Array 1 3501187-3504159 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFBBF010000001.1 Chryseobacterium sp. JUb44 Ga0439395_01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 3501187 47 76.6 30 AAAAGTTG....C..A......................C........ TTCAAGACTTCCATCAACAGACCGGAATAA 3501264 47 100.0 30 ............................................... AATATATCTGCTGATGGTGCATTTGTCCAA 3501341 47 100.0 30 ............................................... TTTTATGTTTATTTATATCATGCGATACGG 3501418 47 100.0 30 ............................................... AGTGCATAGAGAATTCGTATAACGATATTA 3501495 47 100.0 30 ............................................... CATAGCTTGCACCAGTAGGTCTATCCGAAC 3501572 47 100.0 30 ............................................... AAACTTAAAATATTACCTAAAACAACTTGA 3501649 47 100.0 30 ............................................... ACCAGTAAATCAGATGAATGCCGGTCATTA 3501726 47 100.0 30 ............................................... ACGTCGAAATTCTCAGTACCTACGTCTACG 3501803 47 100.0 30 ............................................... TAAATTTTAGATATGTTAAATTGGCCGTTA 3501880 47 100.0 30 ............................................... AAACGATATCAAAGGAATCATTGATTATGC 3501957 47 100.0 30 ............................................... ATCAGTTGAACCCGTCGGCGACACTTCAAC 3502034 47 100.0 30 ............................................... CTTTTTAATATAGACTCTGGAGGCGGACAA 3502111 47 100.0 30 ............................................... ACTTCCAACCGTCCGCATTAATCAGGACCG 3502188 47 100.0 30 ............................................... TTTATGTCTGCCATAACGGGATTGACCATA 3502265 47 100.0 30 ............................................... TTTATGTCTGCCATAACGGGATTGACCATA 3502342 47 100.0 30 ............................................... GCCAACCCGTTCGGTGAATAAGGAAGCATA 3502419 47 100.0 30 ............................................... ATCTTCTATAGAAGGAAATACCGATTCGTC 3502496 47 100.0 30 ............................................... AAAGATGGGCTGAACTTGCAAACCGAGGCG 3502573 47 100.0 30 ............................................... CTTCTGGCAAACCAGAGGTAAAATAATCAT 3502650 47 100.0 30 ............................................... AAAGATGGGCTGAACTTGCAAACCGAGGCG 3502727 47 100.0 30 ............................................... CTTCTGGCAAACCAGAGGTAAAATAATCAT 3502804 47 100.0 30 ............................................... AACCATACCTTCAGTTCCAAGAGGCCACGA 3502881 47 100.0 30 ............................................... AGCCGGTTATAACTCTGTTTAGATTTTACC 3502958 47 100.0 30 ............................................... CTCTGAGGAAAAGGAAACCGACCCAGCCGA 3503035 47 100.0 30 ............................................... TCTAATAATAATAGTAATACTAGTAGTGAG 3503112 47 100.0 30 ............................................... AAAAACTTAACTATTCTGTTGATTTTTGAA 3503189 47 100.0 30 ............................................... CCCAATCCTTTCGCATTGTTGGCGCCAGCT 3503266 47 100.0 30 ............................................... AAGGCTTTTAACTTGTTTAATAATGCGTTT 3503343 47 100.0 30 ............................................... TAATTCTATCAACTGACAGACTGGAAGCGG 3503420 47 100.0 30 ............................................... TAAATATTCTCATAATGCTTTTTAATTATA 3503497 47 100.0 30 ............................................... TGATTTTGATTTAATACACGCTTTCCCAGC 3503574 47 100.0 30 ............................................... TACCTTGAGCTGCGGATGAATAAGAAAACC 3503651 47 100.0 30 ............................................... ATTATTTTTTAAAGTCTTAATGTTGTTATC 3503728 47 100.0 30 ............................................... TCTTGCATTCTATGGACCGTTAATGTATAG 3503805 47 100.0 30 ............................................... TTGTCCCATTTAGTAGGCTCGCCACTCATA 3503882 47 100.0 30 ............................................... CTATAGAGCTATCAGGGTTGATGGTGATGG 3503959 47 100.0 30 ............................................... CTACTTTATCGCCTACATGAACGTGACCCT 3504036 47 100.0 30 ............................................... CCTTCGAACGCAGGGTTAGGAAGATCCATA 3504113 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 39 47 99.4 30 GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATAACACAAC # Left flank : CGGATTAACAATTAATTACGAAAATGGAATTCCAACCCCATACATCCGTCAAGCAAAAGCGAATGTTTATCTGGATGAAATGCTAACTGATGCAAGTACTCTTACCGGCTTATCGGCAGATAATATCGCTATGGTAAAAATTATTAAAGACGGTGCAATTGGTATGAGTGGCGGTGGTAGTGGCGGTGTACTGATTTATACCAAAAGAGGAGATATGAAACCTGTAGTCAAAGCAAATACACTTTCAGAAATGGTTAACCTCAACTTTTTTGTGATGGAAGGTTATAATGAATCTGAAGGATATCCCGATTCTGATTATGGAAATTCTGAATTATCTAAAATAACTAGCGATTACAGACCCGTACTCTACTGGAATCCCAATGTGGAAATAGATCCGACTACTCCCGCAAAAGTTGATTTTTATAATAATGATACTGCAAAAAAATTCCGATTTATAATTATGGGATTTGATGCTGAAAAATATACGCCTGTTTACTATG # Right flank : CCTCAAAAGCTAAACCTACTGTTTATCAGTAGGTTTTATTTATTTTTAGAATTCCAAATTTTGCATTTTTGGATGGGGTTTAAAATTGATTTTTGTTATTTTTTAATTCGTAAGAATCCCATTAATTATTGCAACAATCACAAGACTTACATTATTACCCAAACTTGATATCTCATCAATGCTTTTAATGAATCAAATACTAAAAGAAAAACTGGTTGTAATCAAAATATGATGATTATAATAATTTAAAAAAATATATAAGATATTTCATTGGTAAAGTATCAAGTTTTAAAACAATTCTAATTGTTGGAAGGTAGGCGGTGGTTCTTCTTTATTCCGAGCAAAGAAAATTTCTATATCTCCAAATTGTTTGTCGGTAATGCACATAATGGCTACTTTTCCTGCTTTTGGGAGCATAAACTTTACTCTTTTAATATGAACCTCAGCATTTTCACGGCTTGGGCAATGACGAACGTACATTGAAAACTGAAAGAGTGTAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATAACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATAACACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //