Array 1 60106-59793 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCXS01000111.1 Vibrio breoganii strain 10N.261.52.F10 10N.261.52.F10_contig_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================= ================== 60105 37 100.0 31 ..................................... GTTGGCAGCAAGCCAACGCTGAAGCCTTTGT 60037 37 100.0 32 ..................................... GTCTGCTCTCGAGCAAGACCTGACCATCAACA 59968 37 100.0 33 ..................................... TTCATCAGTTTCCACTGTCACTTCTTTCATTAA 59898 37 100.0 32 ..................................... AGATCTCTACCCCAACCCACAAACGACATTGC 59829 37 94.6 0 ................................T...C | ========== ====== ====== ====== ===================================== ================================= ================== 5 37 98.9 32 GTCTGAAACTCGCCCTGTTCTTAAAGGGATTAAGACA # Left flank : TTGAACTAGGACGACTCGATTTATACGACCAAACTATTAGTTCAGAGAAAGCTGTGGAGCTTTATTTGATGATGTTTAAGGCGCTCTTGATTCTCTTTGGGTTTTACTTATTTTCAATATGCCTTGAACGTTTGGCGATTCGCTATGCCCTCTATAAATACAATCAAGTGAGGCAGGAAAATGAAAATCTCACCAATTAAACCTATCCCTAATCTGTCCGATATTGATGTGACCGTGACCACAGCTGGGCTTATTTTAACCTAAGGAATAAGCCCCCAAGGCACCAAAATATTCAATGTGATAATCAAGTTTCGGCAAGGTTCACAAATTCAGTGAACTACAGCTCAAAAAGCATTTAAAACAGTAGCTTAAAGCAGGATTATTGAGTTAAGATACCCCACGGTCAAGCAACGAAATAATCGTCAAGTTTATGAATTTGCAAATCTCCGATAAGCCTAGTTTTAATCTATTGATTTATAAGGTTTTTTAGGTGGATTGCT # Right flank : AATCACCTTTAATACCCACAACAAGCGAACGTCTGAAATTCGCTCTGTTTTTATCCACTCCTCTATTCTGACCTTATGGCTTATGGCTACAAATGTGATCTCCCCCTAAGTCAAAAAGTAAAAAGTTATCAGCATAAAAAAAGCCGACTTTTAAAGTCGGCCTTAGTGGCAAGCACTTGGTTAATTTACCTATACCTAAAGGTAATATTGGATGATTTTATCTTCAGCCCCTTCGTCTGAATGGGTTTCTTTAGTTCTTTAATCTTAATGTTGTTTACTTCCTGGATTTTATAGTGCCCACCAAACCTACTACCTAACTCACCTTCGATAGCGCCATTCACTTCAGAGAGTAACCTTACCCACAGACTGTACTGCTTCTTATGGACCACCGACTGGCTTGTTAAACCGTCAATATCGAAAAGGTCTTGTGCCCCTTTTCTTTGAAATAGGAATATATCACCTTGATACCGCTCGTCGATTAAATCCAGCAAATGATCCTC # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAACTCGCCCTGTTCTTAAAGGGATTAAGACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 2 62522-62138 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCXS01000111.1 Vibrio breoganii strain 10N.261.52.F10 10N.261.52.F10_contig_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================== ================== 62521 36 100.0 34 .................................... CTCAAATTCCTCGGGCGATACTGTGCTTATTTCA 62451 36 100.0 34 .................................... CTACCATACCCGTCAAGGTTTCGGCCCTCACCCT 62381 36 100.0 33 .................................... CTGACTAAAAAAGTTAACCCCAGAACCGTTAGT 62312 36 100.0 33 .................................... ACTAGATGGCTTGCAATGAATGCCGCCATCATG 62243 36 100.0 34 .................................... GCCCCCAACAACCAACAACCTACGAAGAAAAATA 62173 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== ================================== ================== 6 36 99.5 34 GTCTGAAACTCGCCCTGTTCTTAAAGGGATTATGAC # Left flank : GGATCTTGTGTTACGACATTTGCGATGCAAAGCGCTTGAAAAAAATGCATCGCCTCGCTTGTGAATACGGAGTGCCTATGCAGTACTCGGTATTCCTAATCCAACTAAGCCAAGCGCAACTAACACAATTGGCAAAGGATATCGAAAACACCATAGACAATAAGGAGGACAACGTGAAGATTTACCCGATCAAACATATACCCAAAGAATATCTTTCCGATATTGGTGTGACCGTGACTACAGATGGGCTTATTCTGACCTAAACAACCAAGGCACCATTATATTCAATGTGGTATCAAGAGCAGGTTAATTAGGCAAGGTTCACAAATTCAGTGAACTACCGCTCAAAAATCATTAAAAACAGTAGCTTAAAGCAGGATCATTGAGTTAAGCTACCCCACGGTCAAGCAACGAAATAATCGTCAAGTTTATGAATTTGCAAATCTCCGATAAGCCTAGTTTTAATCTATTGATTTATAAGGTTTTTTAGGGGGCTTGCT # Right flank : TTTATGACCCTAGGCACTAGAACCTAGAACCTAGAACCTAGGTTCCCCCCTTCTCAATCAAAGAATAAACCCATTAAGATAAGGCAATGCACTCCCTATCGTTATGCCAAAGACCAAGCCCCATATCACGCGAGTATTCTTCTCACCGTACATGTGTTGAATTTGGCTTTGAACTGCCTTGAGTTGGTGGTGGTGTTCGCACTTTTGCTGTTGCATCTCCTCTATCAGCCTGTCGCGTGCTTTTAGCTCATATCGCAACGCCGAAATAGAACTGCTACAGCGACACTCTTTGGTGTACTGCTTTATGATTTGGAGTTGCGCATAACTTTCACAACCCTTGCCTGCTAGTACCTTATCTTGGGCAATCTTAGTCAACTTAAACAATTCATCGCTAGGCATTGAACCTTTATCCGGATGAAGCCTATTTGCCAAAAGCCTGTAGCTTCTTTTTATCTCCAGTTTTGTTGACGCATCGCTTGTGCCTAGAATTTGATGAAAAG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAACTCGCCCTGTTCTTAAAGGGATTATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //