Array 1 45195-47661 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUBE01000015.1 Klebsiella pneumoniae strain 198B9 contig_0015, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 45195 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 45256 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 45317 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 45378 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 45440 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 45501 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 45562 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 45623 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 45684 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 45745 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 45806 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 45867 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 45928 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 45989 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 46050 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 46111 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 46172 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 46233 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 46294 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 46355 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 46416 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 46477 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 46538 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 46599 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 46660 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 46721 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 46782 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 46843 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 46904 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 46965 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 47026 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 47087 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 47148 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 47209 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 47270 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 47331 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 47392 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 47453 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 47514 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 47575 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 47633 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 41 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //