Array 1 84612-83053 **** Predicted by CRISPRDetect 2.4 *** >NZ_LVWH01000137.1 Paenibacillus sp. P3E scaffold_22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 84611 32 100.0 34 ................................ CATTGCTGAAATGGACAGGAACAAAGAATGCAGC 84545 32 100.0 34 ................................ AGGTGCCCTGGTTACATCATCTGCCTTTGCTGCA 84479 32 100.0 33 ................................ CGCAAAAACGAAGAAATAGAAATGAAGTTGGGA 84414 32 100.0 33 ................................ TATCACGGCATCAATAAATGGCTTTAACTCCTC 84349 32 100.0 37 ................................ CTCCAACCGCCCCTGCAGGTCGCCTGGAGCCTCTAAG 84280 32 100.0 33 ................................ CCCGTACACCAATGTTTCCCCATCCCGTTCCAG 84215 32 100.0 35 ................................ TATCGTCTCGAGTGTAAAAACAGCCGGCTCAAATC 84148 32 100.0 34 ................................ AGACAACTATGAGGAAGTCATGCAGGACGGCCTA 84082 32 100.0 34 ................................ ACACAACCGATAATTACAGGTCATGCCGGCAGCC G [84068] 84015 32 100.0 35 ................................ GCATTCACAGGGGCTGTCATATTATATTGCGTTTC 83948 32 100.0 35 ................................ ATCTTGCTTGATGATTTGCATGAAAATTATGTTCA 83881 32 100.0 35 ................................ ATACAGCCTGGACTCATAGGGCTAGTGTTTGCCCC 83814 32 100.0 34 ................................ TAAAGGGACAACAGCCAACACCCGCTGGGGAGGT 83748 32 100.0 36 ................................ CTTGACGAATAATTGCTGCTTGGCTGTCAATGCCAG 83680 32 100.0 33 ................................ TGATGGGTGCTTTCGCTATTTTCGCACATTAAG 83615 32 100.0 33 ................................ TCCTAAATGCTCAACTGTCCATAGATTAGTAGC 83550 32 96.9 33 .............C.................. GCCTTTTGTCGCGTAGTCTGTTCGCGTAATTCC 83485 32 90.6 33 ....T........C..A............... TCCACACCACCATTAAGGAGCGAGTCGTTCACC 83420 32 96.9 33 .............C.................. ACGCCCAGCTGCTTCAGCGGCTCGGTCTCTCCG 83355 32 96.9 36 .............C.................. CGGAGACGCACCAACGGTGCGCGACTGGACCGGCTC 83287 32 93.8 36 ..T..........C.................. GCTAACCCGGTGAACTGATTCATATATCGTTCCATC 83219 32 96.9 35 .............C.................. GTCATGAGTATGAACTGCTCAGAAATGAAGGGCTC 83152 32 100.0 36 ................................ ATCAGTATGTACCGATTGATCGTATGGCCTGGGCTG 83084 32 93.8 0 ............A..................C | ========== ====== ====== ====== ================================ ===================================== ================== 24 32 98.6 34 GTCGCTCCTTACGTAGGAGCGTGGATTGAAAT # Left flank : ACCTGGATGAGTATCCTCCATTCTTATGGAAGTAGGTGTATAAGCTGTTGGTGCTGATTACTTACGATGTTAGTACCTTAAGTAGTGCAGGTCAGAGCCGGTTGCGCAAGGTATCTAAAACATGCCAAAATTATGGGCAGCGGGTCCAAAATTCTGTTTTTGAATGTATTGTGGATGCAACACAATTTGCCGAGTTGAAAATAAAGTTAAAGGCCATCATTGATCAAGATGAAGATAGCCTAAGGTTTTACCAACTCGGCAATAATCATAAGAATAAAGTTGAACATGTGGGTATAAAGAAATCCATTGACCTGGAAGGTCCACTGATTTTGTAGTGCGAATGTATAGTGTACATGAAATCCCCGGATCATTCGCACTGATTTTATTACATTATTTTCTAAAAAAATAAGCCGAATCCTAATTAATTGCTTATTTTTTTGAGATTTAAGCAGTTTTTAACAATAAAAGTATTTTCATCCTTTATTTGGGCTGAAATCGCT # Right flank : ATCGTATATAGCACTGAACTTTGATTTTCACCGGCCAAGTATCAAAAATACCGCACATCATGGTAAAATACTATGACTAGTACAGCAACAGTCCAAACTGAATTAGCAGGTGACCGTGTTGAGATTACGAGAATTCATGAACCCTTCCGATTCCTCGGCCTATCGGCAGGCGAAGTGGATCAAACGTTTTTTGCAGACTTATTGGCTTGTGATTTCCCTGCATTTTTTGGCCCAGCTAGGGGCATTTTGGTTTCTGCCGTATGAGAGAGGGGCGCATGAGTTTTATTTTGAGGTGCTGCTGTATCCGACTCTGCTGATGGCGGCGGTGGTGATCATAGCCCAATTGATTGATTACAGCGCCTCTAAGTATTCGTTCTACTCTCTTTTTATGGCTGGCACGATTATTGCCATGATCATCATCCATCTGAACATGGATATCCGTATTATTGGAGCACTTATGCTGCTGCCTATTTTCGCTTCGGCGATTTTTTACAGGCTTG # Questionable array : NO Score: 9.19 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTTACGTAGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTTACGTAGGTGCGTGGATTTAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.80,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [9-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 97637-99196 **** Predicted by CRISPRDetect 2.4 *** >NZ_LVWH01000092.1 Paenibacillus sp. P3E scaffold_18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 97637 32 96.9 36 ..............G................. ACAGTGCGTGATGAAAAGATTGTGTTGATCACCTGC 97705 32 100.0 36 ................................ GTAATTACTAAGTCGTCAAAAAGAATTCTTTGTATC 97773 32 100.0 35 ................................ ATCCTCTTTTTGTTGCTTGTCAACTATGGTATTTA 97840 32 100.0 36 ................................ TGCGCCTTAACGAGATCGTCCGCGAGCGCTATAGAC 97908 32 100.0 34 ................................ ATACGCAAGTTAACGTCAATTAAGCGGCTGCCTG 97974 32 100.0 35 ................................ AAAACCGTCTAACCAGCACCGTCACAGACGAGCTA 98041 32 100.0 34 ................................ GAAAATGTAGACAACGGAAATGGACAGATGGAAC 98107 32 96.9 33 ...................T............ AATACGGCAGCGAGTACATAGCATAAAATCGAC 98172 32 100.0 36 ................................ CTTCCTGCTCATAAAGTATTTTGCATCTGCAATACT 98240 32 100.0 35 ................................ ATATCCATGCTCATCGTTTATCTCTCCTTATAGGG 98307 32 100.0 35 ................................ ATGCTGATGCTCAACCCAAATGTATGCTTTGCATG 98374 32 100.0 34 ................................ CGACATGGGTTGTCACACGCTGCGGAAAACATTC 98440 32 100.0 34 ................................ CAAACAGCCTGCTGAGTCGCCGGGAAGGTCAGTC 98506 32 100.0 33 ................................ GAATTCAGTCTGATCTTTAGGATTTACAGTCTT 98571 32 100.0 34 ................................ CTTCCGGTCCGTGGGGTTAGGACTGGTGAAGCAT 98637 32 100.0 34 ................................ TCAAGGCGCAGAAACAGAACGTGGATCAGCTAAG 98703 32 100.0 37 ................................ CAGTGAGGCCCGAGCCAATCGAAATAACCAAAGTAAT 98772 32 100.0 33 ................................ ATAGGAGGGATTCGAGTGGCAGAAGCAAAAACA 98837 31 96.9 36 .....-.......................... CTACCACTCTACTGTATTAGATGCAGAGGGCTTAAT 98904 32 100.0 35 ................................ CATGCAGACCTGCGTGTTAGTGTTGGGTGCTACCA 98971 32 93.8 34 ....................A.A......... TGAAGGCGACTACAACCGCAACGGGTACAACTAC 99037 32 96.9 34 ..........G..................... TTACCGGATACGCCGGCCTTCTCTCCGTAGTATT 99103 32 96.9 29 .............................C.. CAGTTAACGGTATCTCCAGTACCAGTATC 99164 32 90.6 0 ...........T..T.........G....... | C [99194] ========== ====== ====== ====== ================================ ===================================== ================== 24 32 98.7 34 GTCGCTCCTCACGTAGGAGCGTGGATTGAAAT # Left flank : CTGGTGTAGTTTTATCGATATTTCTTGGGTCTTACGGTATTCTAGTGCTGCTCGCAGTCGCTTTTGGCATGGTGACGAGCACGTATGTCAGGACCAAAGAGATTCATTCGGATCTCCAAATCATCAAGGAAAAGCTCGGAATCACGGATGAAGGTGAAACGGGCCTGAGCAATGAAGAGATAGAGGCGGAGCTGGAGCGTGAACTTTTGAAAGATCATTGAAAAACGGTAAGTTAAGGGATAGAAAGTGTAGTAATTAGCAAAAAGGTCTGCGTACTCGATGAGAAATGGCGTACAATAGACGATGTATAGTTAATTTTGAAAATGAATGCGTAGCCTGTGGTGCGAATGTATAGTACCCATGAAATCCCCGGGTCCTTCGCACCAGATTTATTACATTATTTGCATGATTTATGGATGAGTTTAGCGATTAATTTAAGAGTTAAGTGATTTTTAGGCTTTATTAATGTTTTTTTATCCCTTTTTTAGGCGAAAATCGCT # Right flank : TTAAATAAAACCAGTATATATGTAAACCCCAAAACCCCAAAACGGTTAAAAGCCCACAACTTACTGATAAGGTGTGGGCTTTTAGACGTTTTGTTGGCTTTGCCGAAATTTGTAAAGTAATGTTCAGAAGTGTTTCAAAAAATGTCGTATTTTTCCATGAGGGGATGATATGATGAGGGAAATAGAGTTTCTAAAATGTAAAGTTATGCGTCCCATAACAAATAAGCTGTCGTTTGAATCAGTTGATTATAAAGGAGCCATTCCTGTAATGAATTAATTTGAGGTTTGAATGAAAAAAGCGCCAGCTGTATACTGGGAAACGTTCCGTCCAGAGAACAAATTCCAGCGCAGGAGGCACTCAACATGAAGTATAAACAATCGAAGAAACAGAATCAACGGATTATGAGAATTTCCGACAAGACCCTTGTCGTAGGCGCAGACATCGCTAAGGAAACCCATGTGGCCCGAGCCATTGACTTTCGGGGAATTGAACTGGGGAA # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCACGTAGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.10,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA //