Array 1 57542-57970 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABJAO010000012.1 Clostridium tyrobutyricum isolate MGYG-HGUT-00125, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 57542 30 80.0 35 ....T....TT..AA..T............ AGGTGATATATGGGCAAGTATAGAGCTTCTATGGG T,AA [57551,57556] 57610 30 100.0 36 .............................. AGAACAATCAGAGGGAGCTTCATATAAGTCTAGATT 57676 30 100.0 36 .............................. ATTAAAAGAATGAATTTTAACTAAAGAAAGATTTAT 57742 30 100.0 36 .............................. CGGAAAATACTACCTTGCTAAAATAAGTGGTGATAC 57808 30 100.0 36 .............................. GAATAAAATTTAAAATCATTAAATCCAGTTCTTAAA 57874 30 100.0 37 .............................. GTTTGCAGAATTAAAGAAAATGGGAGCAATTGATATA 57941 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 7 30 97.1 36 ATTTAAATACATCTCATGTTAAGGTTCAAC # Left flank : ATCCTTACTCCGGCGGAAAAGGAAATTCTATAAGATATCTTTCTGTAGCCCCTGTTTCTAATGATTTACACGTACGAGGAGTAGATAACCTATTCTGTGGTGGAGAAAAAAGTGGTTTATTCGTAGGTCATACAGAAGCAATATGTACAGGTTCTCTTGCAGGGCATAATGCAGTAAGATATACTCTTGGAAGACCTGAGCTGGTACTTCCAACTGAAACTGCCATTGGAGATATAATAAGCTATGCCAATTACAAAATTAAAACTGCAGAGGGTAGAAAAAACAGATACACTTTTGCAGGTGCAGAGTATTTTAACAGAATGAAAGAAAAGGGACTATATACTACAGATAAAAATGAGATAAAAAAGAGAATAGAAAAATTGGGTTTAACAGATATTTTAGCAAAGGCTTGATATCAAATTAAAAATTGGTATAGATTTATTCAATATAATTCTATACCAATTTATTTATAATAATTGTCTCTTTAATTAAAATGTTTG # Right flank : CCTGTGTAAAATAGCCATTCTTTAATTTCATTATAAGCTTTGAAAGCATATAAATAAAGGTTTTCGCTGAATTTTTTCCAACCAATTTTTATTATGCATATATTTTATAAGAAATAACGTAACCCATTGATTCTAAATAAATTGAAGTGATTCTAAATAGCAAACAGGTTGGAAAATTCAAAGTATCAAGTTTTCAGTATTTTTATCATTTATACCTAAAGTTTCCTCTTCAAAGCAACTATCATTTATAAGTTTTATGATTGTGACAAAATCCTTATCTGCTACGATCTTATTTAATTCACTTTTTAATTTTATTAATTTAGATGGAGTTATAGATCCTCTAAAAACAGAATTTTGATGATGGTGGAAATACTTTTTACATATTTTAAATATCTTATTCACTCTTTTTTCATTTACATCATAAAATACAAAAGCATAATTAAAATTAAAATTTTTTCCCATTAAACTCCTCCATACTATATCATATTTTTCAAATTAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATACATCTCATGTTAAGGTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 10936-11226 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABJAO010000039.1 Clostridium tyrobutyricum isolate MGYG-HGUT-00125, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 10936 30 100.0 35 .............................. TTTAAGCTGATATTTTAAATTTGCCACAGTTTTTA 11001 30 100.0 35 .............................. AGATTTTCCAAGTATTCGTATTGGAAAAAATATTA 11066 30 100.0 35 .............................. GAGGTGGTTGATTTCAACATTATTTAAACTCCTTT 11131 30 100.0 36 .............................. TACATTCTACGTACAGGAATAGCTTCATCAACTCAA 11197 30 93.3 0 ..............C.....G......... | ========== ====== ====== ====== ============================== ==================================== ================== 5 30 98.7 36 GTTTTAATTTATACTATGTTAGTTTTAAAC # Left flank : TAGATATAGATAATGTATCCAAGTTCTCCATTAGTTCAGAGGTAAGTGAGTTTAGAGATTATACTCCTGAAGAAATAAATCAAGATGATATTTCTCTAGATAAAAATGAAAGGCTTAATAGAATAACTTCATGCCTAAAAGGGCTTGAACACCTAAAAATCAATGGAAACCAAGCTAATTATTTAACTGACACATCTCTAAAGTTTATAATCTTAGGAGAATTTTCATGGGGAAACAATGCTTTTCAAGGTGTAATAAATAAAGACGGACTTGATACAGACGCCTTATTTGAAACTTTAGCAGATAATAGTAAGTTTCAGCTAAGTCCAATATGGATAGCGGTTAGTGATAAATTAAAGGATAGTAAGATTAAAGATTCCTTTCTTGAAATAAAAGATGATATACACTCTAAATATCCAATTAATATATGCAGTTCTGTAGGCAATGCTATTGATAGTTATATTTCCTACCTTGAAAAAACATATATATAATTTTTTTAG # Right flank : CTATAAGGAAATTCTATGAAATGGAGGATAAGATATGAACTTTAAAGAAAAGCTAAAAAGTTACAGAGAAAAGAATAAATTAACCCAAAAACAATTAGCAGACAAATTAGGTATATCTAGATCAGCTATAGCTGAAACAGAAAGAGGAGCTATAAAAGGAACTTTAGAGTTTATAAATAAGCTCTCTAAAGTAAGTAATCTGTCAATCACTTACTGGATTGAGGATATTTCAGATATTACCTACAAATCTTATCAAACATTATACATTCTTATAAATGCTATGATTGAAAATGGGTTAATAAAAGATGATGGCAAAATTCCAGATAAATATAAGGATATTGTTATTTCTGTATTAGAGCAAGAAATAAAATTAAAAATTAATGGATTAAAGGAGCCATCTTAGTTATACTTCCATTACCCCAACATTGTAAATATCTATAGTAAAAAATGTCAGTTTTAAACCAAGGAAATTCTATGAAATGAGGATAAGATATGAGCTT # Questionable array : NO Score: 3.00 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATTTATACTATGTTAGTTTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 142164-142655 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABJAO010000005.1 Clostridium tyrobutyricum isolate MGYG-HGUT-00125, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 142164 30 100.0 36 .............................. GGATGATGTCCAAGAAGGCGATGGAGAGGATGAATA 142230 30 100.0 37 .............................. CTTGACATACTGGTAATGCAATTCAATAACTATAATT 142297 30 100.0 37 .............................. ATAATTAAAAGTTTGCTTTAGAAAAGAGGTGAGAAGG 142364 30 100.0 34 .............................. TCAAATGACATCATTATTTCTGGCTTTTCAATAA 142428 30 100.0 35 .............................. TATCATCCTCCTAGTACCTAATAACAAGTAATCTA 142493 30 100.0 36 .............................. AATACACCTTCAACTTTTATTTCAACTTTATTTCTA 142559 30 100.0 37 .............................. TTGAACTTTCATCACACATAAGAGTAAAATCTTTTAA 142626 30 93.3 0 ............................TG | ========== ====== ====== ====== ============================== ===================================== ================== 8 30 99.2 36 GTTGAACCTTAACATGAGATGTATTTAAAT # Left flank : ATCTGCAATTCGGCGAAAATGAAAAAGCACTGGATATGCTTCATAAGTGGATAGACTACATATCAGTCAATAATATAAACAAGACAAAGGATTTCACAAATATATGGTGCTTTAATGAACTCCCAGGTGGAGATGATAAACTCACTTCGAATTTATGTGAAAGTATGTTTAAAATCTTAGAGGACTCTCTATTTGATCCAATAAGAGACAGTATTGATTTTAAATCCATTGTAGCTAGATTGAAAAGTATTGCTGATAATTAAACTTTAACTGTATAAGATAAAGCCTGTCTGGTCTTAAGGTAATTTTATTATTTTAAATTAATTTTCCAATCAAAATCATTGATAATACTCTGGTAAATATTGATATAATTAAGTTTAGAGATATTTTTTATTGTCTCAATAGGGAAATGCAAAGTGGTTGGAAAAATTTTATGAGATGGCTTTATTTTCAATGGTTTAGGAGTTATAATGGATTTAGAGAATGGCTTTTTTACTGTG # Right flank : GAAATGCACTTTCTTTTATTAGGTGTGCATTTCATTAAATACATTTCTAAATTTTAGCATATATAATTTAATATTTTTATATAAACAATGACCATAGCCAAGTTAATTTTTTAGGTATTCCTATAGAAATTGTTATAAAAATTGACTTTATCAATTTTAAAATTTCAACTGTATAATCTCTATATTTTATGATATACTATTAGTAATAAGAGGGTGGATTACGAATTTAGTCTGCTTTATATTTGTATAAGTTTTAGTAAATAATAGATAGCCTTTGCGATAGCCTATCTATTATTTTTTTTGGAATTATTTATGTTTACTTTAGTATCAGATGATATTTCATCAGGTCTCAAAGTAATTTTATTATCAATTTTTATATCTGACTTTTTGTTAGATAGTGCTACTATAACTATAGCAGTTATTGAAAATAAACCAAAGAACAATAATAAATATTCTTCTATCATAAATTACCACCTCTTCTTCATGCGCAGACATTATTA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 143550-143713 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABJAO010000005.1 Clostridium tyrobutyricum isolate MGYG-HGUT-00125, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 143550 32 100.0 34 ................................ TACGTACTGCATTGCCCAAACTTGTGTAGCGATT 143616 32 100.0 34 ................................ GTTAAACTCCTGCTTATAAAATAAAAGTGCTATC 143682 32 75.0 0 ...............A.G.......AGGCCA. | ========== ====== ====== ====== ================================ ================================== ================== 3 32 91.7 34 GTTGAACCTTAACATGATATGTATTTAAATTT # Left flank : TAGTGCTACTATAACTATAGCAGTTATTGAAAATAAACCAAAGAACAATAATAAATATTCTTCTATCATAAATTACCACCTCTTCTTCATGCGCAGACATTATTAACCGTAATCCACCCACAAATAAAGAAGAGGTTCCTATACAATCATCTTATTACGTTTAAATTATATCATATACTTTGATTACTGAAAACACTATTTGAAGTAACTGTATTAAATAACTATTTTATGCATAAAAACGGTTATCATGGAAACTCACACCATAATAATAACTTGCTCAAACTTGTTGATAATTAAATATTTTCTACATTTATATTAAACTAATTTTCCAATCAAAATTATCGATAATACTCTGTTAAAAGTTGTTACAATTAAGTTTAGAAATATTTTTTATTGTCTCAATAGGGAAATGCAAAGTGGTTGGAAAAATTTTATGAGATGGCTTTATTTTCAATGGTTTAGGAGTTATAATGGATTTAGAGAATGGCTTTTTTACTGTA # Right flank : TTGAGCTTAATTTAACAGCATTGGTGGCGACAAAATATTAATTCTATTATTACAACCATGGTATATGTCACTTTGATAAGAAAGTAATTCATGATCATCAATTATTTTTCTGTAGTCTTTATAGTAATCGTTGTCATAGAAATACAAGAAATCTATTTTCCGGGAAATAATTGAAACTTTGAATCGAATGTTGAGAAATTATTGAGAAATATAGTAAAATGATTAATTTCTCACTTAATCAACATTCTTACATTTTGTTTTAAATTATTTGTTATTATTTTTAATTTTTCAGAGCCTTTTCCTAAAATTTTAATTATCATACAGCTGTCGCAAGTAATAGTTGCACCAAAATCAATATCATCATAAGTGTTTAAAAATTCAACTATATAATCTTTTAGCTGTTCATCAACGTTATAGTTAAACACTATAACGTTTGCCTGATGAGTATATCCTTCATAAAATCCAATTTCATTTAACTTCTGAATTTCTGGATTTAAAAA # Questionable array : NO Score: 4.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.59, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATGATATGTATTTAAATTT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:78.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //