Array 1 287-545 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADWMQ010000269.1 Streptomyces sp. HB-N217 NODE_269_length_5320_cov_92.148277, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 287 36 100.0 39 .................................... CCACTTGGTCGCCCACCTTTACGGCTTCCGCGACCTGAC 362 36 100.0 36 .................................... GGTCAGACCTCGAACATCTCGAGCGCGAAGATGGCG 434 36 97.2 40 .......A............................ GAGCTTCCGTTCAAGCGGACGGTTAACGGTTCTGCGCCTG 510 36 86.1 0 .......A......................TCC.C. | ========== ====== ====== ====== ==================================== ======================================== ================== 4 36 95.8 39 GTTTCCGGACCGCGACTGCCCGAAGGGCATAGAAAC # Left flank : GCCACCGCCACCGCCACCTGCCGTCCCGATCCCGGCACCGGAGGCACGAGTGCCCCTCTTCGCCTCTTCGCCCGAGGTCGACGATGCCGTCGCCGCCGAGACGGCCGTAACCGCTCTCCTGCAAAGCAGCGCCAACCACGAGATTCCTGCGCGTGCCGTTTCCGCACGTCAACAATGCCCTGAGGGTTCGCTGTGACCTGGGTCACCATCACTGAGGATGCGTGGCGAACACTCCTGCGCAACGGGCATCATCGTCCCAGGTCACCAGCAGCGGAAACCGGGAAGAG # Right flank : CAGCCCCTGGCTCGCCTTTCTGAAAGGAATTCCCATGGGGGATCTCCTGCACCGTGCCATATCCGAGTCATCGCTCCTCGCCGCTTGGCAGGAGGTGCAGGCCAACGACCTGGAGGACGGGAAGGTCAGCGACCAGGTGGCCGAGTACGCGCGTGGTGTCCTCGCGCGGCTCACGGATCTCGGGCGGGAGCTGAAGGCAGGGACGTGGCGCCCGGCCCCCGTGTACGCGATGGAGATCGGCAAGCGATCGGGTGGTACACGGCTGCTCGCCGTGCCCGCCGTGGAAGACCGCATCGTGGAGCGGGCGGTGATGGAGGTGATCGACGAGTATGTCGACGCCGTACTGCTGCCCTGGAGTTACGCCTACCGTAAAGGGCTCAGCGTCAAGGACGCGCTGCACGACCTCGCCGCCGCGCGGGACGAGGGCGCCCGGTGGGTGGTGAGAGCGGACATCAAGGACTGCTTCGAGCAGATCCCCCGTTGGCCGGCTGTGACCCGAC # Questionable array : NO Score: 2.65 # Score Detail : 1:0, 2:0, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCGGACCGCGACTGCCCGAAGGGCATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.00,-7.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 2991-3318 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADWMQ010000269.1 Streptomyces sp. HB-N217 NODE_269_length_5320_cov_92.148277, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 2991 37 97.3 34 ........A............................ CGGTGTCATCGGTCTGGGTCACGGTCCACCCGTT 3062 37 100.0 33 ..................................... GATTACCGGCGGGCGGCGCTCTGCGCGGCAGCG 3132 37 100.0 41 ..................................... ATGGGCAGTGGCCGGAGAGTCTCGATCAGGCCGTGCGCCCA 3210 37 100.0 35 ..................................... TCCTGGCACGGGCCGTCGTGCGGAGCTTTTCCGCA 3282 37 94.6 0 C.......A............................ | ========== ====== ====== ====== ===================================== ========================================= ================== 5 37 98.4 36 GGTTTCCGGACGACAGCAGCCCGAAGGGCATAGAAAC # Left flank : TACGACATCCCTGACGACAGCCGCCGCGCCGACATCTCCGACCTTCTCGCCGCCCACGGCGCCCGCGTCCAGTACAGCGTGTTCGAAGTCACCCTCGCCACCAAGAAGGACGTCCAACGCCTGCGCGGCACACTCCGCCGCCGCATGGACCGCGACGAGGACCAGATCCGCCTCTACCCCCTGCCGGGCCCCGTCCTCAGCGAACTCGTCATCCTCGGCAACCGCCGTCTCGAAGAACGTGCCGACTACTGGATCCTGTAACCGCTACCGTAGAACCACCCAAAGCACTCCAGCCGAGCACCACAACGCCCCTGACCAGCCCGTAACCACACCCCGCCCGACCAACCCCCGGAAGCCAATTCCTGCGCGACGCGTCTCCGCAGCTCACATCGCACGACCCACGCTCATGTGATCCACATCACGGTCCAGAATCGACCCGCACCGCGATCCTGCGCACCAGGCAACATCACCGCAGGTCAATCGGGGCGGAAACTGCGAAG # Right flank : CCATGCCCGAGCGCTGCCCCCCAGAGCCCCGCCCGCGTCCGGGCGGGACCGGGCGGGACCGGGCCTCGGAGCCGTGACCGCGGCTCAGACAGGCAAGTACGGGCTCGGCTTCCCGTACCAGCTGATGCGGAGCGCGTCGCGGGCGCGGGTTGCGGCGACGAAGAGGAGGGAGCGGGCCCTGAGTTCCTCGCGGGCGTGGCGGCGGGGGTCGGTGGTGCGGTAGCGCTCCAGGATGTCCGTGCGGGGGATGACGCCGTCGCGGGCGCCGACGATGGCGAGCTTCTGGTACTCGAGGCCCTTGAAGCGGTGCATCGTGCCGACGTGCACCTCGCCGTCGCCCTTGGGCCCGTCCTTGGTGAGCTCGGCGACGGTGATGCCCGCCTTGGTGGCCAGATGGAACATCACCTGGCTGACCATGTCCCGTTCCGCGACGCACACGGCGATGCTGCCGCGCGGGTCGCGGCGCGGGCCGGTGCCGCCGTTGCCCGTCGCGATCTCCT # Questionable array : NO Score: 2.98 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTTCCGGACGACAGCAGCCCGAAGGGCATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.10,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [36.7-15.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 18231-18442 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADWMQ010000086.1 Streptomyces sp. HB-N217 NODE_86_length_35196_cov_99.870798, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 18231 28 85.7 33 .CAAC....................... CGCGGACTACACGCACTTCAGCGTCGCCCGGCA 18292 28 100.0 33 ............................ GGGCGTGCCCGCCTCGGTCACGCTGCCGACCGC 18353 27 96.4 34 .....................-...... GCCGACACAGGGGGACCGCAGGGCCTCCGGAGGT 18414 28 71.4 0 ...........ATTC.......GG..CT | A [18435] ========== ====== ====== ====== ============================ ================================== ================== 4 28 88.4 34 GTCGTCCCCGCGCCTGCGGGGGTAGCTC # Left flank : GAGCACGCATACAACCGGCGCATCTGTACGAGACGAGTGCCACGGAGTGCCTTCCATACCGGTCGCCACGAGGACGGCTTCGGCGCAAGCGCCGAGCTGCTGGATGCAGGCGACGCGTCGCCCGGCTCGTCGTCGCTCACGCCGGAGCCGACGGTCTGGGCCGGGAACCTTCAGGCGTACTTCCTGCGCGGTGCGGGCCCTTACCGCGCCGGTACGCCGGTGGTCCGGGCAACTGCTGCCGGCGTGCGGTAGCGCTGACGGAGCGGGATGAGGGTCGTGGGCATCAAGGTGAGGACGGCGATCACGGTAGCGATGACGGCGGAGCCAGCCAGGCGCGGAGACGACGAGTCGAAAGCCGTCGTGTCCGCAACTTCTTCGGAGCAACCCCCGCAGGCGCGGGGACGACCGCATCACCGTGCCGGTCATGTGGCAGTCCCTGGAGTAACCCGCAGGCGCGGGGACGACCACTGGACGATGCAGGCGGTGACGATGCGGTCGGA # Right flank : TGAGGTCAAAGCTGTGGCCCTGGCAACGCACCGCTGTTCCCCGCACCCGAACGGGGGCCGGCTGCTACGAAGCGGCACGTTTCGCAGCTGACGGCTCCGAAGCAGGGCCTCCTGAGGATCGCTGACCTGACGCCCGACCCCGTAGGTATTCGTGGCGGTATACTTCCCGGTGTGGATACGACGATCAAGATCGGTGCGGAGACCCGCGACAAGCTCGCCGCTCTGGCCGAGGCCAGGAACATGTCGATGCGGGCGTTGATCGAGGAGTTCGCCGCGACCGCGCTCACACCTGCGCAGTTGCGCGAGCGAGCCGAGCGCACAGACGCGTTCTTGGCCGCAGAGTTCGGGCACCGGGTCAGCGACGACGAAGCCGGCGCGTTGCGTGAGCGGATGCGGCAGGCACAGAACGCCGGACATGCTCGGGTTCGGGGCACGGCGGCGTGATCGTCGAGCACTACGTTCTGGACAGTCGCACACTCCTTGCGCTGGGGGGCAACAAG # Questionable array : NO Score: 3.87 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCTGCGGGGGTAGCTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCCTGCGGGGGTTGCTC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-23.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //