Array 1 1361806-1361222 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072254.1 Parabacteroides distasonis CL03T12C09 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 1361805 47 91.5 30 A......C.......................GA.............. TTCTCTGCGTTTTGGTTCAATGCGATTGCA 1361728 47 100.0 30 ............................................... ACAACAAGACTGTACTCGAAGGAGGAGTTA 1361651 47 100.0 30 ............................................... ATTCGCTTAAAGCATGAGCCGATACGTTGA 1361574 47 100.0 30 ............................................... TGGGTTTGATATACATGACACCCAAAAGGA 1361497 47 100.0 29 ............................................... CTTTCTAGGAATTCATTATACTCCTTAGC 1361421 47 100.0 30 ............................................... ATTACTATGAGATCGACGAAAAATATAATC 1361344 47 100.0 29 ............................................... CTGGAGATCCAGGTGCTAATGCACAATTC 1361268 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 8 47 98.9 30 GTTGTGATTTGCTTTCATTTTAGTAACTTTGAGCCATTGGAAACAGC # Left flank : TCTAAACGCTTGGAGAATCGATTATTTCGAGGCAAGGTACGACTTGCTTCCAAATTCGAAAATATTTTTTCACAATAATCTATTGAACAACGCATTACAAATTTTCACTGATTTATTCTAGCGAAAGATTTCGTCTTCTGTCAACCTCAGTCGGACAAACAAGCGACTTTTTATCTGAAAACAATAAGCTTTTCATCCGAAAACAATCGGATTTCCGGTCGGAAACAATAAGGATCGCAGTCGAAAACAGCATACAACGCCGTTATAAACACCTTACTATTGGATCATAATCCCTCTACAAAGCCTATTCATACACTAAAAAATGGCGAAATACGCTGTTTCCGCCTTCCTTTTCTCTCTATTTTCGCATTTCCATAAAAAGCCTTTATCAGCTAAAAGTCTCCATTTTGAGCAAAATGACAGAAAAAGAGATATTTTGATGACATAAAAGAGAATGGCTTACTTTTTGGTGTAGCTGCCCCAATATTTTGCAATATTTT # Right flank : ATATTATCTATTAAAAACTATTAATCAATGGATTACAAAGCACATCAGAATAAAAAAAACAGATATTGTTTCCATTAAAAATCCCGCTTGACAGCGGGATTTTTCTTTTAGAACAACTCCAATTGCTGTCCAGGAGTATTCACTTCCACCGTTTTCTTTCCATAAAAAAGTTCAATATTCCCAAACTGCTTATCCGTAATACACATGATTCCGACATTCCCATGCTCCGGAAGAAAAGATTTAACTCTTTTTACATGTACGGCCGCATTCTCGCTACTAGCACAATGGCGGACATAAATAGAAAACTGAAACATCGTAAATCCATCTCTTTGTAGATTTTTCCTGAAATCCACATACGCCTTTTTCTCCTTCTTCGTCTCGGTAGGCAAATCAAACAACACAAGTACCCACATAACACGATATTCGCTAAACCGATCCATATTACATTTCCGGATAGGAGATTCTACGCAATTCGCCACTAAAGCACTTATACAGAGAAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTAACTTTGAGCCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.83%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 2057873-2056180 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072254.1 Parabacteroides distasonis CL03T12C09 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 2057872 33 100.0 32 ................................. ATAAAGGATTACCGATACGAATCTCCTTGAAA 2057807 33 100.0 34 ................................. GCGATGTGGACGGTATCTTCGGCGGTTCCCCGAA 2057740 33 97.0 33 ................................G GGTGATGTAGCCGGTATCCCGACCAGTAAAACA 2057674 33 100.0 33 ................................. CGCCCTCGCTGTTCACCGTGCCGGGCAGGTCGA 2057608 33 100.0 31 ................................. AGATGGTTACCTTGATCACCGGGTTCCGGGG 2057544 33 97.0 33 ................................T TTGGTTGAGTTGCTATTCGGATTCCAAGCGTAT 2057478 33 100.0 33 ................................. AGCTTTTAGGTACCTTGTTGATCGACCGTGTGA 2057412 33 100.0 33 ................................. GTTAGAGGAGGCTGTGTTGGGTGCGTTGATGCT 2057346 33 97.0 32 ................................T GAACCATCATGGAGTTGTTCTACTTCCCCATC 2057281 33 97.0 32 ................................T AGCTAGTGTTAAACGATTCGTCGAGAATGGGG 2057216 33 100.0 32 ................................. TGTCAGTGTGCGGCGTGCGGAAGACATATTGA 2057151 33 100.0 35 ................................. TTCAAATCACTTGGGACTTTTCAGTGAAGACATTG 2057083 33 100.0 34 ................................. ACAGCACGCCGCAAGATACGACGGATTACATAAC 2057016 33 97.0 37 ................................G ACAGAACTGTGGACGGTCTGTGCCTCGATATACGAAG 2056946 33 97.0 33 ................................G ACAGGTCATGGTGGGGTTCGCCTTGGAGACGAA 2056880 33 97.0 34 ................................G ATTATGAGATTATTGGAGGAAGTTAATACCACCA 2056813 33 100.0 33 ................................. AACATGGAGATCATGACCTTGCACGTAGATGAT 2056747 33 100.0 35 ................................. TATCCACCCCCTTTGTATTACATCGTTATACGTTA 2056679 33 97.0 35 ................................G ATTATGAGATTATTGGAGGAAGTTAATACCACCAA 2056611 33 100.0 34 ................................. GGATACTGAAAACGGAGAATAACAATCATGGCTA 2056544 33 97.0 34 ................................C ACGTGGAACAAAGTAGCGGAAGGTCTTAGGCTTT 2056477 33 100.0 32 ................................. CAATACCCAAAGCGTTTATGAGTATTACCTAA 2056412 33 97.0 34 ................................T TACCATTGGTCGAATACCCGATCTTGACAAGACC 2056345 33 97.0 33 ................................C AAGTCATCCACGTTTTTTTGAAACTCCGGATGA 2056279 33 97.0 34 ................................T TTGGTAAGCTCAACGTAAAACTCAATTTGAGACT 2056212 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 26 33 98.6 33 GTCGCACCCCGTGTGGGTGCGTGGATTGAAACA # Left flank : TGATAATTATCCGGTATTTCTAATAAAATGATTTACGATTATGCATATTCTTGTGACTTATGATGTGGATACTACGAGCAAAGAAGGAGCTCGCCGCCTACGACATGTGGCTAAGGCTTGCATAGATTATGGCCAAAGGGTACAGAATTCTGTCTTTGAGTGTGAGGTGACAGAAGCACAATATTGTCTCTTGATTGAACGAATCAAGCGTATTATTGATATGTCTCTTGATAGCGTTAGATTTTATATTCTCAATAAAAACGAGAATAAAAGGGTAAAAGTGATAGGTGTTGAAACTGCTTACAAAGTTAATAATGCTCTTATCATATAATTTATGCGAATGTGGAGTATTACGAAAAAAGTAGTATTTTCGCACCCCTTAATAATTAGCAGATTAACCCGTCTTTAAGGCGATTGCAGCCATTAAGCTGAAATAAAAATGAGAATTCGCATATTAATAGGTCTAATTTATTGACTTATAATATGTAACTTTGCACACT # Right flank : TTTGTAAAGCGCAAGCTTTTTCATAAAAGATATACTTACGTGATGAAGTATATCTTCTATGGGACTTGAAGTGTTCTTCTGCGACGAAGGGATTAGTACTTCGTAAAAATAACTTTTTAAAGTCACTGACTCTGACATATAATTTCGCTTAGTTATTTCTGCAAAAATCATTCATATGTAAACAAGTTTCGTATATTCGCGACCTTATAATAGTTTAAATATGGCAGAGGAACTACGGATTAAAAACGGTGATAAACAGGAGATGTATGAGACATTGCTCCCGCAAATCGCCTCATTGGTAGGTAACGAGACCGACCTAATCGCTAACATGGCGAACATCGCCGCAGCACTCAAGCAGACTTTCGGTTTCTTTTGGGTAGGTTTCTACCGGGTCATAGACAATCAGTTGGTATTAGCGCCTTTTCAAGGCCCTATCGCCTGTACACGTATAAAATACGGAAAAGGGGTATGCGGCACGGCCTGGAAGGAGGCTCGTACGA # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.86, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCGTGTGGGTGCGTGGATTGAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.60,-4.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //