACGAGTTCAATATTCGGTGTTTGAATGTCGATTATCTAGTGATAAATATAAAGAACTGCGTCGCCGGCTTCAGAAAATAGTCAAGTTGGCTGAAGATAGTCTGCGGTTTTACCCTCTGTCACGTCATACTTTAGAACAGGTGGAATGTTGGGGTATAGGGCCACCTGTTACAGAACTCCCAGGTTCGCTAATTATTTAGGTGGTTGCGAGGGGGTCTGGAAACCTCTGAAATGCTCATTCTATCATTTACCCCCTCGCCGTCCTGTTTTGTAAGGGTTTCAAGGATTTTTTTCACTTATGTTTTTGATTTTGCAGTCTCAATTTCTGACCCCCTTGCAAACCTCCTCTAGACTCCCTGTTAGATAAGGGTTTAAAATCAAGGG # Right flank : TTAGGTTTTGGTTTCTTTTTCTTTTCTGGCTCGTTGTTTTGGGTCAATATCTCCTCCTCTAGAAGTTGCGGCTTTGGGCGTGATCGCTTGATACTTTGTATTGATTATACGTTACAAGTATTGTAATAGGCTATATATCCCTAAAAAACATTTAACCCGCCTGATGAGGGGCGGGTTTTTCTTTATTGAGTAAATTTAATAACTGAACGTGAGTTTGCCTGAGAGATTCGTTCTCCTCTCTCAGGCGGCCGATTCCCCCAATAGTTGTGCGTTCTCAATACCTACTTTCTTCTCGACTTCTTCTAGACGCTTAACAAACTCCGCTAAATTCTGCGGATTCGGGATGGACTCTTCCTTGTTCAAGTAATCTTCAATAAATTGTTTAAGAGCGCCCGTAACTGTCTTTCCCTCTTCTCCTAGTTTTTTGCTAAAAGCATCCTTGGTTTTGGGGTCTATCTCAATCGAGATAAAAGTCCTTTGTCTTTTGGTCGTCATAATAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCACTCGCTGGAGAAACTAATTGAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.50,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 1 5347-8082 **** Predicted by CRISPRDetect 2.4 *** >NZ_VJXY01000027.1 Komarekiella sp. 'clone 1' NODE_27_length_112969_cov_212.572907, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 5347 37 100.0 35 ..................................... AAGTGCATATTTAAGCTGAATAAAAGATTTACCGG 5419 37 100.0 37 ..................................... CTTTTTACTTCAGCTTGGTATGAGGCTCAAGATTATA 5493 37 100.0 32 ..................................... TGATATTGAGAAGCAATTTCAGAAGAAGTCAG 5562 37 100.0 36 ..................................... TTACACCAGACAAATCGCCATTACCTTGGACGTCTT 5635 37 100.0 35 ..................................... GTTTGATACCATTCGCCATAATTATCAACTCTTTC 5707 37 100.0 37 ..................................... CAAAGCTGTCCGCCTGAAACTATGAGTACTACAGCCA 5781 37 100.0 37 ..................................... TTCATTAACCCAGAAATCAGCTTCCTGAATCCCAGGA 5855 37 100.0 40 ..................................... TTCTGATTATTGTACCAACTCCGTTGGCTCAGAAAATTCA 5932 37 100.0 39 ..................................... AGCTCTTGAATTGCTAAGTAGCAGTAAGTTACAGCGCAA 6008 37 100.0 35 ..................................... ACATTTTCCATCGCTGGCTTTAAAGGTTCAGGTAT 6080 37 100.0 35 ..................................... CTAGTCATGCCCAGATTGCTAGACACGTCAGTAAA 6152 37 100.0 34 ..................................... AGTTAAGGGAAAATAAAAGAGCCAAACTAGTTAA 6223 37 100.0 35 ..................................... AATACGTGTTGAAACTATACTATTAACGCCAAAGC 6295 37 100.0 38 ..................................... AAAAAGCAACTATCGAAACAACAGAAACAAAGAAAATT 6370 37 100.0 33 ..................................... GCGCTGACGATTGCTGCGAGGCGATCGCCCAGG 6440 37 100.0 34 ..................................... ACACCAGCCGCAATTGTTCCTAAAGAAGTAACCA 6511 37 100.0 34 ..................................... ATTTACAAAGTTAGAAGCTAATATATAAGTAATC 6582 37 100.0 40 ..................................... TTTGCATTCATTTTCAATTTGGCTTTCAAAATAGACTGTT 6659 37 100.0 36 ..................................... GCCATCTGGTCAGGTTTTAGGAACAACATTTAATGG 6732 37 100.0 36 ..................................... CAGGGGTGGAAGGAAGAAGGGATATTAATAAAGTGG 6805 37 100.0 36 ..................................... TTTACTGACAAACAATCTGCTATCGCTAATGTGAAG 6878 37 100.0 35 ..................................... TAAAATGGGTTTGCTCAAAAAGGTAGTGTGAGAAA 6950 37 100.0 40 ..................................... TACCAAACGATACACTTATAGAAATTATATATCCTGGAGG 7027 37 97.3 35 ....A................................ AAACGTGCTGTAGTTAGTACTGTAAATGGAATAGG 7099 37 100.0 37 ..................................... AAATTTTCAATTTCTGCATAATCTTCAGGAGATGTTA 7173 37 100.0 36 ..................................... TTCTTACTTCATATATAATACTCATTTTATGAAAGT 7246 37 100.0 36 ..................................... ATTACAAAAGAAGTAATTCCATTGCACTATGGTAAT 7319 37 100.0 37 ..................................... TTATGGGTTATGAGTATACCATTATCGGTAATCCGTT 7393 37 100.0 37 ..................................... ATCTTTAACATAGACATCCGTATATGATGTTATTCTT 7467 37 100.0 35 ..................................... GATGATATTTGTGATCATTATCAAATACCTAAATT 7539 37 100.0 35 ..................................... ACCGGAAACTCTGAAACAACCCCCTTAGATTTAGA 7611 37 100.0 37 ..................................... TAAGGATAATCCAGATAACTTAGAGCAAGTTACTAAG 7685 37 100.0 34 ..................................... CCATTAACTACAAGTTGAGGTAAAGTCACTGGGA 7756 37 100.0 40 ..................................... ACAGGCTTTTTGGACAACGGGCGACAAATGGCGGTGTATG 7833 37 100.0 34 ..................................... AAACCTAACTACGCTTCGCACCCTGCACATGATT 7904 37 100.0 34 ..................................... TTCATTTTGAGCGATCGCCAACGTATTCGGCGCA 7975 37 100.0 34 ..................................... CTCCAACATATATTGTTTCTATCTGTTTATGGTC 8046 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 38 37 99.9 36 ATTCCAATTACTTAAAATCCCTATTAGGGATTGAAAC # Left flank : CTTTGTATAAGCAAGCCCCAAAAGCCTTTGTAGAAGGGGAAGATATGACATCCTGGTTGTACTTTCAAAAGCACTTTCAGGCTTATTTGGCTGGCGAAACCTTCCCGCTTCCACAACCAGAGGAGGAGTAATTTAGCTTCAAATCAACATTTAACTTTTGACTGGAGAGATATGGTAATCTCTCCAAGCTGCGATCGCTTATACTTCAGTCAAGGTAGTAAGCGATCGCTATAATGTTTGCGATCATTGAATAAGACCAGTTTTTGTATCCAGTGCGCGGATGGGTAGGTGTTGGTAAAAAGATGATTGAAAAAACGGCTGAATCTCTCTGTATGCAAGAATTTGAAGACAGTAGCATCTTTAAATCATCCGCGCACCTTATCAGCACTGGCTTTTAGCCATTTGCATCTAGCCAAATTACAACTGCTTATGTTATGATTTCTCTATTCGCGCAACAGAACCTTGAAAACCAAATAACACAAGGCTTTCAGCCTCCAGCG # Right flank : CTGATCCGTTTTCACCCAGCCTCTAAAAGTATTACAAGCACACTCTACGAATTCTTCTCTTCTAGACGCTTCGCGTTGGCGTTCTTGGCGTCTTAGCGGTTCGATACATTAAGCTTTTTAGCAGTTTTTGCGTAAGTTCTGTTTGCATCTTTGCGACGCCAATTGATTCAACGAGGAGAACCCCAATGGCTCACCTACCCTGCGGGAAGCTGCTCCGCGTCTATGCGTGCGACTAAATTCATACTCTTAATAAGCAACGCCTAGCATCAACATAGTCGAATTATATCTATCGAGACTTGACAGCGTGCGTGTAAAGCTTTCCAATAGGGTTTATCGAAGCCGTGTAGTGCTTAATTCTATATTTACGTACAAAATAAATGTGATACAAAGCTTACATAGTAAGCTTTGCAGGCAATATATTTAACTATATATTACGTATAAAAGAGATGCGATCGCACGCATCTACGGCATAAGTTTATAGCTTCAACTGAATCATAGGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCAATTACTTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : NA //