Array 1 48615-52280 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABUJY010000011.1 Desemzia incerta strain L243 L243_ctg0011, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 48615 36 100.0 30 .................................... AAGAACGTTCATATTTTCCAAGTGTTTCTG 48681 36 100.0 30 .................................... TATCAGGTGTTGTTGAAAAATTAGGGGAAT 48747 36 100.0 30 .................................... GAACTGTATACCTTATTTGATTTAGACCCT 48813 36 100.0 30 .................................... GCAATATAATAGACACAGACATTACACTTA 48879 36 100.0 30 .................................... TTGAATTTTTCTACCTCTTCGGCCGCACCT 48945 36 100.0 30 .................................... CGTATGTATTTCAATATTGCTGAACGCATT 49011 36 100.0 30 .................................... AACCAAAAGGAGAATGATGTAAATGCCAGT 49077 36 100.0 30 .................................... TTAGAATGATAGATAAAAAGCAGGCAATAG 49143 36 100.0 30 .................................... CACCTCCAGCACCTGTATCAAGCGTTTCAG 49209 36 100.0 30 .................................... AGGGTAACGGCTAGAAACTTACGCAGATTA 49275 36 100.0 30 .................................... TAAGAACTGAAGAAGGAATCGTTCCGGCTG 49341 36 100.0 30 .................................... AAAGCAGGTATCTTAAAACGAATCGTGATT 49407 36 100.0 30 .................................... TCTGAGTTGCTAAACGTTCGTTCTGCTGCA 49473 36 100.0 30 .................................... TAAAAAATGTAATGACAGCACGCGTCACGA 49539 36 100.0 30 .................................... TGTAAGAATAGTAGTAACAGCAATCGAAGC 49605 36 100.0 30 .................................... TATTTCGAAGACGAACATGTCTGGGAACGT 49671 36 100.0 30 .................................... TTTTTTCTTTTTCCTTCAGATCAATTTCCT 49737 36 100.0 30 .................................... CTGTTTTGTTAGTACCTTTTACAGTACCGT 49803 36 100.0 30 .................................... TTAATTCAATTATAAAAGTACCATAAGAGA 49869 36 100.0 30 .................................... ACTGTATTTGTGCTCGTGAAGGAAGACGCG 49935 36 100.0 30 .................................... TGTAAGAATAGTAGTAACAGCAATCGAAGC 50001 36 100.0 30 .................................... TATTTCGAAGACGAACATGTCTGGGAACGT 50067 36 100.0 30 .................................... TTTTTTCTTTTTCCTTCAGATCAATTTCCT 50133 36 100.0 30 .................................... CGTTTGTTCATACGCCTTTATTTCACTCTT 50199 36 100.0 30 .................................... TTATTGAAGAGGCGTCTTTGATCGAGGGTG 50265 36 100.0 30 .................................... ATAAACACCATCACAATGGTTCAAAACATA 50331 36 100.0 30 .................................... GTTCTATTAGTGTTATGTCTTCTTTGCTGT 50397 36 100.0 30 .................................... TTATTGAAGAGGCGTCTTTGATCGAGGGTG 50463 36 100.0 30 .................................... ATAAACACCATCACAATGGTTCAAAACATA 50529 36 100.0 30 .................................... TTAAATTCATCTCATCCACTTTTAAAGATT 50595 36 100.0 30 .................................... CGACATCTACGTCGGCTTTCGGTATGACAA 50661 36 100.0 30 .................................... ATTTTACCTTTAGAAAACGTCATGCGCGGT 50727 36 100.0 30 .................................... TGATTTTGAAAACAATGTGCTAAATGTAGA 50793 36 100.0 30 .................................... AATGATTCCGTTGGGAAAAGGTTACTCGAT 50859 36 100.0 30 .................................... CTTGCCAAGCATTTTTTTCTTGTTCAGTAC 50925 36 100.0 30 .................................... CTTCATTGGGTATTGAACGCATCTCTTTCC 50991 36 100.0 30 .................................... CTTCATTGGGTATTGAACGCATCTCTTTCC 51057 36 100.0 30 .................................... TCTACTAATTTAAGAACATCTCCAGCCTTA 51123 36 100.0 30 .................................... TCACTTTCAATAAAGGGTTCCCTTCATCGT 51189 36 100.0 30 .................................... TATGACAATAAGAACATCATTCTTCAATCA 51255 36 100.0 30 .................................... TTTCTCAAACGTCCAATAAGGACTTTCACC 51321 36 100.0 30 .................................... CGGTTGATTTTAGTAAAAACTTAGCTGCTA 51387 36 100.0 30 .................................... TATTCGTGGTAGCTTCATACGCCATATCGT 51453 36 100.0 30 .................................... CCATTTTCTTATGCAGACTCTTCAACTCTG 51519 36 100.0 30 .................................... ACAGAAGCCGCTTCTGGGATGAACGTCCTT 51585 36 100.0 30 .................................... ATAGCCATCGTGACTTTATTTTTTTGTGGT 51651 36 100.0 30 .................................... TGTGAAATGGGTCGTAGGAGAGCCAGATAT 51717 36 100.0 30 .................................... TCAAAGGTACTGATGTTGGTGGAGATTCAT 51783 36 100.0 30 .................................... ATTATTTTGTGTGCATGGTTCCGAACACAC 51849 36 100.0 30 .................................... TCTGTATTTGTGCTAGTAAAGGAAGACGCG 51915 36 100.0 30 .................................... TGGCATCAATGTTGGGATCTATGGCGGTCG 51981 36 100.0 30 .................................... TATTAAAAGTCCTTATGATTGATGCAGCAC 52047 36 100.0 30 .................................... ATGGTTTGAGAGAAGATTTGATAGACAATA 52113 36 100.0 30 .................................... GCGGGCAACACCTCACTAGTGACCCATCGC 52179 36 100.0 30 .................................... CTTTATAAGCTTCTTTTAAGCTCCAGTCTG 52245 35 77.8 0 ................-......AA...A..TA.TT | C [52268] ========== ====== ====== ====== ==================================== ============================== ================== 56 36 99.6 30 ATTTTGGTACTCTCTCAACTTTTGGTATGAAGGAAC # Left flank : ATTGTTAGTAAAACTAAAAGTAATGGAAAGAGTAACTAAACAAACAATTTTTTGTTTAGTTTACCCTGAAAACCAACTGACTAATTCTGAGTTACAACAGTTAGATGATTATTTACAATTAACTTCCAGTAGTTCTCAATATTTCATTTTATCAAACTATCCTTTTAATGCTGCTCAAAACATTCTTTATAAAAATAGGATTGTTAATATACATTCTTGTGTACTCCAAAAGGATAAACTACAGGATATTCTTCCTATTAATTGGGAAGATCACCTCTTCTCTCAAGCTTGTAATTGGTATATCAATCTTGTGGATAACTTCCAAGAAAAAACGGTTATTCTGAGTCTTCAAACTGTGCATAACTTAGAACAATTTATTTACATTTATTCACTATTTTTATTAACTGACACTCCTGTAATTGTTAATTTGACAGGAGTTCCAACATCTTTTATCAATTACTTTGATACCTTACTAGCTGATAAGGTATAATGAAATTGGC # Right flank : TACCAACTTAAGACATAGCAAATCATTGCTTTTATAACATATTTGTTATAAAATAACTCTATAGAAAATTCATAGGAGCTTATATGAAAAAATACGAAATTGAAATTTATGAAGATCGTAATGGAAATAGCCAGATTCTAGAATGGATTCAAAATTTAGACGCTCATCCTTCCAAACTCAATTCTTCTATGTTAAGAAAGTTCTATTATCAAGTTGAACGTTTAGAACATGAAGGTCCGTTTGTGGGTGAACCAATTGCCAAACAAATTGATGGAAAATTATGGGAGCTTCGTCCGGTTCCTAATAGAGTTTTTTTTGGTATTTTGGAAAATAATCAGCTGATTTTACTGCATCAGTTTCGAAAAAAATCTCAAAAAACACCGCGAAAAGAAATTGAACAGGCCAAACGCGAATATGATGATTGGATAAAAAGGAAAAGGAATGATTGAAATGAAATGGACAGAAGTAAAAAAGGATATCCAGAGTATCTCTGAAGATGA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTTGGTACTCTCTCAACTTTTGGTATGAAGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //