Array 1 337222-336657 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAGMTZ010000004.1 Enterococcus faecalis strain F106 contig00004, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                      	Spacer_Sequence              	Insertion/Deletion
==========	======	======	======	=====================================	=============================	==================
    337221	    37	 100.0	    29	.....................................	AAGGGTTTATAACAATGACCCCGATTTAC	
    337155	    37	  97.3	    29	....................................G	TCCGCCATGATGGCTAGTGTGGAATATTC	
    337089	    37	  97.3	    29	....................................G	CCCTTTATTTACACCGTTATCATCACTTT	
    337023	    37	 100.0	    29	.....................................	CACATATATTATTTTAGGTTTAATATACT	
    336957	    37	 100.0	    29	.....................................	GAGGTTTGTGTAACCAATTTACTGAAGCT	
    336891	    37	 100.0	    29	.....................................	GCACCGTCAACGTATGTTGGGAGCTCGTA	
    336825	    37	  97.3	    29	....................................A	GCAAAAGAAGAAAAGAAAACAAAAGTTGC	
    336759	    37	  97.3	    29	....................................A	TGTTGAAGTAGAGCGTGATGCAATCCTAA	
    336693	    37	 100.0	     0	.....................................	|                            	
==========	======	======	======	=====================================	=============================	==================
         9	    37	  98.8	    29	GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT	                             	       

# Left flank :   TGTATATCCTCATCAAGTAGTAAATGCTTCTTTTGACTTTCAAGAGGGACGAACAACAGAAGGTGGAGAAATGACACACATGATTGGCTTTGTCACTTCGCAAGAAAATACCTATGAAGATTTGGAGCAACTAAGCGTACCTGCTCATACATGGGCGGTTTTTCCAAATGAAGGTCCTTTCCCACAAACTTTACAAGAAACCTGGGCAAGGATATTCTCTGAATGGTTGCCTTCATCTGGTTACCAAGTTGTTGCAGCACCAGAAATTTCGTTTACGCAATATCAAGGACCAGCAGAAGCTAAGTATAGTGAAATCTGGCTCGCTGTTACAGCTACTAAATAAAGAAAACCCACCATTGAAAAATGGTGGGTTTTTCCGCCAAGAAGGAGAAAGTTTGGTATAATAAACGTGAAGAAAAAATTCAGACCTTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAATACGGAATCATGGAGAAAAAATAATTCTCCGAG
# Right flank :  CAAGAAATTGCATTAAGTTCAAAAAATTTGTTTTAGAGCCATGTTGTTAAAAAACAAACTATCACCACAAGCAATCCGTAATTTTTATCACAAGATTAGAATTTTTATCATCAAAGACGAGCTGCTTCGATTTTCGAAAACTAATCAAGTGATAAGTCAAAATGTTGATAGATTGAGATTAGTTCTTCCTTTTTTTAGGAAGGGCTTTTTTTATTGATAGAAGAAAGGGAAGAAATCTTGGGAGCACCTAAAAAAATTGTGAGAAATGCTTCTGTATTGTTTGGTTTCTGCCTCAGAAAGTTGTATACTTAGATTGGAATTATTCTATATTACATGCATTTTCACACTTTTTGGAAAAGTTCACTTGAATTTTCTTTTAGTTTCGTAGATAAAAGGAGTCATCGCTAATGGAAATGAACAATTCAGGTAAGCTTGTTTCTTTGTGTGGAGGCAAATCAGGGAGGAAATAATATGTTTGATATTGTAACATTGGCGAGAAT

# Questionable array : NO	 Score: 6.20
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:66.67%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,4.5   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//